Helicoverpa zea (corn earworm): 124637639
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Entry
124637639 CDS
T08400
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
hze
Helicoverpa zea (corn earworm)
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hze03021
]
124637639
03036 Chromosome and associated proteins [BR:
hze03036
]
124637639
Transcription machinery [BR:
hze03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
124637639
Chromosome and associated proteins [BR:
hze03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
124637639
SLIK complex
124637639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
HDA2-3
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
124637639
NCBI-ProteinID:
XP_047030243
LinkDB
All DBs
Position
1:8672936..8685060
Genome browser
AA seq
1796 aa
AA seq
DB search
MHLKGFMNESGSDSNSDKGEKSDSSGSGSGSESESGSSSSGSGSERSGSEKSFNRSHHSD
DTKSSPKHSHANSSKSDHHTDKNSSDDDSPTKSRSRNSKLKSDLWEDNPDIYGIRRSARS
RKEPDRLKLADSDSSERGRTHSRKSRKKSDSWNSDSSDSDSDLKGSPPPPSKRPGQRSVP
LRKRKPTRRRFTSDEDESSEGTDDETKRTATRRTGAAVSYKEASDEQTDSSDLLEVEGVD
GEAEAEPEPEDHSETIERVLGVRRGKKGVTGNVTTLYYIEEHGDPNADCNPDDADSTEPQ
YLIKWKGWSHIHNTWESERSLNEQKVKGLKKLENYIKKEAELSWWRQQAGPEDIDYFECQ
NELQQELVKTYNNVERIIAEQTRELEGGGTAHEYFCKWESLPYADATWEDAILIEKRWPQ
EVEHFKYREAAKTTPSRHCPVLRRRPKFHHVKEQPEYMGKDASFVLRDYQMDGLNWLIHS
WCKDNSVILADEMGLGKTIQTICFLYYLFKSQQLYGPFLCVVPLSTMTAWQREFEQWAPD
INVVTYIGDLSSREILRQFEWSFASSKRLKFNAILTTYEILLKDRQFLRSFSWACLLVDE
AHRLKNDDSLLYKALKEFDTNHRLLVTGTPLQNSLKELWALLHFIMPYKFESWEEFEKDH
EDAATKGYEKLHKQLEPFILRRQKKDVEKSLPAKVEQILRVEMTSIQKQYYKWILTKNYS
ALRKGVKGSINTFINIVIELKKCCNHALLTKPEDFESRASLATTDAVEKLLRGSGKLLLL
DKLLCRLKETGHRVLIFSQMVRMLDILAEYLQRRHFPFQRLDGSIKGEIRKQALDHFNAE
GSTDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLV
TARSVEEDIVERAKRKMVLDHLVIQRMDTTGRTVLNKRDASATSANNPFNKEDLNAILKF
GAEELFKDDDENDEDPVCDIDEILQRAETRDEGPSMAGDELLSAFKVASFAFDEDKAVME
VKKENAEEESKDWDDIIPENVRKTIAEQEKNKEMEDLYLPPRRKNLQANNADGSEGRKRR
GRGSAEGGDGAELDGDAESDGTDGGSDDDRPRKRGRPPASHREKIKGFTDQEIRRFVKSF
KKFSAPLKHLDSIACDAELQEKPLAELKKLGEILQERCKAVLNDTSEVANEQTEGRKNAR
KTFKLGGVPVNAKTMAACQDELAPLDVFLPDTKEERLKWQLDFRTRPANFDVEWGVADDS
KLLAGIYQYGMGSWEAIKMDSSFEIGDKILTNEDKKPQAKHLQSRAEYLLKLIKKLQDQK
NGKQKQRKPRTKRGQKEPVTKDIVEDDGSSGDENKKSNKTGKNDKSDKNKSKLEDVSTHD
ETSNDRKERDKKRAKRDGNRKSDKMKSRNKKPAGPMHFTANNEPRALEVLGDLDPSVFEE
CKEKMRPVKKALRALDNPDQTLSEADQVARTRACLTQIGNQIDICVDAYPDPEKKVEWRS
NLWYFVSKFTNFDAKQLYRLYKYGLKKNESSSKKDGKHKENVKNNKNNHNSNHVKSYKKD
GKADNANDKKEKRPKTDRDKFDKANDKHPQTSGIKRKLEEGECDPEPSENKRHERHKHKH
KDRKDRDRSLKRDDLMYRERSRSERERDRDRERDRDRERDRERDRDRDRERSRTRRDSGG
LAPRSRPPYAMPHPHPDHPAHPAWTPPAYPGPRQYRADRTPRPHDKRSRYSGFGGMPGPY
GAYYDSASMAGSMGFPPARPYPDDWRGYTQPEYAYDERDYEREVYRRDYDRRAPPT
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgcacttgaagggattcatgaatgaatctggaagtgattcgaatagcgataaaggtgag
aagagtgattccagcggctcaggttcaggtagtgaaagtgaaagtggatctagttcatca
gggtctgggtctgaaaggtctggatctgagaaatcttttaacagatctcatcacagtgat
gacacaaaatcatcaccaaagcacagtcatgcaaactcatcaaaatctgatcatcataca
gacaagaattcttcagatgatgattctcctactaaatctagatcacgaaatagcaaatta
aagtcagacttatgggaagacaatcctgacatttatggaattaggagatcagccagatca
agaaaggaaccagatagacttaaattagcagatagtgattcaagtgaaagaggcaggact
cacagtagaaaaagtagaaaaaaaagtgattcatggaattcagactcttctgatagtgat
agtgacttaaaaggttcaccacccccaccctccaaacgaccaggccaaagaagtgtacct
ctcaggaaaaggaaaccaactcgaagaagatttaccagcgatgaggatgagagttcagaa
ggcactgatgatgaaaccaaaaggacagcaacgcgacgtacgggcgccgcagttagttac
aaagaagcgagtgatgaacaaaccgactcctctgatcttttggaagtggaaggcgtggat
ggtgaagctgaggcggaacctgaaccggaagaccatagtgagactattgaaagggtctta
ggcgtccgccgagggaaaaaaggagtcactgggaatgtgactacactttactacatagag
gaacacggagatcctaatgccgattgtaaccctgatgatgctgactcaactgaacctcag
tacctgatcaaatggaaaggctggtcacacattcacaatacatgggagtccgaaaggtca
ctcaatgaacaaaaggttaaaggtcttaagaaattagaaaattatataaagaaagaagct
gaattatcatggtggaggcagcaggcgggtcctgaggatatagattattttgaatgtcaa
aatgagttgcagcaagaattggtgaagacttacaataatgtagagaggataatagcggaa
caaacgcgggaactagaaggcggcggtacagcacacgagtacttttgcaaatgggagtca
cttccatatgcagatgccacttgggaagatgcgattttaatagaaaagagatggccacaa
gaagtagaacatttcaaatatagagaagccgccaaaacgacgccatctcggcattgtcct
gttttgaggagaaggcctaagttccaccatgtcaaggaacagcctgaatacatgggaaaa
gatgcgagttttgtgttgagagactatcaaatggatggattaaactggttaatacattcc
tggtgtaaagacaactctgttattcttgccgacgaaatgggtttaggtaaaactatacag
accatttgttttctatactacctcttcaaatcacaacaactttatggaccattcctatgt
gttgtgcctttaagtacaatgacggcgtggcagcgagagtttgagcagtgggcgcctgat
attaatgttgttacttatattggtgatctcagtagtagagaaatcctcagacaatttgaa
tggagtttcgctagctcaaaaagactgaagttcaatgccatcttaactacatatgagatt
ttactcaaagatagacaattcctaaggtcctttagttgggcgtgcttattagtagatgag
gcacacaggttaaaaaacgacgattctctattgtataaagcacttaaggaatttgataca
aatcataggttactggttacgggtactcctctacagaattccttgaaggaattatgggcc
ttattgcattttatcatgccttataagtttgagtcttgggaagaatttgagaaagaccat
gaagatgctgccactaaaggctacgaaaagttacacaaacaattagaaccatttatttta
agaaggcagaagaaggatgtcgaaaagtcattgcctgcgaaagtagaacaaatcttaaga
gtagaaatgacttcgattcaaaagcaatactataaatggattctcaccaaaaattatagt
gcccttagaaaaggagtgaaagggtctataaatacattcataaatatagtaattgagtta
aagaaatgctgtaatcatgccttattaacgaagcccgaagattttgaatctagagcatca
ctcgcaacaactgatgctgtagagaaattattgaggggttcgggaaaattactcctatta
gataagctgttatgtaggttaaaagaaacaggtcatagagtgctaatattttcacaaatg
gtcagaatgttggacattttggctgaatatttacaaagaaggcattttcctttccaacgt
cttgatggcagtataaaaggtgaaattagaaaacaagctttagatcacttcaatgctgag
ggttcgacggatttctgtttcttattgtcaacacgcgctggaggtcttggtatcaacttg
gccaccgccgacaccgtcattattttcgattcagattggaatcctcaaaacgatttgcaa
gctcaagcacgagcgcatcgtattggacaaaagaaccaggtcaacatttatagattagtt
actgctaggtcggtagaagaagatattgtggaaagagctaaaagaaaaatggtgcttgat
catctcgttatccagagaatggacacgactggccgaactgttctcaacaagcgtgatgcg
tctgcgacaagtgccaataacccattcaataaagaagacttaaatgcaatattgaaattt
ggtgctgaagagttatttaaggatgatgatgagaatgatgaggatcctgtctgtgatatt
gatgaaatcctgcaacgagctgagacccgcgacgaaggtccttctatggcgggagacgag
ttgctgtcagctttcaaagttgctagtttcgcatttgatgaagacaaagctgtaatggaa
gtcaagaaagaaaacgctgaagaagaaagtaaagattgggatgatattattcccgaaaat
gttcgcaaaacgatagctgaacaggagaaaaataaagaaatggaggatttataccttcct
cctaggagaaagaatttgcaagctaacaatgctgatgggagtgaaggtcgcaaacggcgc
ggtcgtgggtcggcggagggtggcgacggcgccgagctggacggagacgccgagagcgac
ggcacggatggaggctccgacgacgaccgcccaaggaagcgaggccgaccacctgcctcg
catagagagaaaatcaaaggctttactgatcaagagattcgaagatttgtcaagagtttc
aaaaagttttcggcacccctaaagcatctagatagtatagcgtgcgatgcagaattacaa
gaaaaacctttagcagaactcaaaaagttgggagaaattttgcaagagagatgtaaagcg
gtgctaaatgatacatcagaagtagcaaatgaacaaactgaaggccgtaagaatgctagg
aaaaccttcaagcttggtggtgtaccagtcaatgccaagacgatggcagcgtgtcaggac
gaactggcgccgctcgacgttttcctgcccgacacgaaagaagagaggcttaagtggcaa
ttggactttaggacaaggccggcaaacttcgatgttgagtggggagtagcagatgattct
aaattactagcaggaatttatcaatatggtatgggatcctgggaagctattaaaatggat
tcatcctttgaaattggagataaaatactcaccaatgaagataagaaacctcaagcgaag
catttgcaatcgcgtgcagagtatttactgaaactcataaagaaattgcaagatcaaaag
aatggcaagcaaaaacaaagaaaacctcggactaagagaggacagaaggagcctgttacc
aaggatattgtagaagatgacggtagttctggagatgagaataagaaatcaaataagact
ggtaaaaatgataaatctgataagaataagtcgaaattagaagatgtgtccacccacgac
gaaacatcgaatgaccggaaagagcgagataaaaagcgagcaaagagagatggcaatagg
aaatctgacaaaatgaagtcgcgcaacaagaagcccgcgggccccatgcatttcactgcc
aacaatgaacccagggcactggaggtactcggcgacctcgacccttcagtctttgaagag
tgtaaagaaaaaatgaggcctgtgaagaaagcattgagagctctagataatcctgatcaa
acattatctgaagctgatcaagtagctaggacgcgagcctgcctcacgcagatcgggaac
caaatagacatatgtgtagacgcatatccggatcccgaaaagaaagttgagtggagaagt
aatctctggtactttgtttccaagtttacaaactttgatgcaaagcagctttataggtta
tataaatatggactgaaaaaaaatgaatcgtctagtaagaaagatggaaaacataaagag
aatgttaagaataacaagaataatcacaatagcaatcatgtgaaatcatataaaaaagat
ggaaaagctgataatgctaatgacaaaaaggagaagaggcctaaaacagaccgagataaa
tttgataaggccaacgacaagcatccacagacgtcgggaataaagagaaagttagaagaa
ggcgaatgtgacccagagccgagtgaaaataaacgtcatgaaagacataaacacaagcac
aaggatcgcaaggatagggataggagcctgaagcgggacgatttgatgtacagagagcgg
agcaggtcggagcgggagcgggaccgagaccgtgagcgggaccgagaccgggagcgcgac
cgcgagcgtgaccgcgaccgcgaccgcgagcgctcccgcacgcgccgcgacagcggcggc
ctcgcgccgcgctcgcgcccgccctacgccatgccgcacccgcaccccgaccatcccgcg
caccccgcctggacgccgcccgcctaccccggcccgcgccagtaccgcgccgaccgcacg
ccgcgcccacacgacaagaggagcaggtacagcggcttcggcggcatgccgggcccgtac
ggcgcgtactacgacagcgccagcatggcgggcagcatgggcttcccgcccgcgcggccc
taccccgacgactggcgcggctacacgcagcccgagtacgcgtacgacgaacgcgactac
gaacgggaggtgtaccgaagggactacgaccgacgcgcacctcccacgtaa
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