Idiomarina abyssalis: K5X84_02045
Help
Entry
K5X84_02045 CDS
T07548
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
iab
Idiomarina abyssalis
Pathway
iab00470
D-Amino acid metabolism
iab00550
Peptidoglycan biosynthesis
iab01100
Metabolic pathways
iab01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K5X84_02045
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K5X84_02045
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
K5X84_02045
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
iab01011
]
K5X84_02045
Enzymes [BR:
iab01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
K5X84_02045
Peptidoglycan biosynthesis and degradation proteins [BR:
iab01011
]
Precursor biosynthesis
Amino acid ligase
K5X84_02045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp_3
CPSase_L_D2
GARS_A
Motif
Other DBs
NCBI-ProteinID:
QZN91327
LinkDB
All DBs
Position
407661..408590
Genome browser
AA seq
309 aa
AA seq
DB search
MNAETFGKVAVMLGGSSAERDVSLKSGMAVLKGLVAKGIDAHAFDPAAHSLQELVDDGYE
RVFIALHGRGGEDGAMQGALQVLGIPYTGSDVLGCALGMDKVRCKQIWHALGLPTASWRV
ITQEEIEQVNAEALLLELGGRVIVKPAREGSSIGMSSADSAPRLAAALKHAAQFDDDILV
EQWIEGPEYTIGLLDGNALPVIRLQTPHEFYDFEAKYQANDTQYHCPAGLSDEDEAKLRS
LAERAFSAIGASGWGRIDVMRSGNGDWFLLEANTVPGMTEKSLVPMAAKAAGLSFNDLVE
RILAQTLER
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgagacctttggtaaagtcgctgtcatgctgggtggtagctcggccgagcga
gatgtctcgctaaaatcgggaatggccgtattaaaaggcttagtggctaaaggtattgat
gcgcatgcatttgacccggcagcacatagcctgcaagaactggttgatgatggctacgaa
cgtgtatttatcgcgctgcatgggcgtggtggcgaagacggcgctatgcagggtgcacta
caagtactgggcattccctataccggtagtgatgttcttggctgtgctctgggtatggat
aaggtgcgttgcaaacaaatttggcacgctttggggttaccgacagccagctggcgggtc
attactcaagaagaaatagagcaagtgaacgccgaagcgctgctgttagagcttggcgga
cgcgtcatcgttaagccggcacgtgaaggctcatccattggtatgagcagtgccgatagc
gcaccgcgactggcggcagcgttaaaacatgccgcacagtttgatgacgacattctggtt
gagcagtggattgaaggccctgagtacaccatcggcttgctagacggaaatgctttacct
gttattcgtctgcagacaccgcatgagttttacgactttgaggcgaagtaccaggcgaat
gacacgcagtatcactgtcctgccgggttaagtgatgaagacgaagcgaaacttcgtagc
ttggctgagcgggcattttcagcgattggagcgagtggttgggggcgtatcgatgttatg
cgcagcggcaatggcgactggttcttactcgaagccaataccgttccgggcatgaccgaa
aagagcctggtacctatggctgcaaaagccgccggattaagttttaacgatttagtggag
cgcattttagcgcaaacactggagcgctga
DBGET
integrated database retrieval system