Idiomarina abyssalis: K5X84_07885
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Entry
K5X84_07885 CDS
T07548
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
iab
Idiomarina abyssalis
Pathway
iab03030
DNA replication
iab03430
Mismatch repair
iab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K5X84_07885 (dnaQ)
03430 Mismatch repair
K5X84_07885 (dnaQ)
03440 Homologous recombination
K5X84_07885 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iab03032
]
K5X84_07885 (dnaQ)
03400 DNA repair and recombination proteins [BR:
iab03400
]
K5X84_07885 (dnaQ)
Enzymes [BR:
iab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K5X84_07885 (dnaQ)
DNA replication proteins [BR:
iab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K5X84_07885 (dnaQ)
DNA repair and recombination proteins [BR:
iab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K5X84_07885 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QZN90098
LinkDB
All DBs
Position
complement(1652783..1653490)
Genome browser
AA seq
235 aa
AA seq
DB search
MRQVVLDTETTGIDPAKGHRIIEIGCVELINRKLTGNHFHVYINPERVVEQEAIEVHGIT
NDFLTDKPVFAQVVHDFIEFIKGSQLVIHNAPFDVGFMDAEFSRIRQNVGLTNDYCTVLD
TLQLAREMRPGQKNNLDALCRAFGVDNSSRELHGALLDAEILADVYLMMTGGQTDLNLAS
HGKNNQDGSQKVEHQRVTNPPALKVLRATADEEALHEARLARVKEEGGRCLWQDS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaggtcgtattagatacagaaactaccggtattgaccctgccaagggccatcga
attatcgaaattggctgtgtggagcttattaaccgcaaattaaccggtaatcatttccat
gtttatattaatcctgagcgggtggttgagcaggaggccattgaggttcatggaataacg
aacgactttctgacagacaagcctgtatttgctcaggttgtccacgatttcatcgagttc
attaaaggttcgcagttagtgattcacaacgcaccttttgatgtgggttttatggacgct
gagttcagccgtataagacagaatgtcggcttaacgaatgactactgtacggtactggat
actttgcagttagcgcgcgaaatgcggccagggcaaaaaaataatttggatgctttgtgc
cgtgcctttggtgttgataactcgtctcgtgaactgcacggcgcattgttggatgctgaa
attctggctgatgtttatttaatgatgacaggcggtcagacagatttgaacctggctagc
cacggaaaaaataatcaggatggttcgcaaaaagttgagcaccagcgagtgactaaccct
ccggcattaaaggttttacgcgcaacggccgatgaagaagcattacatgaggcgcgttta
gcgcgagttaaagaagaaggtgggcgctgtctgtggcaagactcttag
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