Idiomarina abyssalis: K5X84_09445
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Entry
K5X84_09445 CDS
T07548
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid kinase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
iab
Idiomarina abyssalis
Pathway
iab00540
Lipopolysaccharide biosynthesis
iab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
iab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
K5X84_09445
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
iab01005
]
K5X84_09445
Enzymes [BR:
iab01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
K5X84_09445
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
K5X84_09445
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
K5X84_09445
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
K5X84_09445
Lipopolysaccharide biosynthesis proteins [BR:
iab01005
]
Lipid A
K5X84_09445
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Kdo
RIO1
Pkinase
APH
TCAD9
YrbL-PhoP_reg
PK_Tyr_Ser-Thr
Glyco_trans_1_4
Motif
Other DBs
NCBI-ProteinID:
QZN90379
LinkDB
All DBs
Position
complement(1947720..1949705)
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AA seq
661 aa
AA seq
DB search
MRLWLYGMLLRLVTPAVFVWLWLRGKKDARYRQNWSERLALGAVDKKLQGCLVIHSVSVG
ETLAAKRLIEQLLHQQPGQKVLITCMTPTARTLIQQHFGESVSCRYWPIDTPGSAKRFVR
KLKPKAVWIMETELWPQMLNHFSKANVPVSLLNARLSERSAKGYRRFHWLMKAVWKQLTL
VSVQNKETARRMKVLGVAPSRLFVDGNLKYDIQLSGKDTDKAYPWKQSCSGRSVWLASSS
HPGEHEVLLKAHKLVQAEQPDACLIIAPRHPEQFEKVAELTRQSGLKLARRSELNEIPQD
CDVFLADSMGEMMLWGQLASMSFVGGSIIERGGHNPLEVIASGSNVMSGRHVFNFPQVYA
ELSKVGAVRWVKNAEEIKQAVSLIQQTAVMKAQHEAAKSVLQTHQGATLRVLKRALEYIL
TGSGMIKTEQTPRGLIRYDSDIIETIEDKHFSAQYWQQQKAIAGNSTGRATVWFIQQGDL
GLLLRHYYRGGLVGKINKDRFLREPAEKSRAIHEFDLLCKLRDIGLPVPRPVAARMEKTG
VFSYKADILVEVIPGAVDVYRLLREKQLSAELWQKLGSAIKQLHDTGVYHSDLNCHNLML
DDNDKAWIVDFDKCDFRESGEWKEANIQRLLRSLRKEKEKNETFYWKESRDWPELLTGYR
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagactgtggctctatggaatgctattgcggctggtcactccagccgtttttgtctgg
ttgtggctgcgtggcaagaaggatgcccgttaccgtcagaactggtcagaaaggcttgca
ttaggcgctgttgataaaaagctgcaggggtgcctagttatccacagtgtttctgttgga
gaaaccttagcggctaagcgactaatagagcagctgttgcatcaacagcccgggcaaaaa
gtgctgattacttgtatgacaccaaccgccaggacactcattcagcagcattttggcgag
tctgtcagctgtcgttattggccaattgatactccgggttcagcgaagcgcttcgtgcgt
aagctgaaacctaaagctgtatggataatggagacagagctttggccgcagatgctgaac
catttttccaaagctaatgtacctgtaagtttattgaatgcccggctttcggagcgctcc
gccaagggttatcggcgtttccattggcttatgaaggctgtatggaaacaactgactctg
gtgtcggttcagaataaagaaactgcgcgtcgaatgaaagttttgggggtagcgccgagt
cgactttttgtcgacggaaaccttaaatacgatatccaactttccggcaaggatactgat
aaagcttacccgtggaagcagagttgctctggaaggagcgtctggttggcgagtagcagt
catcccggggagcatgaagttcttcttaaagcacataagctggttcaggcagaacaacct
gatgcctgtcttattattgcgccaaggcaccctgagcaatttgaaaaagttgcggaactg
actcggcagtcgggactaaagttggctcgacgcagcgagcttaatgagataccacaggac
tgtgatgtctttctcgctgacagtatgggcgaaatgatgctgtgggggcagttagcttct
atgagctttgtcggcggaagtatcattgagcgtggagggcacaacccccttgaagttatt
gcttctggctccaatgttatgtctgggcggcatgtatttaatttcccacaggtttacgct
gagctgtctaaagtcggcgctgtgcgatgggtaaaaaatgccgaagaaattaaacaggct
gtgagtttgatacagcagacagcggtcatgaaagcgcaacatgaagctgctaaaagcgtt
ttacaaacgcatcagggtgctacgttaagagtcttaaagcgagcactggaatatattctg
acaggaagcggtatgataaaaacagagcagactccccgagggctcattcgctatgacagc
gatattatagaaacgatagaagataagcatttttcagcccaatattggcagcaacaaaag
gcgattgccgggaattcgacggggcgtgcaactgtctggtttatccaacaaggcgatctg
gggcttttgttacgacactattaccgtggtggtttggttggaaaaattaataaagaccgt
tttttacgcgagccagcggagaaaagccgggcaatacacgagtttgatttgctctgtaaa
ctccgtgatattggcttgccggttcctcgccctgtggcggcgagaatggaaaagaccggc
gtatttagttataaagctgatattttagttgaagtgattcccggcgcagttgatgtttat
cggctattgcgtgagaaacagctttcagcagagctttggcaaaaactcggaagtgctatt
aagcaattgcacgatactggtgtttatcactcggatttgaattgtcacaaccttatgctg
gatgacaacgacaaagcctggattgtggactttgataagtgtgatttccgtgagagcggg
gagtggaaggaagcgaatattcagcgtttgttgcgctccctgcgcaaagaaaaagaaaag
aacgagactttttactggaaggagtctcgtgactggcctgagttattaacgggttatcgc
cgttaa
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