Iamia sp. SCSIO 61187: HC251_20830
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Entry
HC251_20830 CDS
T07394
Name
(GenBank) diguanylate cyclase
Organism
iam
Iamia sp. SCSIO 61187
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
AAA_16
GAF
Pkinase
BrxC_BrxD
NACHT
PK_Tyr_Ser-Thr
nSTAND3
AAA_22
TIP49
AAA
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
QYG94639
LinkDB
All DBs
Position
complement(4343064..4347959)
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AA seq
1631 aa
AA seq
DB search
MTIGLLPGLEDLRPVQRRGDTLVLRARARDGAPVLVKTHASDLPTDASRERLRREHQATT
AVRHRHLVTARDLVDTSMRVALVLDDPPGPTWAEAVTAGAIDLVGVLDVAIAVGSALAAL
HARGVVHRAVDGEHVVLGPDGPVLVDLYDASESGVRPRRSSHGSHLAPEQRGPEPVPADA
AIDRYALGATTQALLAALGPIPDGLAVVLDRATHPDPRRRHRSVLGLVADLRAQRRHLVD
GGPSPAPSDDEVALRWEDPRQVVGRDDLRSRLVAAADAVAAAGQGRVVVVRGQPGSGRTA
LVRAVADDLRAKGVLCGTATMSDPGATVAFRAGATVMTQLVDQLLTAPEPVVRAVEGHLR
RSLGDDLAVATQVLPALGLVVGPQPEPPHIDPSEALGRVTRATRASIAAVARHLPPAVGI
FDDGDLGDATFMGALESVGGHPDAGPFLVVVVTDGSSGALRDLIARVAARGAVVEEVEVA
PLAPDDVAELIAQGTGMAAPAVAELADAVWRRSGGLPRVALADLWTLVESGDLWIDVDAG
VWRWSERARRVEAPLTLAEVAGARVRDLAPDALTGAAIVAVAGRAARVPVVARVLGIADQ
AAAAVVDRAVVAHVLAPASPRGELACLDDGVRDAVLAALDATERAELEQRVARAVLATAD
EGPDGHPDLADAHRIDVIDLLRRDPTLATDPDARQLLVGLCEDAARAAHRAGAFQEALDL
QRTAIEALGEQGWQTQPERAFELHLRAAEHALVVGRPELVDELLDAIGAHDPSAPQRVRT
MRVLGMRAWTRQDHDGGLEHLRLVLAELGEPLPARPTWRDVAVEAARTHAELGRFDPEWF
LTAPALEDERLLATLDAMLGCVHLAYVDQPLTHILLVLRGTRLTARHGVADASGYFIAAY
GMLCVSLPGATPRGLRFGRVAAELGSRGRATNATMVGFAVDAFVRHWGEPLDATVDPLLQ
RYRATVASGARGYGLTGGTFGVLHGLLAARPLQSVEATADAMAEELDAMGERAFRQRVDV
VAQAVADLRTGGDGDVLDGPAFSAPEWLAAKRRGGELAVIVHTLRALVALSHDRRDVAAE
AVAAAAPLLRSAPGEAVVGVHRFQAALIAADALAAASGASSRARRRAELARARARLRALA
EHAPANHAHRLALVDAVTADASGSARRAMDRYEEAVRLATEHGALGDLGLAAQRAARHHR
DRGRDRLARHYASVAQDAWLAWGADAVAAGLPARLPGLVSAPMPDAAAVRPGADPGRVPV
GQPSTVAAETLAEASTLLGEGLEVRDFLQRMVDLVMRQAGATRGYLVLHSPAGPVVEAAA
QVRNGVVEVVPRPSPDPAEHPGLSPHALHYVLRTRQVLALVDPADDRRLRADEALRERAP
RALLGLPIGGATGTPGAFVLESDDRPDGVEPTRVSALRVLAAQAISAVEHARLTSDLGAL
AQDVADLRSTADSMSTLAETDALTGVANRLGLESALRSVMDGTARPADAAPVAGEGPRVG
VLFCDLDGFKGVNDRLGHTAGDAALVEVARRLRAAVRSDDVVARLGGDEFVVVSIGVSDE
ELAQVAERIRVAVAQPIDVGAAAPVSLGVSIGVGRADMVGVTSLDDVDALLGAADDSMYR
AKRSGGNRVVS
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatcggcctcctcccgggtctggaggacctccgtcccgtccaacgacggggggac
accctggtgctgcgcgctcgcgcccgggacggggcccccgtcctggtgaagacgcacgcc
tcggacctcccgaccgacgcctcgcgcgagcggctgcgccgcgagcaccaggccacgacc
gcggtccgccaccgccacctggtgacggcccgggacctggtcgacacgtcgatgcgcgtc
gccctggtgctcgacgacccgcccgggccgacgtgggccgaggcggtgacggccggcgcc
atcgacctcgtcggcgtcctcgacgtcgccatcgccgtcggctccgccctggcggccctc
cacgcccggggtgtcgtccaccgggccgtcgacggcgagcacgtcgtcctcggccccgac
ggccccgtgctggtcgacctgtacgacgcgtccgagagcggggtccggccccggcgctcg
agccacgggagccacctcgcccccgagcagcgcggacccgagccggtcccggccgacgcg
gccatcgaccggtacgcgctgggcgcgacgacccaggccctcctggctgcgctcgggccc
atccccgacgggctggccgtcgtcctcgaccgggccacccaccccgacccgcggcgccgg
caccgatcggtcctcggcctggtcgccgacctccgggcccagcgccggcacctcgtggac
ggcggcccctccccggcgccgtccgacgacgaggtggccctccggtgggaggacccccgc
caggtcgtcgggcgcgacgaccttcgctcgcggctcgtggccgccgccgacgcggtggcc
gccgccggccagggccgcgtcgtcgtcgtccgcgggcagcccgggtcgggccgcaccgcg
ctcgtgcgggccgtcgccgacgacctgcgggccaagggggtgctctgcggcacggcgacg
atgtccgacccgggggcgacggtcgccttccgcgccggcgccacggtcatgacccagctg
gtcgaccagctcctgaccgctcccgagcccgtcgtgcgggccgtcgagggccacctccgc
cgctccctgggggacgacctcgccgtggccacccaggtgctgcccgccctgggcctggtg
gtcggaccgcagccggagccgccgcacatcgacccctccgaggcgctgggccgggtcacc
cgggccacgcgggcgtcgatcgcggcggtggcccgccacctgccacccgccgtcgggatc
ttcgacgacggcgacctgggcgacgccacgttcatgggcgccctcgagtccgtcggcggc
caccccgacgccggccccttcctcgtcgtggtcgtcaccgacggctcgtcgggcgccctc
cgggacctgatcgcccgggtcgccgcccggggcgcggtggtcgaggaggtcgaggtcgcg
ccgctcgcccccgacgacgtcgccgagctcatcgcccaggggacggggatggccgcccca
gcggtcgccgagctggccgacgccgtgtggcgccgctccggcggcctgccccgcgtggcc
ctggccgacctgtggacgctggtcgagtcgggcgacctgtggatcgacgtcgatgccggc
gtctggcgctggtccgaacgggcccgtcgggtcgaggccccgctcacgctggccgaggtc
gccggcgcgcgggtccgggacctggcaccggacgccctcaccggagccgccatcgtcgcc
gtcgccgggcgcgccgcccgggtcccggtggtcgcccgcgtcctcgggatcgcggaccag
gccgccgccgcggtcgtcgatcgggccgtcgtggcccacgtgctggcgccggcctcgccc
cgcggggagctggcgtgcctcgacgacggtgtgcgcgacgcggtcctggccgccctcgac
gccaccgagcgggccgagctcgagcagcgggtcgcccgggccgtgctggcgaccgccgac
gaggggcccgacgggcaccccgacctggccgacgcccaccgcatcgacgtcatcgacctc
ctgcggcgcgacccgaccctggccaccgaccccgacgcccgccagctgctcgtcgggttg
tgcgaggacgccgctcgcgccgcccaccgcgccggagcgttccaggaggcgctcgacctc
cagcgcaccgccatcgaggcactcggcgagcagggctggcagacgcagcccgagcgggcc
ttcgagctccacctccgcgccgccgagcacgccctcgtcgtcggccggcccgagctggtc
gacgagctcctggacgccatcggcgcccacgacccgtccgccccgcagcgggtgcggacg
atgcgggtcctgggcatgcgggcgtggacccgacaggaccacgacggcggcctcgagcac
ctgcgcctcgtgctggccgagctgggcgagccgctcccggcccgcccgacctggcgcgac
gtcgccgtcgaggcggcgcgcacccatgccgagctgggccggttcgaccccgagtggttc
ctcaccgccccggcgctggaggacgagcgcctcctcgccaccctcgacgccatgctcggc
tgcgtccacctggcctacgtcgaccagcccctcacccacatcctcctggtgctccggggg
acgcgcctcaccgcccggcacggggtcgccgacgcctcgggctacttcatcgccgcctac
gggatgctctgcgtctcgctgccgggcgccaccccgcggggcctgcgcttcggccgggtc
gcggccgagctggggagccggggccgggccaccaacgcgaccatggtcggcttcgccgtg
gacgccttcgtccgccactggggcgagcccctcgacgccaccgtcgacccgctgctccag
cgctaccgcgccaccgtcgcctccggggcccggggctacgggctgaccgggggcaccttc
ggggtgctgcacggccttctcgccgcccggcccctccagtcggtcgaggccaccgccgac
gccatggccgaggagctcgacgccatgggggagagggcgttccgccagagggtcgacgtc
gtcgcccaggcggtcgccgacctgcggaccggcggcgacggcgacgtgctcgacggcccg
gccttctcggcaccggagtggctcgcggccaagcggcgcggcggcgagctggccgtgatc
gtccacacgctccgcgccctcgtcgccctcagccacgaccgtcgcgacgtcgccgccgag
gcggtcgccgccgccgccccgctcctgcgctcggcgccgggcgaggccgtcgtcggggtg
caccgcttccaggccgccctgatcgccgccgacgccctcgccgccgcctccggtgcatcg
tcccgggcccgccgccgggccgagctggcccgggcccgggcccgcctgagggcgctggcc
gagcacgcccccgcgaaccacgcccaccgtctcgccctcgtcgacgcggtcaccgccgac
gccagcgggtcggcccgacgggcgatggaccgctacgaggaggccgtccggctggccacc
gagcacggtgccctcggcgacctcgggctggcggcccagcgggccgcccgccaccaccgg
gaccggggccgcgaccgcctggcccgccactacgcctcggtcgcccaggacgcctggctg
gcctggggcgccgatgccgtggccgccgggctgccggcccggctgcccggcctggtcagc
gccccgatgcccgacgccgccgccgtccgccccggcgccgaccccggtcgcgtgcccgtc
ggccagcccagcacggtggcggccgagaccctggccgaggccagcaccctcctcggcgag
ggcctcgaggtgcgcgacttcctccagcggatggtcgacctggtgatgcgccaggccggc
gccacccggggctacctcgtcctccactcgccggccggccccgtcgtcgaggctgccgcc
caggtgcgcaacggcgtcgtcgaggtcgtgccccgcccgtcccccgaccccgccgagcac
ccgggcctcagcccccacgccctgcactacgtgctgcgcacccgccaggtgctggccctc
gtcgacccggccgacgaccgccgcctgcgggccgacgaggccctccgcgagcgggcgcca
cgggccctcctcggcctgcccatcggcggcgccaccggcacccccggcgccttcgtcctg
gagagcgacgaccggcccgacggggtggagccgacccgcgtcagcgccctgcgggtcctc
gccgcccaggccatctcggcggtcgagcacgcccgcctcacctcggacctcggcgccctc
gcccaggacgtggccgacctccgatcgaccgccgacagcatgtcgaccctcgccgagacc
gacgcgctcacgggggtggccaaccggctcggcctcgagtccgccctccgctccgtcatg
gacggcaccgcccgaccggccgacgccgcacccgtggccggtgagggacctcgcgtcggg
gtgttgttctgcgacctcgacgggttcaagggggtcaacgaccgcctgggccacaccgcc
ggcgatgccgccctcgtcgaggtggcccgccggctgcgggccgccgtccggtccgacgac
gtcgtggcccgcctcggcggcgacgagttcgtggtcgtctcgatcggcgtgtccgacgag
gagctggcccaggtcgccgagcgcatccgggtcgccgtcgcccagcccatcgacgtcggc
gccgctgcacccgtgtcgctcggcgtctccatcggcgtgggccgggccgacatggtcggc
gtcacctcgctcgacgacgtcgacgccctcctcggcgccgccgacgactccatgtaccgg
gccaagcgctcgggggggaaccgggtggtctcgtag
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