Intestinibacter bartlettii: NQ514_02135
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Entry
NQ514_02135 CDS
T08452
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ibr
Intestinibacter bartlettii
Pathway
ibr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ibr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NQ514_02135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ibr03400
]
NQ514_02135
Enzymes [BR:
ibr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NQ514_02135
DNA repair and recombination proteins [BR:
ibr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NQ514_02135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
T2SSE
PIF1
Helicase_RecD
UvrD-helicase
DEAD
AAA_22
nSTAND3
Ribosomal_S13
HHH
SLFN-g3_helicase
TrwB_AAD_bind
UvrD_C
ATPase_2
SRP54
HHH_2
AAA_16
PhoH
AAA_28
Thymidylate_kin
Herpes_Helicase
Zeta_toxin
KTI12
AAA_5
AAA_14
NTPase_1
RsgA_GTPase
HHH_3
ResIII
cobW
MeaB
AAA_24
AAA
ABC_tran
AAA_29
5_3_exonuc
TK
AAA_7
FtsK_SpoIIIE
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
UWO81307
LinkDB
All DBs
Position
376999..379227
Genome browser
AA seq
742 aa
AA seq
DB search
MEKLEGMISDIVFKNEENGYTIAYLANEDEEVTIVGCMPTLSVGESIEVEGRWVTHKTYG
SQFEVNKFMPVTPSSLEGIYAYLSSGMIHGIGEKMATRIIEKFGVDTLDVIQNTPERLKE
VEGIGSKKIKQITESYEENRELRNIIMQLSPYGITPNYCLKIYKKYKENAISIINKNPYR
LAEDIRGIGFRIADDIAKKLGIDKYSRDRIFQGILYTLNQSASNGNTYLPLSVLVPQAMK
VLEIEAEKIKEGVLELAYTQKIHVEKDQNDINVYLMPYYLSENGVCKEMIRLAQYDFENL
NIDVDHEIKLIEREEGIKLAQNQVMAVKEAIEKGVVIITGGPGTGKTTTINTIIKVFENN
DQKVVLAAPTGRAAKRMSETSNKEAKTIHRLLEMGFGMDSDELTFMKNEEDPIDADVVIL
DEVSMVDIVLMYSLLRAIKSGTRLLIVGDSDQLPSVGAGNVLKDLIDSEVINTVRLNEIF
RQAQESMIVVNAHKINKGEPLKLNVKGKDFFFIKKEGDDILQEIVGVVSERLPKFYGVDK
LKDIQVLSPMRKGTLGVNNLNIELQKSLNPPSKYKTEEVFSKRTFRVGDKVMQIKNNYTR
KWQSEDGSNSGHGIYNGDIGYIYYIDKEKKEIFVIFDSLKIVTYKYDELDELDHSFCTTI
HKSQGSEFPIVVIPMAWAPPMLLSRNLLYTAVTRAKKQVVLVGEVKYLEFMIKNNRSNDR
YSNLAVKLNKFKKEGLLIEDNE
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattagaaggtatgataagtgatatagtttttaaaaatgaagagaatggatac
actatagcttatcttgcaaacgaagacgaagaagttacaattgtcggatgtatgccgact
ttgtctgttggtgagagtatagaagttgaaggaagatgggtcacacataaaacgtatggc
tcacaatttgaagtaaataaatttatgcctgttacaccttcatctttggagggaatttac
gcttatttatcttctggtatgattcatggtataggagagaaaatggcaactaggattatt
gaaaagtttggagtcgatactctagacgtaatccaaaacactccagagcgattaaaagaa
gttgagggaattgggtcaaagaaaataaaacagataacagagagttatgaagaaaataga
gaattgagaaatataattatgcaactttctccttatggaataactcctaattactgttta
aaaatttataaaaaatataaagagaatgcaattagcattataaataagaatccatacagg
cttgctgaagatatcaggggaattgggtttagaattgcggacgatatcgcaaagaagctt
ggtatagataaatattctagggatagaatattccaaggaattttatatacgcttaaccaa
agcgcatcaaatggaaatacatatttaccgctgagtgttcttgtcccacaagcgatgaag
gtattagaaattgaggcagaaaagataaaagaaggtgttcttgaattagcatatactcaa
aaaatacatgttgaaaaagaccaaaacgatataaatgtatatcttatgccatattatctt
tctgaaaatggagtctgcaaagaaatgataagacttgctcaatatgactttgagaattta
aacatagatgttgaccatgaaataaaacttattgaaagagaagaaggaattaaactggca
caaaatcaggttatggcagttaaagaagctattgaaaaaggtgttgtaataatcactggt
ggaccaggtacagggaaaacaacaacaattaatacaattatcaaagtatttgaaaataac
gaccaaaaagtcgttttggcggcgccaacaggacgtgcagcaaagagaatgagtgaaact
tcaaataaagaggcaaagacaattcacaggcttttagaaatgggattcggaatggacagc
gatgaacttacatttatgaaaaatgaagaagatccaattgatgctgatgttgttattctt
gacgaggtttcaatggttgatattgtgcttatgtatagcttgcttagagctataaaatct
gggacaagacttttaatcgttggggatagcgaccagttgccttcagttggagcaggaaat
gtattaaaagatcttatcgattcagaagttataaatactgttagattaaatgaaatattc
agacaagctcaagaaagtatgatagtagtcaatgcccataaaattaataaaggtgaacca
ttaaaactgaatgtaaaagggaaggatttcttctttattaaaaaagaaggagacgatata
ctgcaagaaatcgtaggggttgttagtgagagattaccgaaattctacggtgtagataaa
ttaaaagatattcaagttttatcgccaatgcgaaaaggaactcttggtgtaaataattta
aatatagagctgcaaaaaagtcttaatccgccatcaaaatataaaactgaagaagtattt
tcaaaaagaacattcagagttggcgacaaggttatgcagattaaaaataattatacgaga
aaatggcaaagtgaagatggaagtaatagtggacatggtatatataatggcgatattggt
tatatttactatatagacaaagaaaagaaagagatatttgtaatattcgatagtttaaaa
atcgtaacttacaagtacgacgagttagatgaattagaccacagtttctgtacgactatt
cataaaagccaagggagtgaattcccaatcgttgtaataccgatggcgtgggcgccacca
atgctacttagccgaaatctactttatacagctgttacacgtgcaaagaaacaggttgtg
ctagttggtgaagttaagtacctagaatttatgataaaaaacaatcgaagcaacgacaga
tactctaatttagcagttaagttaaataaatttaaaaaagagggtctgctgattgaagat
aacgaataa
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