Intrasporangium calvum: Intca_0420
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Entry
Intca_0420 CDS
T01385
Name
(GenBank) coagulation factor 5/8 type domain protein
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
ica
Intrasporangium calvum
Pathway
ica00511
Other glycan degradation
ica00600
Sphingolipid metabolism
ica01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
Intca_0420
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Intca_0420
Enzymes [BR:
ica01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
Intca_0420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BNR_2
F5_F8_type_C
BNR_3
NPCBM_assoc
BNR
CHB_HEX_C
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-ProteinID:
ADU46968
UniProt:
E6S864
LinkDB
All DBs
Position
453823..456300
Genome browser
AA seq
825 aa
AA seq
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MHTRRAALAGLALTVSIPLTVPLSVPVAMAGAAAATAADQTGITRTDLDHTGDGYPVYRI
PALTKTTDGTLVAAYDGRPSYGDVPNNIALVVRRSTDDGSTWEDRQVVRYEAGKPGFGDP
SLVTDRVTGRIWLFHAASVNQGYFGSTTGTDDADPNVLHADVSWSDDDGLTWQHRRLTSE
VKDPQWGGLFAASGEGIQIRRGPHQGRLVQQYAIRYQGGNWAASLISDDHGETWRFGDLL
GPGMDENKVVELSDGRLMLNSRAPGGYRKVAYSSDGGETWSGLHADDELVDPQNNGSIIR
YDADAAPSSPDAAKLLFSNTATQSGRRNLTIRQSCDNGETWPIRKVVEPGAAEYSTLTPL
GDQQFGLLYERGGYQHISFARFGGDWLDGVCAPLTSRTVTAGSPGGTAEVEVKVTSQETG
AIDGGRVALDLPSGFTAPEVPVAKLSRGATATVRIPVRMPEGAVTNAYPYTARFLSDKGS
SQSGGSIVVKGGNVVLSDSTERSYDGATITDLTDRVDAVKDLTGGAVTVRFSTTARPAVG
TLLSLADPISAVRDVIVSLNGGRPYVEVRTATSTYPIRLQSSVDVADGKVHELIAASNAG
VTSLILDDAVIAQVDGQGFFADVTALTRPHTLNPSGKPNLTLGMNRGHFSVNGGPAAPNS
RWGFVGTIHSVEVSDDLRTGEELVPAAGLSIASVSSEETAGEDGRAANAVDGNPATIWHS
KWTGTAAEYPHQITVDLGQAQPLTALRYLRRAVGTNGDIADHVVSVSDDNVSWTQVATGT
FAATKGEEEVRFAPQTARYVRLEALSAVNGLQFAAAAELRPVRTS
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgcacacccgacgcgcggccctcgcgggcctcgccctcaccgtgtccatccccctgacc
gtccccttgagcgtccccgtggcgatggccggggcagccgccgccaccgccgcggaccaa
actggcatcacccgcaccgacctcgaccacaccggcgacggctaccccgtctaccgcatt
cccgcgctgacgaagacgaccgacgggacgctcgtggcggcttatgacggccgccccagc
tatggagacgtcccgaacaacatcgcgctcgtcgttcgtcgcagcaccgacgacggctcg
acgtgggaggaccggcaggtggttcgctacgaggccggcaagccgggcttcggtgacccc
agcctcgtcaccgaccgggtgacgggccggatctggctgttccacgccgcctccgtcaac
cagggctacttcgggtccacgaccggcaccgacgacgccgaccccaatgtgctccacgcc
gacgtcagctggtccgacgacgacggcctgacgtggcagcaccggcggctcacgagcgag
gtcaaggacccgcagtggggcggcctcttcgccgcctccggcgagggcatccagatccgg
cgcggcccgcaccaggggcgactcgtccagcagtacgccatccggtaccagggcggcaac
tgggcggccagcctcatcagtgacgaccacggcgagacgtggcgcttcggggacctgctc
ggccccggcatggacgagaacaaggtggtcgagctctcggacgggcggctcatgctcaac
tctcgggcgcccggcggataccgcaaggtcgcctactcgagcgacggcggcgagacgtgg
tcggggctgcacgccgacgacgagctggtcgacccgcagaacaacgggtcgatcatccgc
tacgacgcggacgcggccccgagctcaccggacgccgccaagctcctcttcagcaacacg
gcgacgcagagcggccgccgcaacctgacgatccgacagtcgtgcgacaacggggagacc
tggccgatccgcaaggtcgtcgagccgggcgccgccgagtactccaccctcacgcccttg
ggagaccagcagttcggcctgctctacgagcggggtggctaccagcacatcagcttcgcg
cggttcggtggcgactggctcgacggcgtctgcgcgccgctcacgagccgcacggtcacg
gcgggctccccgggcggaaccgccgaggtcgaggtgaaggtgacgagccaggagaccggt
gccatcgacggaggcagggtggccctcgacctgccgtcgggcttcaccgcgcccgaggtc
ccggtcgcgaagctgagccgcggggccacggcgacggtgcggatcccggtccggatgccc
gagggagcggtgaccaacgcctacccgtacaccgcccggttcctcagcgacaagggttcc
tcccagagcggcgggagcatcgtggtcaagggcggcaacgtcgtcctcagcgactcgacc
gagcgcagctacgacggagcgacgatcacggacctcaccgaccgggtcgacgcggtgaag
gacctcaccggcggcgccgtgaccgtgcgcttcagcacgacggcccgccccgccgtgggc
acgctcctgtccctggccgaccccatcagcgccgtccgtgacgtcatcgtctcgctcaac
ggtgggcggccctacgtcgaggtgcgcaccgcgacgagcacctacccgatccggctgcag
agcagtgtcgacgtcgccgacggcaaggttcacgagctcatcgcggcgagcaacgccggg
gtcacctcgctgatcctcgacgatgccgtcatcgcccaggtcgacggtcaggggttcttc
gccgacgtcacggccctgacccgcccgcacaccctcaacccgagcggcaagccgaacctc
accctcggcatgaaccgcggtcacttctccgtcaacggcggccccgctgcgccgaacagc
cgctggggcttcgtcggcacgatccacagcgtcgaggtctccgacgacctgcggaccggc
gaggagctggtcccggccgccggactctcgatcgcctcggtctccagcgaggagaccgcc
ggtgaggacggtcgcgccgccaacgccgtcgacggcaacccagcgacgatctggcactcg
aagtggaccggcaccgcggccgagtacccgcaccagatcaccgtggacctcggccaggcg
cagcccctcaccgcgctgcgctacctgcggcgcgccgtcgggacgaacggcgacatcgcc
gaccacgtcgtctcggtgagcgacgacaacgtctcgtggacccaggttgcgacgggcacg
ttcgccgcgacgaagggtgaggaggaggtccgcttcgcaccccaaacggcgcgctacgtg
cggctcgaggcgctcagtgccgtcaacggactgcagttcgccgcggccgccgagctccgc
cccgtccgcaccagctga
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