Ideonella dechloratans: LRM40_04730
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Entry
LRM40_04730 CDS
T07737
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
idc
Ideonella dechloratans
Pathway
idc00470
D-Amino acid metabolism
idc00550
Peptidoglycan biosynthesis
idc01100
Metabolic pathways
idc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LRM40_04730
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LRM40_04730
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LRM40_04730
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
idc01011
]
LRM40_04730
Enzymes [BR:
idc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
LRM40_04730
Peptidoglycan biosynthesis and degradation proteins [BR:
idc01011
]
Precursor biosynthesis
Amino acid ligase
LRM40_04730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
CPSase_L_D2
ATPgrasp_ST
GARS_A
ATP-grasp
RimK
TTL
Neuropep_like
Motif
Other DBs
NCBI-ProteinID:
UFU10987
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All DBs
Position
1009737..1010714
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AA seq
325 aa
AA seq
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MSTVDVKALGKVAVLMGGSSAERPVSLMSGEGVLKALRSRGVDAHAFDPAERDLGDLKRE
GFDRCFIALHGRHGEDGTVQGALELLGIPYTGSGVMASAVAMDKVMTKRVWLAEGLPTPR
WRRLSTEERTHEMVREVPDALGLPLIVKPAKEGSSFGVTKVRGYSGMQEAVTLAAQYDSD
VLCEEFIDGDEVTCPVLGEGEASAALPVIRIQAPDGNYDFEHKYYSEETRYLVPSGLPEA
EEREIQRLVVAAYRALGCRGWGRADLMIRASDRKPFLLEMNTSPGMTGHSLVPQSAKAAG
ISYEDLCLRLLAGATLDSRTPAAQP
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggtggacgtgaaggcgctgggcaaggtggcggtgttgatgggcggcagctcg
gccgagcggccggtctcgctgatgtcgggcgagggcgtgctcaaggccctgcgctcgcgc
ggcgtggacgcccatgccttcgatccggccgaacgcgacctgggcgatctcaagcgcgag
ggcttcgaccgctgcttcatcgccctgcacggtcgccatggcgaggacggcacggtgcag
ggcgcgctcgaactgttgggcattccctacaccggctcgggcgtgatggcctcggccgtg
gcgatggacaaggtcatgaccaagcgggtctggctggccgaaggcctgcccacgccgcgc
tggcgccgcctgtccaccgaggagcgcacgcatgaaatggtgcgagaggtgcccgatgcc
ctgggcctgccgctgatcgtcaagccggccaaggagggttcttccttcggtgtgacgaag
gtgcgggggtattccggcatgcaggaagcggtcactctcgcggcacaatacgactccgac
gtgctttgcgaagaattcatcgacggtgacgaggtgacctgccccgtgctgggtgagggc
gaagcctccgccgcgttgccggtgatccgcatccaggcccccgacggcaactacgatttc
gagcacaagtactactccgaggagacgcgctacctggtcccgtccggcctgcccgaggcg
gaggagcgcgagatccagcgcctggtggtggccgcctaccgcgccctgggttgccgaggc
tggggccgcgccgatctgatgatccgcgccagcgaccgcaagcccttcctgctggagatg
aacacctcgccgggcatgaccggccactcgctcgtgccgcaatcggccaaggccgccggc
atcagctacgaagacctctgcctgcgtctgctcgccggcgccaccctggacagccggacc
cccgccgcccagccatga
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