Ideonella dechloratans: LRM40_15125
Help
Entry
LRM40_15125 CDS
T07737
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
idc
Ideonella dechloratans
Pathway
idc00550
Peptidoglycan biosynthesis
idc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LRM40_15125 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
idc01002
]
LRM40_15125 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
idc01011
]
LRM40_15125 (dacB)
Enzymes [BR:
idc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LRM40_15125 (dacB)
Peptidases and inhibitors [BR:
idc01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
LRM40_15125 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
idc01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
LRM40_15125 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
UFU09621
LinkDB
All DBs
Position
3262969..3264372
Genome browser
AA seq
467 aa
AA seq
DB search
MLCLTLLAPLAQAAPALPPAVQTALRRAQVPAEALSVVVQEVGSERPLWSLAPDTPRNPA
SVFKLLTTYAALDQLGPAWTWQTPVYLSGPVRDGVLDGSVLLRGSGDPSLVLERVWLLLR
HLQQRGVHRIRGDIVLDRSAWQLPPSTPADFDGEPSKPYNVQPDVLLLNFKTLTLHFSPQ
PDLGVARVSAEPLLAGVSLPETVPLSPRPCGDWRTALQPDWSDPTRIRLQGSLGADCGEK
DWPVAYADPAHYNARLIAQLWQEMGGQLDGQVREGTVPAQADPTWQESSPPLAEVVRDIN
KFSNNLMAEQLFLTLGMLEYADPDRPATPDDARAALHDWLVRHLGPEAAAQVVVDKGSGL
SRETRITASQLATLLLQAWRSPVMPELMSSLPVSGVDGTLKRSTATGGRAHLKTGSLRDV
AAQAGYVLSRSGRRYVLVALVNDAQAGRARPALEALTQWVMDDAPAP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtgctctgtctgaccctgctggcgcccctggcccaggccgcgcccgccctgcccccggcg
gtgcagaccgccctgcggcgggcccaggtgcctgccgaagccctgtcggtggtggtgcag
gaggtgggcagcgagcgcccgctctggagcctggcgcccgacaccccgcgcaacccggcc
tcggtcttcaagctgctcaccacctacgcggcattggaccagctgggcccggcctggacc
tggcagacgccggtctacctgagcggaccggtgcgcgacggggtcctcgacggctcggtg
ctgctgcgcggcagcggcgaccccagcctggtgctggagcgggtgtggctgctgctgcgc
catctgcagcagcggggcgtgcaccgcatccgcggcgacatcgtgctggaccgcagcgcc
tggcagctgccgcccagcacgccggcggacttcgacggcgagcccagcaagccctacaac
gtgcagcccgatgtgctgctgctgaatttcaagaccctgaccctgcacttcagcccgcag
ccggacctcggcgtggcccgggtcagcgcggaaccgctgctggccggggtgagcctgccc
gagacggtgccgctgagcccgcggccctgcggcgactggcgcaccgccctgcaacccgac
tggagcgaccccacgcgcatccgcctgcagggcagcctgggggctgattgcggcgagaag
gactggccggtggcctatgccgacccggcgcactacaacgcgcggctgatcgcccagctc
tggcaggagatgggcggccagctcgacggtcaggtgagggaaggcacggtgccggcgcag
gccgacccgacctggcaggaaagctcccccccgctggccgaggtggtgcgcgacatcaac
aaattcagcaacaacctgatggccgagcagctcttcctgacgctgggcatgctggaatac
gccgaccccgaccgccccgccacgcccgacgatgcgcgcgccgcgctgcacgactggctg
gtgcgccacctggggccggaggctgcggcgcaggtggtggtggacaagggctccggcctg
tcacgcgagacccgcatcacggcctcgcaactggccacgctgctgctgcaggcctggcgc
agcccggtgatgccggagctgatgagttcgctgccggtcagcggcgtggacggcacgctc
aagcgctcgaccgccaccggcggccgggcccatttgaagacgggttcgctgcgcgacgtg
gccgcccaggccggctatgtgctctcgcgcagcggccgccgctacgtgctggtggccctg
gtcaacgacgcgcaggccggacgcgcccggcccgcgctggaagccctgacccagtgggtc
atggacgacgcgccggcaccctga
DBGET
integrated database retrieval system