Ideonella dechloratans: LRM40_16765
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Entry
LRM40_16765 CDS
T07737
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
idc
Ideonella dechloratans
Pathway
idc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LRM40_16765 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
idc03400
]
LRM40_16765 (xth)
Enzymes [BR:
idc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LRM40_16765 (xth)
DNA repair and recombination proteins [BR:
idc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LRM40_16765 (xth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UFU09925
LinkDB
All DBs
Position
complement(3599933..3600616)
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AA seq
227 aa
AA seq
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MGFRLVTLNLNGIRSAASKGFMPWTESIAPDCMGVQEVKAQAPDVQGKYDRVAGMAGHFH
YAEKKGYSGVGVYSRHEPSDVVIGLGEPEFDAEGRYVELRFDKPGRQLSIISCYFPSGSS
GEERQQAKFRFLDVVYPHLHALKGQREFILVGDVNIAHKEIDLKNWKGNQKNSGFLPEER
AWMTRLLDEVGVVDVYRRLHPETTGEAYTWWSNRGQAYAKNVGWRLD
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgggattcagactggtcacactcaacctgaacggcatccgatcggcggccagcaagggc
ttcatgccctggacggagagtatcgcgcccgattgtatgggggtgcaggaagtcaaggcc
caggcgcccgacgtgcaggggaaatacgacagggtcgccggcatggcggggcacttccac
tatgccgagaagaagggctactccggtgtcggggtgtacagccgccacgagcccagcgac
gtggtcatcggcctgggcgagccggagttcgatgccgaaggccgctatgtcgagttgcgc
ttcgacaagcccggacgccaactcagcatcatcagctgctacttccccagcggctcttcg
ggcgaggagcgccagcaggccaagttccgcttcctggacgtggtctacccgcacctgcac
gcgctcaagggccagcgcgagttcatcctggtcggcgacgtgaacatcgcccacaaggaa
atcgacctgaagaactggaagggcaaccagaagaacagcggtttcctgcccgaggaacgg
gcctggatgacccggctgctggacgaggtcggggtggtggacgtctaccgtcgcctgcac
cccgagaccaccggcgaggcctacacctggtggagcaaccgcggccaggcctacgcgaag
aacgtgggctggcgcctggactag
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integrated database retrieval system