Iodobacter fluviatilis: C1H71_10490
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Entry
C1H71_10490 CDS
T06803
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
ifl
Iodobacter fluviatilis
Pathway
ifl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ifl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C1H71_10490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ifl02022
]
C1H71_10490
02035 Bacterial motility proteins [BR:
ifl02035
]
C1H71_10490
Two-component system [BR:
ifl02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
C1H71_10490
Bacterial motility proteins [BR:
ifl02035
]
Pilus system
Twitching motility proteins
C1H71_10490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
HTH_28
AAA_16
Xre-like-HTH
AAA_22
HTH_30
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
QBC43932
UniProt:
A0A7G3GA33
LinkDB
All DBs
Position
2305393..2306739
Genome browser
AA seq
448 aa
AA seq
DB search
MARKSSKNSKRVLVVDDERDLAELLELTLLKMGLDVDCAYGVKEACSKLDQGIYELCLTD
MRMPDGEGLEIIRHIQNKGLDVPVAVITAYGSTDNAVAALKAGAFDYLAKPVALDQLRAL
VKSALALDDAPIHLQQDRPLLGESTAIQHALELIAKLAKSQAPVYVTGESGSGKERAARL
IHASSSRANHPFVAVNCGAIPENLMESEFFGHKKGAFTGANEDRDGFFHAANSGTLFLDE
VADLPLAMQVKLLRVIQERTVRKLGATAEDALDVRIISATHQSLSQCVEAGRFRQDLYYR
LNVIELRMPALREMGSDVLVIARHVLARLAKLNGQSLPDFSSDALTALQRYDFPGNVREL
ENVLERALALADGHAITAADLQLSPSDEAVAESDLGDKYPLQDYMDRVEKQAILEALEKT
RFNRTQAAKILGLTFRSLRYRLDRLGIQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggaagtcgagtaaaaatagtaagcgcgtgttggttgtggatgatgaacgtgat
ctggctgagttgcttgaattaaccctgctcaaaatgggtttagatgttgattgtgcctac
ggggtaaaagaggcgtgcagcaagctagatcagggcatttatgagctatgcctaactgat
atgcgtatgcccgatggcgagggtttagagattattcggcatatccaaaataaaggcttg
gatgtgcccgtggcggtgattaccgcctatggcagcaccgataacgccgtggcggcgtta
aaagcaggcgcgtttgattatctggccaagcccgtggcgctggatcagctgcgggctttg
gttaaatctgcgctagcgctagacgatgcgcctattcatcttcaacaagaccggcccttg
ctgggcgaatctaccgcgattcaacacgctttagagctcatcgcaaaattggcgaaaagc
caagcgccggtgtatgtcacgggtgaatctggctctggaaaagagcgtgccgctcgtttg
attcacgccagctctagccgtgctaatcatccctttgtggcagtgaactgcggagccatc
ccagaaaacctgatggaaagcgagttttttgggcataaaaaaggcgcatttactggcgca
aacgaagaccgagatggcttttttcatgccgccaatagcggcaccttgtttttggatgaa
gtagcggatctgccgttggcgatgcaagtcaagctattgcgggttattcaagagcgcaca
gtgcgcaaattaggtgcaaccgcagaagacgccttagatgtgcggattatctctgccacg
caccaaagcctaagccaatgcgtggaggcggggcgttttaggcaggatttatactaccgg
ctgaatgtgattgagctgcgcatgcccgctttaagggaaatgggcagcgatgtgctagtg
attgctcgccatgtgttggctaggctggcgaagcttaatggccaaagtttgcctgatttt
tccagtgatgcgctaaccgcactgcagcgctatgatttcccaggcaatgtacgtgagctg
gaaaacgtcttggagcgtgcgcttgccttggcagatggccatgcaattactgccgcagat
ttgcagctaagccccagcgatgaggccgtggcggagagcgatttaggcgataaatacccg
ctgcaagattatatggatagggtagagaagcaggctattttggaggccttagaaaaaacg
cgctttaatcggactcaggcggctaagattctagggctgactttccgcagcctgcgctat
cggcttgatcgtttaggaattcaataa
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