KEGG   Ictalurus furcatus (blue catfish): 128600521
Entry
128600521         CDS       T09387                                 
Symbol
sdc3
Name
(RefSeq) syndecan-3
  KO
K16337  syndecan 3
Organism
ifu  Ictalurus furcatus (blue catfish)
Pathway
ifu04514  Cell adhesion molecules
ifu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    128600521 (sdc3)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128600521 (sdc3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:ifu00535]
    128600521 (sdc3)
Proteoglycans [BR:ifu00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   128600521 (sdc3)
SSDB
Motif
Pfam: Syndecan Plasmodium_Vir FapA
Other DBs
NCBI-GeneID: 128600521
NCBI-ProteinID: XP_053469047
LinkDB
Position
24:complement(13700655..13735195)
AA seq 444 aa
MKLPGWMAVALLLAHSVSTQRRSSQLEDLESSGNDLYDDEDYFSGSGSGDSVMETGSMSF
TTTEPLPLSTTQATGPAPSASPAAEPSNPLVIETERESGMDIERELEPEIEKKRAQQNEH
EQEMERVREREREREKEREREREIEREREREREREREREREREREREREREKERERARST
IAPRVPFVPMKTTDCVRIVNETFIPSEDMYVLGTAEEEEDGMFSTTETYPFESLTEDPVT
DDITTTEAAPTTIASTTAISITTPATPSTAPPRSRKPQLMPSITPPRSRKPQATPSRATP
TESTRPVPASTVQVKTPDAEINNEVAVVGPSGDSGIREEEVQQGNEVGRGKGASDVGAEP
DLTGNTIDTGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGS
YTLEEPKQATVTYQKPDKQEEFYA
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgaagctgccgggctggatggctgtggcgctgctgctcgcgcactctgtgtcgacacag
cgtcgctcatcacagctagaggatctggagagctctggaaatgacctgtatgatgatgaa
gactatttctctggttcaggctcaggtgactcagtgatggagacaggctccatgtctttc
accacaacagagcccctcccactttcaaccacacaggccactggacccgccccttctgcc
tcacccgctgcagagcccagcaaccccctggtgatagaaacagagagggagagtggtatg
gatattgagagggaactggagccagagattgagaaaaagagagcgcagcagaatgagcac
gagcaggaaatggagagagtgcgggaaagagagagagagcgagagaaggagagagagcga
gagagggagatagagcgagagagggagagagagagggagagagagagagagagggagaga
gaacgtgaacgcgaaagagaacgtgaacgtgaaaaagagagagagagggcaagaagtaca
attgcacccagagtcccctttgttccaatgaaaaccacagactgtgttaggattgtgaac
gagaccttcattcccagtgaggatatgtatgtccttggcactgcagaagaagaagaagat
ggtatgttcagtaccacggaaacctaccccttcgaatcactcacggaggaccctgtcaca
gatgacatcacaaccactgaagcggctcccaccactattgcttccactacagctatatca
atcacgactcctgccacaccaagcactgcccctccacgatcacgaaaacctcaactgatg
cccagtattactcctccacgatcacggaaaccccaagccactcccagccgagccacaccc
actgaaagtacacgtccagtgccagcctctacagtgcaggtaaaaactccagacgcagaa
ataaataatgaagttgcagttgttggtcccagtggggactctgggatccgagaggaggaa
gtgcaacaaggaaatgaagtgggacgtggcaaaggtgcatcagatgttggggcggagcct
gatttgactggaaacacaatagatacaggaagttcagctgctcagcttcctcagaaaaac
atcttggaaaggaaagaagttttgatagcggtgattgttggaggtgtagttggtgcactc
tttgctgcattcctggtcatgttacttgtatatcggatgaaaaagaaggatgaaggcagc
tacactctggaagaacccaaacaagccacagtcacttatcagaaaccagacaagcaggag
gaattctatgcctaa

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