Ictalurus furcatus (blue catfish): 128600521
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Entry
128600521 CDS
T09387
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu04514
Cell adhesion molecules
ifu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128600521 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128600521 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ifu00535
]
128600521 (sdc3)
Proteoglycans [BR:
ifu00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
128600521 (sdc3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Syndecan
Plasmodium_Vir
FapA
Motif
Other DBs
NCBI-GeneID:
128600521
NCBI-ProteinID:
XP_053469047
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Position
24:complement(13700655..13735195)
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AA seq
444 aa
AA seq
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MKLPGWMAVALLLAHSVSTQRRSSQLEDLESSGNDLYDDEDYFSGSGSGDSVMETGSMSF
TTTEPLPLSTTQATGPAPSASPAAEPSNPLVIETERESGMDIERELEPEIEKKRAQQNEH
EQEMERVREREREREKEREREREIEREREREREREREREREREREREREREKERERARST
IAPRVPFVPMKTTDCVRIVNETFIPSEDMYVLGTAEEEEDGMFSTTETYPFESLTEDPVT
DDITTTEAAPTTIASTTAISITTPATPSTAPPRSRKPQLMPSITPPRSRKPQATPSRATP
TESTRPVPASTVQVKTPDAEINNEVAVVGPSGDSGIREEEVQQGNEVGRGKGASDVGAEP
DLTGNTIDTGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGS
YTLEEPKQATVTYQKPDKQEEFYA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccgggctggatggctgtggcgctgctgctcgcgcactctgtgtcgacacag
cgtcgctcatcacagctagaggatctggagagctctggaaatgacctgtatgatgatgaa
gactatttctctggttcaggctcaggtgactcagtgatggagacaggctccatgtctttc
accacaacagagcccctcccactttcaaccacacaggccactggacccgccccttctgcc
tcacccgctgcagagcccagcaaccccctggtgatagaaacagagagggagagtggtatg
gatattgagagggaactggagccagagattgagaaaaagagagcgcagcagaatgagcac
gagcaggaaatggagagagtgcgggaaagagagagagagcgagagaaggagagagagcga
gagagggagatagagcgagagagggagagagagagggagagagagagagagagggagaga
gaacgtgaacgcgaaagagaacgtgaacgtgaaaaagagagagagagggcaagaagtaca
attgcacccagagtcccctttgttccaatgaaaaccacagactgtgttaggattgtgaac
gagaccttcattcccagtgaggatatgtatgtccttggcactgcagaagaagaagaagat
ggtatgttcagtaccacggaaacctaccccttcgaatcactcacggaggaccctgtcaca
gatgacatcacaaccactgaagcggctcccaccactattgcttccactacagctatatca
atcacgactcctgccacaccaagcactgcccctccacgatcacgaaaacctcaactgatg
cccagtattactcctccacgatcacggaaaccccaagccactcccagccgagccacaccc
actgaaagtacacgtccagtgccagcctctacagtgcaggtaaaaactccagacgcagaa
ataaataatgaagttgcagttgttggtcccagtggggactctgggatccgagaggaggaa
gtgcaacaaggaaatgaagtgggacgtggcaaaggtgcatcagatgttggggcggagcct
gatttgactggaaacacaatagatacaggaagttcagctgctcagcttcctcagaaaaac
atcttggaaaggaaagaagttttgatagcggtgattgttggaggtgtagttggtgcactc
tttgctgcattcctggtcatgttacttgtatatcggatgaaaaagaaggatgaaggcagc
tacactctggaagaacccaaacaagccacagtcacttatcagaaaccagacaagcaggag
gaattctatgcctaa
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