Ictalurus furcatus (blue catfish): 128603781
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Entry
128603781 CDS
T09387
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifu03021
]
128603781
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
128603781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
128603781
NCBI-ProteinID:
XP_053474434
LinkDB
All DBs
Position
28:complement(15036543..15141497)
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AA seq
2114 aa
AA seq
DB search
MTTAANWVANGASLEDCHSNLFSLAELTGIKWRCYNFRGGGEYGPVISAPAQDDPVLCSF
TRCVQANLLCVWRRKLKPDAKELWIFWWGDEPNLSDIIHHELEVVEEGLWECGLSYECRT
LLFKAVHNLLERCLMDKDFVRIGKWFVKPYELEEKHLGASSSEHLSCSFSFFLHGESNVC
TSVEISQHQPVYHITEEHVRLAQTSSSPIQVILSPYGLGGTLTGQVFKMSDPAVRKLIEE
WSYFYPMVLKHSRGEQDSNLSYDPHSHVALEVIVGGVRMIYPAAFVLIAQADLPVEQPPP
AQGAQSGTRDSSNCGIPLTPPTSPEQPCSGDSGFQTAVSSVSSQESGATHSPKHSEKKLS
NQMVHQAWKECYMNQLQRKCNLSNGMVPKKEVTSEVAVWDFTDPGERAPCSCNRMRQQSK
QQQQTNGFSANSQPSTNPSSSSSSSSLSSSLPPPSTPKSKTADKADKSDKVSKRSAITPF
HHRLSVDQQPCPEQDAPPGPQLVLAALDTSLDTLPGCKYPKPMFTGRKGPESLLHSPVSP
LPPTLSPHPRVQDPEVMEAPMDVSQCLEGTSLPTAPEMSDTALYTASLVPREASGGWWKS
YRTPRVDKAELKPPELPYDMVEIKAEGEGTALKSFFAQTHKRFKISEERLQEHMSTLGFL
QQPGVEGLGEAGEDPYDFKEGDIEYSFPTTKRLKSRDPSRKSKGEEVNGNSAVPEGKDAM
SIFSSAPKFAEELAQDESGGKANPPLTREKDLIVLISDLENIFGEEEDDLGTTFPNHQQP
SKTVVPGAEERPLGIDGRVAVPYPSTVAELQRMFPTPPSLEQHPAFSPITTYRDTPSQET
PAPSAGHEHPLNTHTNNQLNDYRSEMDESMTSPKAEDIRPQMGCSMFAPLRSLPSQCLPP
LKIPEQCYYRPSWSMLPKMEPYCLPSQAPFVRDGYVNVPSIGALQDQDYAQMSTGTASVG
TAGGVLPSPATPRFSVPTPRTPRTPRGVGTASGQGSIKQDGTELSSPISTPSTGLPLSSV
EPLASGPVLPEAHSLYVILLLSDSVLDVFKDRSFDSCCICACNMNVKGADVGIYIPDSTR
EDQYRCMCGFSAIANRRLAHGAGLFLEDELDIFGRGSEAGRAAERRLALGRRDTPTGGKR
AQEQTPMEVLELIQEQCSQPILSVASLHSPAACSCRSRQRALLQSWVADRLWADGSDACV
ECYNALVQGLQYVDNAAGGKVEQALVRSSALHSWPHTNVLDISMLSSQDVVRMLLSLQPF
LQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGSYGSEESPEPLPIPTLLLGYDRDF
LALSPLALPFWEKLLLEPYGGQRDVAFLVLCPDNDILLTGARTFFQELSAVYESCRLGKH
HPLARMSRDGIVPVGAMESEKLEENGREVDEWMTGPWAGQYREDHLSKLKLYAQTCKQKL
APQLSALSLDSSLLLPPKPQPSSAPAPSTQLNPGSGAPEGETSATAAAAAGVPGSGNTPT
STSTSTGQASTEGADTLQSVPNTTPNQQSHPTESAESLAERERIGIPTAAQSADSHAYPP
AIVLYLVDPFLCSGSGVGSGEEEEAEEVESRSMWLLALLRCYTDMLSVLPENIQPALVLQ
VVPCQYLLQPASGESPLYLQHLRSLAFSAHSQCRRRLPTQTHIKSLTGFGPAATIDSLFK
SVENPSSMQVYSPPFVLAPLRTKQPEVGEEATTRYNVLFVGYCLSHDQRWILVSCTDQQG
ELLETCIINIDVPNRSRRPKFSPRKIGLQKLWEWCIGIIQMTAIPWRIVIGRLGRLGHGE
LKDWSLLLGEHSLHSISRQLREACRMCGISATDSPSILSACLVSMEPQGSFVVMPDAVTM
GSVFGRSTALNLQTSQLNTPQDASCTHILVFPTSSTTQVAPSSYPTEDNPDDIFGLPFTD
DLEKDIEHDMMLITGNLHASPNTSPVPSPGSPSGLGVGSHFPHTRSQGERLLSREAPEEL
KQQPLALGYYVSTAQAEGLPHWFWASCPQAQNQCPLFLKASLHHHISIAQTDELVSSKTS
QRNPHPLDSKTTSDVLRSAGNENTSHISLSLCWIMFCSVHLLIMDVPLNYQLINQHFDFY
NAVGIQQMADVSAS
NT seq
6345 nt
NT seq
+upstream
nt +downstream
nt
atgactacagcggcgaattgggtggcgaacggggcaagcctcgaagactgccattccaac
cttttctctctggcggagttgacgggcatcaaatggcgctgctacaacttccgtggcggc
ggcgaatacggacccgtgatctcggctccggcacaggatgacccggtgctgtgcagcttt
acacgctgcgtgcaagccaatttgctgtgtgtttggcgacgcaaactcaaacctgatgcc
aaggagctctggatcttctggtggggcgacgaacccaacttgagtgacatcatacaccat
gagcttgaagtggtagaagaaggactgtgggaatgtgggctttcctatgagtgcaggaca
ctcctcttcaaggctgttcacaacctactggaacggtgcctaatggacaaggactttgtg
cgcatcggcaagtggtttgtcaagccttacgagctcgaagagaagcacctgggcgccagc
agcagtgagcacctctcgtgctccttctccttcttcctgcatggtgagagtaatgtgtgc
accagcgtggagatctcacagcaccagcctgtctaccacatcactgaggagcacgtgcgc
ctggcccagacctccagcagtcccatacaggtgatcctgagtccgtacggactgggcggc
actctgacgggccaggtgtttaagatgagcgatccggcagtacggaagctgatagaagag
tggagctatttctaccccatggtgctgaaacacagcaggggcgagcaagacagcaacctc
agctacgacccccacagccatgtcgctctggaggtcattgtgggtggtgtgaggatgatc
tacccagcagccttcgtgctcattgcccaagctgatctgcctgtggaacagcctcctcct
gcccagggagctcaaagtggcactagagactcatcaaactgcggcattcccctcacccct
cccacgtccccagagcagccctgctccggtgacagcggctttcagaccgcagtctcgagc
gtgagcagtcaagagagcggagccactcacagcccgaagcattcagagaaaaagctgagt
aatcagatggtccatcaagcatggaaggaatgctacatgaaccaattacagcgcaaatgc
aatctgtcgaacggcatggtgccaaagaaggaagtaacaagcgaggtggcagtgtgggac
ttcactgacccgggggagagagccccatgcagctgtaacaggatgaggcagcagtcgaag
cagcagcagcaaacaaacggcttctctgccaattcccagcccagtaccaatccctcttcc
tcttccagctcttcttccttatcctcctctttacccccaccttcaacacctaaaagcaag
actgccgacaaagcagacaagtctgacaaggtatccaaacggtcagccataacccccttc
caccaccgcctctctgtagaccagcagccatgcccggagcaggacgcacctcccggacct
caactggtactcgcggccttggacacttctctggataccttgcctggctgcaagtaccct
aagcccatgttcactggcaggaaagggcctgagtctctcctccattctccagtatcacca
ctaccacctacactaagcccacaccctagggtgcaggaccccgaggttatggaggcgccc
atggatgtttcccaatgcctagagggcacttctctgcctacagccccggaaatgagtgac
actgctctgtatacagcctctctagtacccagagaagccagtgggggctggtggaagagt
tacaggactcccagggtagacaaagctgagttgaagccaccagaattaccctatgatatg
gtggagattaaagctgagggtgaaggaactgccttgaagagtttttttgcacagacgcac
aagaggtttaagatctcagaagagcggctccaggagcacatgagcactctgggattcctg
cagcagccgggagtcgaagggcttggggaagctggcgaagatccctacgacttcaaggaa
ggggacatcgagtacagcttccccaccaccaaaagactgaagagccgagatcccagtcgg
aaatcaaagggagaggaggtcaatggcaacagtgcagtccctgaagggaaagacgccatg
tccattttcagctccgctcccaaatttgcagaggaattggctcaagacgagtctggtgga
aaggccaacccgcctctgaccagggagaaagatttgatcgtgctcatatctgacttggaa
aacatctttggggaggaggaagatgatctggggaccacttttcctaatcatcagcagcca
tccaagactgtggtgccaggagctgaagagcgccccctggggattgatgggagagtagca
gtgccatatccctcaacagtagcagagcttcagcggatgttccccactcctccatctctg
gagcagcacccagcgttctctccaatcacaacctaccgagacacccccagccaagaaacc
ccagcaccctcggcaggacacgagcatcccctcaacacacacaccaacaaccagcttaat
gactacaggtctgagatggatgagagcatgacaagccccaaagcagaggacatacggcca
cagatgggttgttccatgtttgctcccctccggtcattacccagccagtgtcttccccca
ctgaagatccctgagcagtgctactacagaccctcatggtccatgcttcccaagatggag
ccctactgcctcccgagccaggctccttttgtacgagatggctatgttaatgttccaagc
atcggcgctctgcaggaccaagactatgcccagatgagcactggtaccgcctctgttggc
acagcaggtggagtcttgccttcaccagcgacaccccgtttctccgtccctaccccgaga
accccgcgcaccccacgtggtgtaggcactgccagtgggcagggctcgatcaagcaggac
ggtacagagctgagctcgcccatttccacaccgtccaccggcctacccctaagctcggtg
gagccactggcgtcagggccggttttgcccgaagcgcacagcctctacgtcatcctgctc
ctctctgattctgtcctggatgtattcaaggaccgcagctttgacagctgctgcatctgt
gcttgcaatatgaacgtgaagggtgctgatgtgggtatttatatccctgactccacccgt
gaggatcaatatcggtgtatgtgtggcttcagcgccatcgctaaccgacgtttggcgcac
ggtgccggactcttccttgaggatgagctagatatctttggacgcggctcagaggcggga
cgggcagccgagaggaggttggcactgggcaggagggacacgcctactggcgggaagcgg
gcccaggagcagacgccaatggaggtgttagaactgatacaggagcagtgttcccagcct
atcttgtctgtggcatcactacatagtcctgctgcttgttcttgccgtagcaggcagagg
gcactgttgcagagctgggtagccgatcggctgtgggcggacggtagtgatgcatgtgtg
gagtgttacaacgctctggtgcaggggctgcagtatgtggacaatgcagctggtgggaag
gtggagcaggctttagtgaggagcagtgccctgcactcctggcctcacacgaatgtgttg
gatatcagcatgctgtcctctcaggacgtagtacgcatgctgctatctctgcagcccttc
ctgcaagatgccattcagaagaagcgcactggccggacctgggaaaacatacagcacgta
cagggcccactcacatggcaacagttccacaaaatggctggacgaggttcctacggttcg
gaggaatctccagagccgctccccattcctacactgctgttggggtatgaccgagatttc
ctggccctgtcccctctggctctgcccttttgggagaagttgcttctggagccctatggg
ggtcagagggatgttgcgttcctggtcctctgccccgataatgacatccttcttactgga
gccagaaccttttttcaggagctcagtgctgtctatgagtcatgtcggttggggaagcac
catccgctggcccggatgtccagggatggcatagtaccagtaggggcaatggaatctgaa
aagctggaggagaatggacgagaggtggatgagtggatgacagggccatgggcaggtcaa
taccgagaggatcatctaagcaaactcaagctctacgcccaaacctgcaaacagaaatta
gccccacagctctcagctctgtcattagacagcagtcttctcctgcccccgaagcctcaa
cctagctcagctcctgccccttccacacagctgaaccccggctccggggcccccgaagga
gaaacatcagcaacagcagcagcagcagcaggagtccctggatcaggaaacacgcccaca
tctacgagtactagcacaggccaggccagcacagaaggtgcagataccttacaaagtgtc
cctaacacaacgccaaaccagcagagccatccgacagagagcgccgagagcttagcagag
cgagagcgaatcggcattcccacggcagcacagtcagcggatagccacgcctaccctcca
gccatagtgctgtacctggtggacccctttttgtgctcgggctcaggggtggggtcaggg
gaggaagaggaagcagaagaggtggagtcacgcagcatgtggttgctggcgcttctgcgc
tgctacacagatatgctgagcgtgctgccggagaacatacagccagcgctggttctacag
gtggtgccgtgtcagtacctgttacagccggccagtggtgagagtcctctgtacctgcag
cacctgcggtctctggctttctctgcccactcgcagtgcagacgccggcttcctacacag
acgcacatcaaatccctcacaggctttggtccggctgccaccattgactcattattcaag
agcgtggagaaccccagctctatgcaagtgtactctcctccgtttgtcctggcccccctg
cgcactaagcaaccagaagtaggggaggaagctaccacacgctacaacgtgctctttgtg
gggtactgcctgtcccatgaccagcgctggatccttgtttcttgcactgatcagcagggg
gagctcctagagacctgcattatcaacattgatgtccccaacaggtctcgtcgccccaag
ttttccccgcgcaaaataggcctgcagaaactgtgggagtggtgcattggtatcatccaa
atgacagcaattccttggaggattgtgatcgggcgcttgggtcgattaggtcacggcgag
ctaaaagactggagtctgttgctgggtgaacactctctacactcgattagcaggcagctg
cgtgaggcatgtcgcatgtgtggcatttcagccaccgattccccgtccatcctcagtgcc
tgcctggtctccatggagccccaggggtcctttgtggtcatgccagatgctgtgactatg
ggttcagtgtttggccgcagcacagctctcaacctgcagacgtctcagctcaacacccca
caggatgcttcctgcacccacatcctggtctttcccacttcctccaccacgcaagtggcc
ccgagttcctaccctactgaggacaacccagatgatatatttggcttgccgttcacggac
gacctggagaaagatattgagcatgatatgatgctgatcaccggaaaccttcacgcttcc
cctaacacctcgcctgtgccttcccctggctctccctctggtctgggggtgggctcccac
ttccctcacactcggagtcagggtgagcggttgttgtctcgtgaggctcctgaagagctg
aagcagcagcccctggctttaggctattacgtctccaccgctcaggcagaaggactgcct
cattggttctgggcctcgtgtcctcaagcgcagaaccaatgcccgctctttctcaaggcc
tctctgcaccatcacatctccatagctcagacagacgagcttgtctccagcaagacgtcc
cagaggaacccccatccactggactccaaaaccacttcagatgtgctcaggtcagcagga
aatgaaaacacatcacacatcagtctgtccttgtgctggattatgttttgttctgttcac
ttgttaataatggatgtcccattaaactatcaactcattaatcaacactttgatttttat
aatgcagtaggaatccagcagatggcagatgtaagtgcaagttag
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integrated database retrieval system
