Ictalurus furcatus (blue catfish): 128617523
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Entry
128617523 CDS
T09387
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03440
Homologous recombination
ifu03460
Fanconi anemia pathway
ifu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128617523
09124 Replication and repair
03440 Homologous recombination
128617523
03460 Fanconi anemia pathway
128617523
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ifu01009
]
128617523
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128617523
03036 Chromosome and associated proteins [BR:
ifu03036
]
128617523
03400 DNA repair and recombination proteins [BR:
ifu03400
]
128617523
Enzymes [BR:
ifu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128617523
Protein phosphatases and associated proteins [BR:
ifu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128617523
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128617523
Multi subunit Ring-finger type E3
BRCC complex
128617523
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
128617523
DNA repair and recombination proteins [BR:
ifu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
128617523
BRCA1-A complex
128617523
BRCA1-B complex
128617523
BRCA1-C complex
128617523
BRCA complex
128617523
FA (Fanconi anemia) pathway
Downstream FA components
128617523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-C3HC4
BRCT_2
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-Nse
TRAF3_RING
zf-RING_6
zf-RING_10
RTT107_BRCT_5
zf-RING_4
zf-MIZ
zf-ANAPC11
Baculo_IE-1
zf-rbx1
Sina_RING
TF_Zn_Ribbon
Motif
Other DBs
NCBI-GeneID:
128617523
NCBI-ProteinID:
XP_053496647
LinkDB
All DBs
Position
13:494794..508313
Genome browser
AA seq
1373 aa
AA seq
DB search
MSVAKAEDVKRGIAVIWENLQCPICLDLMSEPVSTRCDHQFCKFCMTKLLESSKRKETSC
PVCKTKVTKRSLKESPGFQKLVEGLQNLVRSYEFDTCTNYFTGSPQSRRGASVETEPRGQ
LGSGENTTPTSEGDVTEKEATVSSTTAAKDAFAKLMSLEDSHPVSSEPGCLDRSPEDLPR
HSQIKPEDVPSPTRLDVTPDDGKHSRRRSKRLCLEPDRITGKRQKKSVQKVSEWLLRISP
GFDAPTESDEQGVLPMLTDSDAEKESTASCASTEISAPADNKADASPVREVPSRGLEEQV
FGAVYKRERKAVKITKVTTSFSPERQLAPVGGLSETVDKIEAPERRSGRTSTISKSSNEG
REDQEDDDEGSKQENGSKLEKVVPDENAENTEESPAFEVPLKKPGRRAKMQEVWQDVDRD
LTEKESNADDEKDRKRRITRSSRGAASYDDLEKSKNAKYAKSLALVSAGTEMVDSREKVP
SNPELIETEVNIESYPSSTEPRSPDARKTRRSSRLQEFAAEVQGLPRRRRSKPVLPKPAD
GQGNNPSANLDEPGVKTGRVGQLIASQIETPGRSARRNGCVYNDDFEKIEIMRSSEDAAA
PERVSSEGTAAEENSLASVLPDTLDRDERVIPRSIKVVNSTSPLAVLVPESLPHKRQKSS
PCTKTLMDTEQEDDTNDSELDTEQLVKSFKATKRKSFYLGSPRTSRSRTQEKSLPQILEE
DQQERVDQAEIPGICPDSDLPSGACELAPQEITSQTSQSRIADVASASLLPVNSPALPSL
PKETQKDNSIKTSGASDHLKKVAKSSRSQESRPPVNVDLANSVQLFSTSVTQEEPQPSRS
KDSTESSEIQGNEISSIPLGSVTNSEMPCNHFESSVTPDGLVQNDPEVLVIEPATTRNSD
NTDEGEILSQPRLHRKRKAQRLESSDSESSDDHEDLPPLAQIFKSHRPSSPSAKDPLKSS
LNRDEERSLKPGLDPVSQDSCSRAEPEAQSSSASQSVAPYQTREPLEDLQDGGVPDPAYR
DDWITSSQGSVDLFGTPREREEAVDGVCANAGLSIEASQYSSEIINTQQREEMQQELHRL
ERMMVLVSEALQKKDHDQHAGPRGRLRSQRSCKSVRQRSLRSEVKGQDAAPEDSTIDVAV
EKKPNEPRGETLGERSLQNECRTGSEGRMELVVSGLSATEQGLVKKFARKMKAVVSSQVT
PTTTHIIIKTDGDLVCERTLKYFQGIAGRKWVVSVLWISECFKHGKRLAEAPYEVCGDVV
NGRDHNGPRKARTAPDNDLLMKGCEICFQGSFTDMTTDQMEVMVELCGATVVKDPLMFSR
KGIRYQLVVVQPNPDDSQSYYAALQRKATVVTRSWLLDSVATYTLQNPPDYKP
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggcgaaggcagaagacgtgaagagaggtatcgctgtgatttgggagaacctg
cagtgtccgatatgtttggatctgatgagcgagcccgtctccacccgctgtgaccatcag
ttctgcaagttctgcatgaccaagctgctggaaagcagcaagaggaaagaaacgagctgc
cccgtgtgcaaaaccaaggtcaccaagaggagtctgaaggaaagtccaggcttccagaaa
ctggtagaaggcctccagaatttagttcgttcttacgaatttgacacgtgcaccaactat
ttcactggatcgccacagagcagacggggcgctagcgttgagacggagccgagaggtcag
ctgggcagcggagagaacacaacgccaacctcagaaggagacgtgacagagaaagaagcg
acggtttcctccacgacagcagctaaagacgctttcgcaaagctcatgagccttgaagat
tcacatccggtctcttcagaaccaggttgcttagaccgcagtcccgaggatttgccgcga
cattcacaaataaaacctgaagatgttccttcaccgacacggctggacgtcactccagac
gacgggaaacactcccgcagaagatctaaacggctctgtttggagccggacaggattacg
ggtaaaagacagaagaaaagtgtgcagaaagtgtcagagtggttgctgaggatctctccg
ggttttgacgcaccaactgaaagcgacgagcaaggagttcttccgatgttgacggacagt
gatgctgaaaaagagagcacggcctcatgcgcgtcgacggagatcagcgctcctgctgat
aataaagccgacgcgagtcctgtaagggaagtgcctagtcgaggtctggaagagcaagtg
ttcggggcggtgtataaacgcgagcgcaaagctgtcaagatcaccaaagtcaccacaagt
ttctctcccgaaagacagctcgcacctgtcggaggtttatcggaaacggtcgacaagatc
gaggctcccgagaggaggtcgggccgtacgtcgactatcagcaagtcgtcaaacgaaggt
agagaagatcaggaggacgacgacgaaggaagcaaacaagaaaacggcagtaagctggaa
aaggtggtacctgatgaaaacgctgaaaatacagaagaaagcccagcgtttgaggtacct
ttgaagaaaccagggaggagagcaaagatgcaggaggtttggcaagatgtggaccgtgac
ttgacggaaaaagaaagcaacgcggacgacgagaaagatcggaagagacggatcaccagg
agcagccgcggtgctgccagttacgacgatttggaaaaaagcaaaaacgccaaatacgcc
aagtcgcttgctctcgtcagtgctggaaccgagatggtcgattcaagggagaaggttccg
agtaatcccgaattaatcgagaccgaggttaatatcgaaagttatcctagtagcacagag
ccgcggtctcccgatgctcggaaaacccgacgaagctcaaggctgcaggagttcgctgca
gaagttcaaggtcttccgagaagaagacgatctaaaccggttctcccaaaacctgccgac
ggtcaagggaacaatccgtccgctaacctggacgagccaggcgtgaagactggtcgcgtc
ggtcagcttatcgcttcgcagatcgagacaccaggacggtccgcgaggagaaacggttgt
gtttacaacgatgactttgagaagattgaaatcatgcggtcgagcgaggacgcggccgct
cccgagcgtgtgtcgtctgaggggaccgcggctgaagaaaactcgctcgcttccgtcctc
ccagacacgctggatcgagatgagcgcgtcatccctcgttccatcaaagtcgtaaactcg
acgagtccgttagcggttctggttccagagtctttaccgcataaacgtcagaaatcatca
ccgtgtacaaaaacgttgatggatacagagcaagaagacgacaccaacgatagtgaactt
gacaccgagcaactcgtgaagagcttcaaagccaccaagagaaaatccttctacctgggt
agtcccagaacttcacgttccagaacccaagagaaatcccttccccagattttagaggaa
gaccagcaagagcgtgtagatcaagcagagataccaggcatctgtccggacagcgatcta
ccctcaggtgcttgtgagctagcgccacaagagataacatctcaaacatctcaaagccgt
attgcagatgtcgcaagtgccagtctgcttccggttaactcccctgctcttcccagtctt
cctaaagaaacccaaaaagacaattccataaagacctcaggtgccagtgaccatctcaag
aaggttgcaaagtcctcaagatctcaagaatccaggcctcctgtcaacgttgatcttgca
aattcagtccagctcttctctacaagcgtgacccaagaggaaccccaaccctctcgcagt
aaagactcaacagagtcttcagaaattcaagggaacgaaatttccagcatcccactggga
agcgtgaccaactctgaaatgccgtgtaatcattttgagtcctccgtcaccccagacggc
cttgtacagaacgatcccgaagttctggtcatagaacccgcgaccacacggaactccgat
aacacggacgaaggagaaattctatcacagccacgtttgcatcggaagaggaaggcccag
agactggagtcttcagattctgaatccagcgacgatcatgaagacttacccccgctagcc
cagatatttaaatctcaccgtccgtcctcgccgtctgccaaagatccactgaaaagctct
ttaaaccgagatgaagaacgaagcctgaagccaggtttagaccccgtgagtcaggatagc
tgctctcgcgccgaaccggaagctcagtcaagttctgcaagccaaagcgtcgccccttat
cagacacgcgaacctctagaagatctacaagatggcggtgttcctgaccctgcttacaga
gacgactggatcacttccagtcaaggatctgtggatctttttgggacaccacgcgaacgt
gaagaggcagtcgacggtgtctgtgcgaacgcggggctttccatcgaggcgtcgcagtac
tccagcgagatcattaacacgcagcagagagaggagatgcagcaggagctgcacaggttg
gagagaatgatggtgttagtgtctgaggctctgcagaagaaagaccacgaccagcacgca
gggccgcgaggtagactgagaagtcagcgatcctgtaaaagcgtaaggcaacggtctctg
aggtcagaggtcaaaggtcaggacgccgcgcctgaggattcgaccatcgacgtggcggtg
gaaaagaagccgaacgagccgaggggagaaaccctaggagaacgttcgctacagaacgag
tgcaggacaggaagtgaaggcaggatggagctggtggtgtcggggctcagtgccactgaa
cagggcctggtgaagaaatttgcgaggaagatgaaggcagttgtaagcagtcaggtcact
cccactacaactcacatcatcatcaaaacagatggagacctggtgtgtgagagaacgttg
aagtacttccagggcatcgccggcaggaagtgggtggtgagcgtcctgtggatctcggag
tgcttcaaacacggcaaacgtctggctgaagctccgtacgaggtctgcggcgacgtggtt
aacggacgcgaccacaacggaccccgaaaagcccgaaccgctccggataatgacctgctg
atgaaaggatgtgagatctgcttccagggctccttcactgatatgaccacagatcagatg
gaggtcatggtggagctgtgtggagctacggtcgtgaaagacccgctgatgttctccaga
aagggtatccgttatcagctggtggtggttcagcctaaccctgacgactctcagtcatac
tacgcagctctacagaggaaagccaccgtagtgactcggagttggctcttggactcggtc
gccacgtacacgctccagaatccaccggattataaaccgtga
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integrated database retrieval system
