KEGG   Ictalurus furcatus (blue catfish): 128623723
Entry
128623723         CDS       T09387                                 
Symbol
kdm5a
Name
(RefSeq) lysine-specific demethylase 5A isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ifu  Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:ifu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ifu01009]
    128623723 (kdm5a)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ifu03036]
    128623723 (kdm5a)
Enzymes [BR:ifu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     128623723 (kdm5a)
Protein phosphatases and associated proteins [BR:ifu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     128623723 (kdm5a)
Chromosome and associated proteins [BR:ifu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    128623723 (kdm5a)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID JmjN zf-C5HC2 ASH2L-like_WH PHD_5
Other DBs
NCBI-GeneID: 128623723
NCBI-ProteinID: XP_053506854
LinkDB
Position
19:complement(12970627..12996409)
AA seq 1708 aa
MAVYTEFLPPPECPVFEPSWEDFSDPLGFISKIRPIAEKSGICKIRPPQDWQPPFACDVR
NFRFTPRVQRLNELEALTRVKLNFLDQIAKFWELQGSKLRFPHVERKILDLYLLSKIVSS
EGGFEAVCKEKRWSKIATRMGFPAGKGTGSLLRSHYERILYPYELFQSGASLSGIHRLCQ
EGDEAEEMDEGIERGCEEDEEDEEEKPKEKEGKERDSLSDKSQKKEHTLPERRSRRLKSE
RENKEPKGLQIFSSSPKVVDFEIVPADDAFIKKQKHLKAQAFAIKMRPRRETLEVNFIDL
YMCMACGRGDEEDRLLLCDGCDDSYHTFCLIPPLQDVPKGDWRCPKCVAEECSKPREAFG
FEQAVREYTLQSFGEMADHFKSDYFNMPVHMVPTELVEKEFWRLVSSIEENVIVEYGADI
SSKDVGSGFPVRDGKRRLLGDEEDYTNSGWNLNNMPVLEQSVLAHINADISGMKVPWLYV
GMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPAHAAEQLEAVMKKLAPELFDSQPDLL
HQLVTIMNPNVLIEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLP
MGRQCVAHYRRLQRHCVFSHEELLCKMAADPESLDVELAAAVCRELTEVIDEESRLRQAV
QDMGLQSSEQEVFELLPDDERQCYRCKTTCFLSALTCSCSPDRLVCLHHAAELCSCPLTS
KCLRYRYDVEEFPAMLYGVKSRAQSYDTWAKRVSEALSADQKNKKDLIELKVLLEDAEDR
KYPENNLFRKLREMVKEAETCSSVAQLLLNHKQRHKRERTEISRTRTKLTVEELKAFVEQ
LFRLPCIISQARQVKELLENVEDFHERSQLALADETPDSAKLQVLVELGSGLDVELPELA
RLKQELQQARWLDEVRLTLHEPQRVTLELMKRLIDSGVGLAPHHAVEKAMAELQEILTVS
ERWEDKARACLHARPRHSMVTLESIVVEAKNIPAYLPNVLALREALHKAKEWTARVEAIQ
NGTSYAYLDQLEALLARGRSIPVRLDALPQVESQVASARAWRERTARTFLKKNSTYTLLQ
VLSPRADIGVYGSSRSKRRRAKELLEKERGAEPESLSDLDEAADEERSPSAVVAAFKAQE
QQEAEAMHSLRAANLAKMSMAERIDEVRFCLCRKTAGGVMLQCELCKDWFHGACVPLPKA
GTQKKLTTGSSWQSASKESKFLCPLCQRSRRPRLETILSLLVSLQKLPVRLPEGEALQCL
TERAMGWQDRARQALATDELSSALAKLSVLSQRMVELAAREKTEKIINAELQKAAANPDL
QGHIQTFQQAGFNRTTSPRPFVDYDDEETDSDEDIRETYGYEMKDPGEVKPYLFCDEEIP
VKSEEVVSHMWPATPSFCAEHAYSSASKSCPQNPTTPRKQPRKTPLVPRSLEPPVLELSP
AAKAQLEILMMEGDLLEVSLDETQHIWRILQATHPPSEERFLQVESEYTLLEKPMKLKVK
EMEKKRKRKLERAEQQLLLASSGVEGRPKCKDIKRVLEVGGKPKKKKLKLSPEKSRELKQ
LAKRLAKEEKERKRKEKAAAKAEFAKEGLEKKKEKKILDIPSKYDWSGAEDSNDENAVCA
AKNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSCEMAENEDYICSACQRKAGGVIGVKVG
VETVVMTSAMCTTQTLSPLYQAEVQDGS
NT seq 5127 nt   +upstreamnt  +downstreamnt
atggctgtgtatacggagttcttgcctcctcctgagtgcccggtgtttgagccgagctgg
gaggatttctctgatccactcggcttcatcagcaagatcagacctatcgcagagaaaagc
ggcatctgcaagatcagaccacctcaggactggcagcctccttttgcttgtgatgtgcgc
aactttcgcttcacaccacgagttcagcggctcaacgagcttgaggccctcaccagagta
aaactcaacttcttggatcaaattgcaaagttttgggaactgcagggctccaaactacgc
tttccacatgtggagagaaaaatcctggacttgtatcttctcagcaagattgtgtcttct
gagggaggttttgaagccgtctgtaaggagaagcgctggtccaagatagccactcgcatg
ggtttcccagccgggaagggcaccggttctctgctgcgctctcactacgagagaatcctc
tacccatatgagctgttccagtctggagcttcactctccggcatccaccggctgtgtcag
gaaggagacgaagctgaagagatggatgaaggaatagagcgtggctgtgaggaggatgag
gaggatgaagaagagaaacctaaagagaaggaaggcaaggagcgagacagtctgagtgac
aagtcgcagaagaaggagcacactcttcctgagagacgttcacgacgcctgaagtctgag
agagagaacaaagagcccaaaggcctacagatctttagcagcagtcctaaggtggtggat
tttgagatcgttccagccgatgatgctttcataaagaagcagaagcacctgaaggctcaa
gcgtttgctattaagatgcgtccacgcagggagaccctggaggttaattttattgacctg
tacatgtgtatggcatgtgggcggggtgatgaggaggaccgcctcctgttgtgtgacggc
tgtgatgacagctaccacaccttttgccttatcccaccccttcaggatgtgcccaagggt
gactggcgttgtcccaagtgtgtggcagaggagtgcagcaagccccgggaggcatttggg
tttgagcaggccgtgcgtgaatacacactccaaagctttggagagatggcagaccatttt
aaatccgactacttcaacatgccagttcatatggtccctacagagctggtggagaaagag
ttctggaggctggtaagcagcatagaagagaatgtgatagttgagtacggagcagatatc
agctccaaagatgtagggagcggctttcctgtccgagacggaaaaagaagactgttgggg
gatgaggaggattacaccaactcaggctggaacctgaacaacatgccagtgctggagcaa
tctgtgcttgcccacattaatgcagacatctcggggatgaaggtaccctggctttacgta
ggcatgtgcttctcttccttctgttggcacatcgaggaccactggagttactccatcaac
tatctgcactggggagagcctaagacctggtacggagttccggctcatgcggcagagcag
ctggaggcggtgatgaagaaactggcaccagagcttttcgactctcagcctgatctactg
caccaactggtcaccatcatgaaccccaacgttctaatagagcatggtgttccagtgtat
cggactaatcagtgcgctggagagtttgtggtgaccttcccgagagcctatcacagcggc
ttcaaccagggctacaactttgctgaagctgtcaacttctgcactgcagactggctaccc
atgggccgtcagtgtgttgcgcattaccggcgactgcagcgtcactgcgtgttctcccac
gaggagctgctgtgtaagatggctgcagaccctgagagcctggatgtggagctggcagca
gccgtgtgccgagaactgaccgaggtgatagatgaggagagcagactccgacaggctgtg
caggacatggggttgcagtcctccgaacaggaagtgttcgagctgcttccagatgatgag
cggcagtgttacaggtgtaaaaccacctgcttcttgtctgctctgacgtgctcgtgcagt
ccagatcgccttgtctgtttgcaccatgctgcggagctctgcagctgtcctcttacaagc
aaatgcctcaggtaccggtacgacgtggaggagttccctgccatgttgtatggggtaaag
tcacgcgcccagtcctatgacacctgggccaaaagagtcagcgaggcactgtcagctgat
caaaagaacaagaaagatctgattgagcttaaggtgttgctggaggacgcagaggacagg
aagtaccctgagaacaatctgttccgtaagctgagagagatggtgaaggaggcggagacc
tgctcttctgtagcccagcttctgctcaaccacaaacagagacacaaaagggagcgcacc
gagatcagtcgtactcgcaccaagctgactgtggaggagctgaaggcgtttgtggagcag
ctgttccgtctgccatgtatcatcagccaggcacggcaggtcaaagagctgctggagaac
gtggaggatttccatgagcgctctcagctggccctggcagatgagaccccggactcagct
aagctgcaggttctggtggagctgggctcggggcttgacgtggagctaccagagctggca
cgattgaagcaggagctgcagcaggcacgctggctagatgaggtgcgtctcaccctgcac
gagccacagcgcgtcacgctcgagctcatgaagcgcctcatcgattcaggcgtgggtctg
gccccgcaccatgctgtggaaaaagccatggctgagcttcaggaaatcctcactgtgtct
gagcgctgggaggacaaggcacgtgcatgcctgcatgccagacctcgccatagtatggtc
accctcgaaagcatcgttgtagaggccaaaaacatccctgcctatctgcctaatgttctg
gctctccgggaagctctccacaaagccaaagagtggacagcaagagtcgaggccatccag
aatggcaccagttatgcatacctggatcagcttgaggctctgttggcgaggggccgctcc
attcctgtgcgtctggacgctctaccacaagtggagtcccaggtggcttcagcacgagct
tggagagagaggacagcgcgcacctttcttaagaaaaactctacctacacgctgctacag
gttctgagtccccgggctgacattggtgtgtacggcagcagcagaagcaagcgcagacga
gcgaaagagctgctagagaaagagcgtggtgcggagccagagagcctgagtgacctggat
gaggctgcagacgaggaacgctcaccctctgctgttgtggctgcctttaaggctcaggag
cagcaggaggcagaagccatgcactcgctgcgggctgccaacttggccaagatgagcatg
gccgagcgcatcgatgaggtccgcttctgcctgtgccgcaagacagccggaggtgtaatg
ctacagtgtgagctgtgcaaagactggttccatggcgcctgtgtgcccttgcccaaagca
ggcacgcagaagaagctaacaacaggcagcagctggcagagtgctagcaaagagtcaaag
tttctgtgccccctatgccagcgttcaaggcgaccccgactcgagaccatcctatcgtta
ttagtctccctgcagaagcttcctgtgcggctgcctgagggcgaggcgctgcagtgtttg
acggagcgtgccatgggctggcaggaccgggcgcggcaagccctggccaccgacgaactc
tcctctgctctggccaagctgtctgtgctcagccagcgcatggtggagctcgcagcccgc
gagaagactgagaagatcatcaacgccgagctgcagaaagctgctgccaatccagaccta
cagggacacattcagacgttccagcaggccggatttaacaggaccacctcaccacggcca
tttgtagactacgacgacgaggagacagactcggatgaggacatccgtgagacttatggc
tatgaaatgaaggacccgggtgaggtaaagccctacttgttctgtgatgaggagatccct
gtgaagtcagaagaggtagtcagtcacatgtggccagccacaccctcgttctgtgctgaa
cacgcctactcctctgcctccaagtcctgcccccagaatccaaccactccacggaaacag
cccaggaagacgcccctggttccacgcagtttggagcctcctgtgctggagctgtccccg
gctgccaaggcccagctggagatactgatgatggagggagacctgctggaagtctctctg
gatgaaactcaacacatctggagaatcctgcaggccacgcacccaccctcagaggagcgc
ttcctgcaggtggagtcggagtacacgctgctggagaagccaatgaagctaaaggtaaag
gaaatggagaagaagagaaagaggaaactggaaagagccgagcagcagttactcttggcc
tcgtcaggcgtggaaggccggcccaaatgcaaagacataaagagggtactcgaggttggt
ggcaagcccaaaaagaagaagctcaagctcagcccggagaagtcacgcgagctgaagcaa
ctggccaagcggctcgccaaggaggagaaggagaggaagaggaaagagaaagctgcggcc
aaagccgagttcgccaaggagggtctggagaagaagaaggagaagaagatcttggacatc
ccctctaagtatgactggtcaggtgcagaggactccaacgacgagaatgctgtctgtgca
gcgaagaactgccagagaccatgcaaggataaggtggactgggttcagtgtgatggtgga
tgtgatgaatggttccatcaggtatgtgtaggtgtgtcatgcgagatggcggagaacgaa
gactacatctgctcggcttgccagcgtaaggctggcggagtgattggagtcaaagtgggc
gtagagactgtggtaatgacgtcagccatgtgtaccacacagactctctcccccctgtac
caagcagaggttcaggacggcagctaa

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