Ictalurus furcatus (blue catfish): 128624214
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Entry
128624214 CDS
T09387
Symbol
trpa1a
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1a
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ifu04040
]
128624214 (trpa1a)
Ion channels [BR:
ifu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128624214 (trpa1a)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
DUF3447
DUF5798
Motif
Other DBs
NCBI-GeneID:
128624214
NCBI-ProteinID:
XP_053507653
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All DBs
Position
20:751344..766808
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AA seq
1128 aa
AA seq
DB search
MRPSRSPPKFTHEYLSLKDMDRNSCTSMNVFEVSDFIVKDDLTHISPCGLLIGVFLQWAL
EGNVPALEGQSGNLNTRDGGGATPLHYASSKGHIRVINLIVRIAGSQELDVVDDEGNTPL
HWAVQQDQSGSCSALLSLGANPNILNKASLSPLHLAVSLRHNHIVEQLLTHSGTDVNLED
DLGNTPLLLAASVDNHEALLILHKNGARLCCQNKLGHFPIHAAAFSGAKRSMEVVLQKGE
EIGVPTEIHINYVDKSTSSPLHLAVRGGNLEVIKLCIAHGAKIDQQQCDKATALHFACTQ
GATEAVKVMLQAYERVYDIVNITDGAFQTPLHKAAIFDHYELVEYLISQGADIDSTDCKG
HSPLLLATSCGAWRSVNLLLSHGADLTVKDKTGCNFLHLAILQPRGLKNLPADVLEHKTV
RELLNDEDSEGCTPLHYACRLGIPDSVKNMLGLEVSLDQKSKQKKSALHFAAEYGRINTC
HRLLETMTDTRLLNEGDEKGMTPLHLASRGGHVKVVELLLRKGALFHSDYKGWTCLHHAA
AEGYTQTMDSLLISNIKLLDKTDGDGNTALHLAARAGHVAAVRLLLSRGAQILLNRCDAS
FLHEAIHNGRKDVTSAVIDSDRCEEAITMFKVNSAKRCAVLDMIEFLPECCKHLLDSCIK
ESEEDVNSCGYYLEYNFQWLQQPIQYTKDMEKSEKEDENKPLAALNAMVEFNRVELLTHP
VCKKYLEMKWHAYGVKAHLLNMTMYTLGVFPLTYLIVHLRPELKVEKNVTTVNMVTKRLD
EQCYFITTCMFLVLAMNLYAVGKEVVQMFQQRFKYLQDASNVMDWGSTICSLLFVIPLLL
NVKKSWHWQAGALASLGSWVNLLLYLQRFQRFGIYVVMFREICKTLLSIILIFVYLILAF
ALAFYALMIEQKHFGRMFLSLMQTFAMMAGEINYQDNFMKPYMARHLPFPVLTYFIFIWF
VLLVPILLMNLLIGLAVGDIAEVKNNACLKQIGMQIELHTNLEERLPSWFVKKVDQISVK
EFPNKCYKGKRWFFCGGEVNKVRARLSSSTRQCTQLERELTKQKHRLKDLSESMEKQHNL
LKLIVQKMEISSEAEENDGPRVLRDFTHKLSARSKWGPLLRAVTAKRK
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccgtcccggtctccgccgaagttcactcacgaatacctgagtctgaaggacatg
gacagaaacagctgcacgtcgatgaacgtcttcgaggtttcagattttattgtgaaagat
gatctgacgcacatttccccatgcggattgctaattggtgtttttttacagtgggctttg
gagggcaacgtcccggcactggagggtcagtcgggtaacctgaacacgagggatggcggc
ggtgccaccccgcttcactacgcctcctccaaaggccacatccgagtcatcaacctcatc
gtacggatcgccggctcacaggagctggacgttgtggatgatgaaggaaacactcctctg
cactgggccgttcagcaggatcagagtggaagctgttcggctctgctgagtctcggagcg
aatccaaacatcctgaacaaagcgtcactctcaccactgcacctcgccgtcagcctcaga
cacaaccacatagtggagcaactcctgacacacagtgggacggatgtgaacctggaggac
gatctgggaaacacacctttacttctggccgcttcagtggacaaccatgaggcgcttctc
atactgcacaagaacggcgccaggctgtgctgccagaacaagctgggtcacttccccatc
cacgccgccgccttctcaggagccaagagatccatggaggtggttcttcaaaaaggggag
gagataggcgtgcccactgagatacacataaactacgtggacaaatccaccagcagtcct
cttcatctggccgtacgtggaggaaacctggaggtcatcaagctctgcatcgcccacgga
gccaaaatcgaccagcagcagtgtgataaagccaccgctctccactttgcgtgcactcag
ggagccactgaagccgtgaaggtgatgctccaggcgtacgagagagtgtatgacatcgtc
aacatcaccgacggagcgttccaaacaccgctgcataaggcggccatttttgaccactac
gaactggtggagtatctaatctcacagggcgccgacatcgactccaccgactgtaaaggc
cactcgccactgctgctagcgaccagctgcggcgcctggagaagcgttaacctgctgctg
tcacacggtgctgatctgacggttaaagacaagactgggtgtaacttcctacatctcgcc
atcttgcagcctcgaggtctgaagaaccttccggcagacgttctggagcacaagactgtg
agagagctgctgaacgatgaagactcagagggctgcactcctcttcactacgcctgcagg
ctgggaatccctgactcggtgaagaacatgctcggcctggaggtctcactcgaccagaag
tccaagcagaagaaatcggctttacactttgcagctgagtacgggaggatcaacacgtgt
caccggctcctggagaccatgacagacacacgtctgctgaacgagggcgatgagaagggc
atgacaccgctacacctggcttcacgcggcggccatgttaaagtggtcgagctgctcctc
aggaaaggtgctctgttccacagtgattataaaggctggacctgtttacatcacgccgcg
gctgagggatacacgcagaccatggacagcttactcatatccaacatcaagctcctggac
aaaaccgatggagacggaaacacagcactgcacttagccgcacgagccggacacgtcgct
gcggtccgcctgctgctgtcgcgaggggctcagatcctgctgaaccggtgcgacgcctcc
ttcctgcacgaggccatacacaacgggaggaaagacgtcacgagcgccgtgatcgacagc
gacaggtgtgaggaggccatcacaatgtttaaagtgaattcagccaaacgctgcgctgtg
ctggacatgatcgagtttctccccgagtgttgcaagcatctcttagacagctgcattaaa
gagtcagaggaagacgtgaactcctgcggctactatctggagtataatttccagtggctt
cagcagccgatacagtacactaaggacatggaaaaatcggagaaagaagacgaaaacaaa
cccctggctgccctcaacgccatggtggagtttaatcgtgtcgagttgctgactcatccg
gtgtgcaagaaatatctggaaatgaaatggcatgcgtacggtgtgaaagctcacttgctc
aacatgaccatgtacacactgggagttttccccctgacctacctgatcgtccacctgcgg
cccgaactgaaagtggagaaaaacgtgacgaccgtcaacatggtcacgaaacgtctcgac
gagcagtgttatttcatcacaacctgcatgtttctggtcctggcgatgaatttatacgca
gtcggtaaagaagtagtgcagatgttccagcagaggttcaagtacctgcaggacgcgtcg
aacgtgatggactggggctcgaccatctgctctctgctcttcgtcattcctctcctgctg
aacgtgaagaaatcgtggcattggcaggccggagctctggcgtctctcggctcctgggtc
aacctgctcctctacctgcagaggttccagaggttcgggatatacgtggtgatgtttcgg
gagatctgcaagacgctgctgagcatcattctgatattcgtctatctgatcctggcgttc
gcgctggccttctacgctctgatgatcgaacagaaacattttggccgtatgtttctgtcg
ctgatgcagacgtttgccatgatggcaggagagatcaactaccaggacaacttcatgaaa
ccctacatggccagacaccttcccttccccgtgctgacgtacttcatcttcatttggttc
gtcctgcttgtgccgattctgctcatgaacctgctaattggtttggctgtgggagacatc
gcggaggtgaagaacaacgcctgtttaaaacagataggaatgcagattgaacttcacact
aatctggaggagcgcctgccttcctggttcgtgaaaaaagtcgaccaaatctccgtcaag
gaattccctaacaagtgctacaaaggaaaaaggtggttcttctgtggaggtgaagtgaac
aaagtgagggcacgtctgagttccagcacacggcagtgcacacagctggagagagaactc
accaaacagaaacacagactgaaggacctctccgagtccatggagaagcagcacaacctg
ctgaagctgatcgtgcagaagatggagatcagctccgaggcggaggaaaatgacggccct
cgcgtcctgcgtgacttcacgcacaaactcagcgccaggagcaagtgggggccgctactg
cgcgccgttacagccaagaggaagtga
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