Ipomoea nil (Japanese morning glory): 109149162
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Entry
109149162 CDS
T04663
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109149162
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ini01009
]
109149162
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ini03019
]
109149162
03036 Chromosome and associated proteins [BR:
ini03036
]
109149162
Protein phosphatases and associated proteins [BR:
ini01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
109149162
Messenger RNA biogenesis [BR:
ini03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
109149162
Chromosome and associated proteins [BR:
ini03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
109149162
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B56
DUF6698
TetR_C_16
Motif
Other DBs
NCBI-GeneID:
109149162
NCBI-ProteinID:
XP_019152370
LinkDB
All DBs
Position
Un
AA seq
531 aa
AA seq
DB search
MESVLQENENVKTNLTYICILQSYLSLDRRETCSVGPPSLAFSGAHGSPLQSTVIVSVQG
GRFRVKMLNKIMKRGHKKVPKPDAEDFGSVSASVVVVNHASRGSSLGNSTPAPAPGTFEV
LPLFRDVPVSQRQNLFSRKLQICCFQFDFTDVVKMVREKEMKRQCLLELVDFIQSGSGKI
TESNQEEMVKMISVNIFRCLPPASHENSGSENVDGEDDPYLEPSWPHLQIVYELLLRYVL
SSDTDTKVAKQFIEHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAMSN
IFYQFIYETEKHSGIGELLEVLGSIINGFALPMKEEHKLFLVRALIPLHKPKTNAVYHQQ
LSYCIVQFMEKDYKLADAVIRGLLKYWPVTNCRKEVLFLGELEEVLEATQVSEFQRCMVP
LFRQIARCLNSSHSQVAERALFLWNNDHIVSLIAQNRNVILPIIFEAMEKNIQSHWNQAI
QGLTGNVQKIFLEMDSDLFHECQRQYAESAACATEQEEQRELRWQRLVACS
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggtcctccaagaaaatgaaaatgtcaaaacaaatctgacttatatatgtatt
ctgcaatcgtatctctcacttgatcgacgggaaacttgctccgtcggaccgccgtctctt
gccttttccggcgctcatggttcgccgctgcagtccacggttatagtttcagtacagggg
ggtaggtttagagttaagatgttgaacaaaattatgaagagagggcacaagaaggtgccc
aaaccggacgccgaagactttgggtcggtctccgcgtccgttgtggtggtgaatcatgct
tcaaggggtagttcgctgggaaattcaacaccggcgccggcgccggggacattcgaggtc
ctgccgttgttccgggatgtgccggtgtcacagcggcagaacttgttttccaggaagctt
cagatttgctgtttccagttcgatttcacggatgtggtgaagatggttagggagaaggag
atgaagaggcagtgccttctagagcttgtagattttattcaatctggctctgggaagatc
actgagagcaatcaggaggaaatggtaaagatgatatctgttaatatattcaggtgtttg
cctccggcttcacacgagaacagtgggtcggaaaatgttgacggggaggatgatccctat
cttgagccctcatggccacacttacagattgtatatgagctgctattgcgatatgtgctt
tcatctgatactgatacgaaagttgcaaagcagttcattgagcattcgttcgtgttgaag
ttattggatttattcgactccgaagacccgagggagagagagtatttgaaaacaattctt
catcgcatatatgggaagttcatggtgcatcgtccatttattaggaaggcaatgagtaac
atcttttatcagtttatatatgagacagagaagcatagtggtataggtgagctcttggag
gttctagggagcataataaatggatttgcgttgccgatgaaagaggagcataagctgttt
cttgtccgtgcactcataccgctccacaagccaaaaacaaatgcagtgtatcatcagcag
ttgtcgtactgtattgtccagttcatggagaaggactacaagctggcagatgctgttata
agaggtttgttgaaatactggcctgtcacaaattgccgaaaagaggttctgtttcttggg
gaacttgaagaagttctggaggctacgcaggtgtcagagtttcagcgatgcatggttccc
ctttttagacagatagctcgctgccttaacagttcacattcccaggttgcagagcgcgcc
ctattcttgtggaataacgatcatatagtaagcctgattgcacagaaccggaatgtcata
ttgccaatcatctttgaggccatggaaaagaacatacaatctcattggaaccaagcgatc
caagggctgactggtaacgttcagaaaatctttctggaaatggattccgacttattccac
gagtgccaaagacagtatgcagaaagtgcagcttgcgcgacagaacaggaagagcagcga
gaattaagatggcagagattagtagcctgcagctaa
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