Ipomoea nil (Japanese morning glory): 109179105
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Entry
109179105 CDS
T04663
Name
(RefSeq) PHD finger protein At1g33420
KO
K26271
PHD finger protein MS1/MMD1
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ini03000
]
109179105
Transcription factors [BR:
ini03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
109179105
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Ortholog
Paralog
GFIT
Motif
Pfam:
PHD
PHD_5
PHD_2
zf-CSL
ASH2L-like_WH
Motif
Other DBs
NCBI-GeneID:
109179105
NCBI-ProteinID:
XP_019184216
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All DBs
Position
Un
AA seq
713 aa
AA seq
DB search
MVVSGRPMKRMKRRVTADLYDFLTFPSPSDGVSSHAGSGAGPFRTNVRAFLSMHALLPPP
SSLFPHLLTWQILFRVGDLTESGGDSSPAVVYLDIVEEDVARSRSVYCDHCRVVGWSNNP
VCAKRYHFIIKADGNSIGGYNKSCAGCGDPLHLSESRCKSCNHMVTTEDVEDWMYHQLED
TSHLLHGVIHANGYGHLLRVNGREGGSRVLSGCHIMNFWDRLCKVLGVRKVSVMDVSKKY
GLEFRLIHAITKGHPWYGEWGYEFGTGSFGLTHDAYKRAVQNLSSLPLTILLSQGRKPRT
RMQDLISFYQSLSERELVNIRDLFSFLISLIHDTHKSSLRVDDLTCKKRKYCDTKALCAW
SSSDVLRVEEAMFRVLRAVSGSKWVSWRALRGAVCKAGSPELLDYCLKELTGKQAADGMV
VNSRCASGSGAMEYRLEPGSATVNVNTAGDNNYMRPNLPSDEHLLRDLKYLYECMLHPQT
MANHLHVCKKDVIIQSATTLIDCKKFMKEYQPEKFVPALNPRAIQLLCELDLTDYSERCS
VNPPPELLVLSSNATISDLKVEASRAFQDVYLMFRRFQVEELVGYAGVGDSTGLKLLLGS
AEFVRVRGRSLGKNALSRFRMERGLESWTVDCHCGAKDDDGERMLACDSCGIWQHTRCAG
IPDLDSVPARFVCLRCSCVIGQAKTIGQMKDEFVGSAAYCVGKGLGKSMTSAF
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggtggttagcggtaggccgatgaagcggatgaagaggagagtcacggctgacctgtac
gacttccttacgttcccttcgccgtccgacggtgtttcttctcacgccggctcgggcgcg
gggccctttaggacgaacgtgagggccttcctgtccatgcacgcgctcttgccgcctccg
tcgtcgcttttcccccatctgctgacgtggcagatcctcttccgtgtgggagacctcacc
gagagcggtggcgactcctctcccgccgtcgtctacctagacatcgtggaagaggacgtt
gcgagatctagatccgtttattgcgaccactgccgagtcgttggttggagcaataatccg
gtgtgtgccaagcggtaccatttcataattaaggcggacgggaattccattggtgggtat
aacaagtcttgtgctggctgtggtgatccacttcatttgtcggaatcaagatgcaagtcg
tgcaaccatatggtaaccacggaagatgtggaagattggatgtatcaccaattggaggat
acaagccatcttcttcacggtgtgattcatgccaatggttacgggcatcttctcagggtc
aatggcagggaaggtggctcaagggtgctttctggttgtcatatcatgaacttctgggat
cggctttgcaaagttcttggagtaagaaaagtaagtgtgatggatgtgtccaagaaatat
gggctggagtttagactgattcatgccataacgaaagggcacccatggtatggcgaatgg
ggttatgaatttgggactggtagttttggtctgactcatgatgcctataaaagagctgtt
cagaacctttcttctctgcccttaactattcttttatctcaaggccggaaacctcgaaca
cgcatgcaggatttgatttccttttatcagtccttgtcggaacgtgaacttgtaaatatt
agggacctcttcagttttttaattagtttaatccatgatacccacaaatctagcttgagg
gttgatgatttgacttgcaagaagcgtaaatattgtgacaccaaggccttatgtgcatgg
agtagtagtgatgttctacgtgttgaagaagctatgttcagagtgcttagagctgtttct
ggatccaaatgggttagctggcgtgctctgagaggtgctgtatgcaaagctgggtcccct
gaacttcttgactactgcctaaaagaactaactggaaaacaggctgctgatggaatggtt
gtcaactcccgttgtgcttctggttctggtgccatggagtacagacttgagcctgggagt
gccacagtcaatgttaatacggctggggataacaactatatgagaccgaatttaccttct
gatgaacatctattgcgggatctgaagtacttgtatgagtgcatgctccaccctcaaact
atggcgaaccatttacatgtctgcaaaaaggatgttataatccagtcagctacaacactt
attgattgcaagaaattcatgaaagaatatcaacccgagaaatttgtaccagccttaaac
cctcgtgccattcagctgttatgtgagctggatctaacggattattctgaaaggtgttct
gtgaatcctcccccagagctacttgttttatcttcaaatgccaccatatctgacctgaag
gttgaagcatcaagagctttccaagatgtatacctaatgttcaggagattccaagtggag
gagttagttgggtatgccggtgtcggtgactctactggcttaaaattattgttaggatca
gctgaatttgtgagggttcggggaagaagcctgggtaagaatgctctgagtaggtttaga
atggaaagaggtctcgagagttggactgtggattgccattgcggggccaaggatgatgac
ggtgagagaatgctggcatgtgattcctgtggcatatggcagcacaccaggtgtgctgga
attcccgacttagatagtgttcctgctcggtttgtttgcctcaggtgcagttgtgttatt
gggcaagctaagactattggacagatgaaggatgagtttgtgggatctgctgcctattgt
gttggcaagggactagggaagagcatgacaagcgctttttga
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