Ictalurus punctatus (channel catfish): 108254874
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Entry
108254874 CDS
T04658
Name
(RefSeq) F-box only protein 42
KO
K10317
F-box protein 42
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108254874
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
108254874
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_4
Kelch_1
Kelch_5
Kelch_6
Kelch_2
F-box-like
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
108254874
NCBI-ProteinID:
XP_017305760
Ensembl:
ENSIPUG00000017866
UniProt:
A0A2D0PL23
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All DBs
Position
21:complement(20778650..20784579)
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AA seq
665 aa
AA seq
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MSRSSDGEDAGFVAMDTEDAGTASPGGHVNNQTAATKTETTGCVKHPEKSCQRAMGELPE
EVLEYILSFLSPYQEHKTAALVCKQWYRLIKGVAYQCYHGFLRAVQEGNIQWESRTYPYP
GTPITQRFSHSACYYDSNQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLASGSYPS
PKAGATLVMFKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPM
AGHSSSVINNTMVVFGGSLGARQMSNEVWVLDLEQWSWSKPTITGSAPHPRGGQSQIVID
GETLLILGGCGGPNALLKDAWLLHMGAPTWSWQQLRVENEEHCAPELWCHPACKVGECVV
VFSQAPSGRAPLSPSLNSRPSPISATPPPLGPDTPPLRSQSPVRSGVVLGNVEEAPCVNG
RWGTLRPRPATVRGGARDGSPSSSQQPSPSQAPDSPPLLNGSSPSPHTSPSHPHGHAHLP
TDYGWESPPSSASSVAPPSLDQPSTNGIHTPPGAVSPAALRRGLEAVKSLASSSPSSSSS
NPAPSSSPASSSPPQVDGHSIPPIARRLGHSVPPQSLNVGKPLYQALSCKPMQMYVLDVS
RAKTAGVVAWRVFGSSAVTGPPETSLHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYF
VRAKR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgctcctccgacggcgaggacgccggcttcgttgccatggacacagaggacgcc
ggcaccgcttcgccggggggtcacgtcaacaaccagaccgctgcgaccaagacggagacg
acaggatgcgtgaagcatcctgagaaaagctgccagagagccatgggcgagctgccggag
gaggtgctggagtacatactgtccttcctctcgccatatcaggagcacaagaccgccgcc
ctggtgtgcaaacagtggtaccgcctcattaaaggtgtagcgtatcagtgttaccatggt
ttcctgagggccgttcaggaagggaacatccagtgggagagtcgcacctacccgtatccc
ggaacccccatcacacaacgcttttcccacagtgcgtgttactatgactcaaaccagtcg
atgtacgtgtttggcggctgcacacagagcagctgtaatgcagcgtttaacgacttgtgg
agactcgacctgaacagcaaggagtggatacgaccgctcgcttcaggctcgtacccatct
cccaaagccggcgccacgctggtgatgtttaaggatctgctggtgctgttcggaggctgg
acccgccccagcccgtaccctctgcaccaacccgagcgcttcttcgacgagatacacacc
tactctccttccaaaaactggtggaactgtatcgtgacgactcacggtcctccacccatg
gctggtcactcctcctctgtcattaataacacaatggtggtgttcggtggctctctcgga
gctcgacagatgagtaatgaggtgtgggttctggatcttgaacagtggtcctggtccaaa
cccaccatcactggctctgctcctcacccccgcggaggccagagtcagattgtgatagac
ggcgagacgctgctcatcctggggggctgcggcggcccgaacgctctgctgaaagacgcc
tggttgttgcacatgggtgcccccacctggtcatggcagcaattgcgagtagagaacgag
gaacactgcgctcctgaactctggtgccacccggcctgcaaggtgggtgagtgtgtggtc
gttttctcgcaggctccgtctggccgggctcctttgagcccgagtctgaactcccgccct
tcccccatcagtgccacaccccctccgctcggcccggacaccccccctctgcgatcacag
tctcctgtgcgctccggcgtcgtccttggcaacgtggaggaggctccatgcgtcaacgga
cgctggggaactctccggccacgcccggcgacggttaggggcggagccagagacggaagt
ccctcctcttcacagcagccgtctccatcgcaggctccagacagtccgcctttgcttaac
ggctcttccccttcccctcatactagtccctcccacccacatggccacgcccatttacca
acagattatggatgggagtctccgccctcttcggcatcatcagtggccccaccttctctg
gatcagccaagcacaaatggcattcacactccgccaggcgctgtttctcctgccgcgctc
cgcagaggcctggaagccgttaaatccctcgcatcgtcgtctccttcctcgtcctcctct
aaccccgcccctagctccagccccgcctcatcaagcccgccgcaggttgatggacactcg
atccctccgattgcgcgtcgcctgggccactcggtgcccccgcagagcctgaacgtgggg
aagccgctgtaccaggcgctcagctgcaagcccatgcagatgtacgtgctggacgtttca
cgggccaaaaccgccggtgtcgtggcgtggcgcgtctttggcagcagtgccgtcactgga
ccgccggagacgagcctgcacacggtggtgcagggcagaggagaactcatcatcttcggc
gggctcatggacaaaaaacagaacgtcaagtactaccccaaaaccaatgccttgtatttc
gtacgtgctaaaaggtaa
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