Ictalurus punctatus (channel catfish): 108255667
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Entry
108255667 CDS
T04658
Symbol
nr2f1a
Name
(RefSeq) nuclear receptor subfamily 2 group F member 1-A
KO
K08547
COUP transcription factor 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108255667 (nr2f1a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ipu03310
]
108255667 (nr2f1a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
108255667 (nr2f1a)
Nuclear receptors [BR:
ipu03310
]
2. Hepatocyte nuclear factor 4 like
2F. COUP-TF like receptor
108255667 (nr2f1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
XS
Motif
Other DBs
NCBI-GeneID:
108255667
NCBI-ProteinID:
XP_017307276
Ensembl:
ENSIPUG00000017934
UniProt:
W5USF1
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All DBs
Position
22:complement(7776127..7783659)
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AA seq
411 aa
AA seq
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MAMVVSVWRDPQEDVAGGAASGPNPAAQPAREQQQAASAAPHTPQTPSQPGAPSTPGTAG
DKSSQNSGQSQQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRNCPI
DQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPTQPNPGQYALTNGDPLNGHCYLSGYIS
LLLRAEPYPTSRYGSQCMQPNNIMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVS
LLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLK
ALHVDSAEYSCIKAIVLFTSDACGLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKL
LLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDMLLSGSSFNWPYMSIQ
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggtagttagcgtctggcgcgatccgcaggaagacgtggccggaggagcggcg
agcggcccgaaccccgcagcgcagccggcgagggagcagcagcaggcggcgtcagcggca
ccgcacaccccgcagacacccagccagccgggagcgccgtccaccccaggcacggccgga
gacaagagcagccagaactcaggccagagccagcagcacatcgagtgcgtggtttgcgga
gacaaatcgagcggcaagcactatggccagttcacctgcgagggatgcaaaagtttcttc
aagcggagtgtccggaggaacttaacgtatacgtgccgtgccaacaggaactgtcctatt
gaccagcaccatcgcaatcagtgccaatactgtcggctcaagaagtgcttaaaagtgggc
atgcggcgggaagcggttcagcgaggaaggatgcctccaacccagccgaacccaggccag
tacgcgctcaccaacggggaccctctgaacggccactgttacctctccggatacatctcg
ctactgctgcgtgccgagccttaccccacgtcccggtacggcagccagtgcatgcagccc
aataatatcatggggatcgagaacatctgcgagttggcggctcgcctcctcttcagtgcc
gtggaatgggcgaggaacatccctttctttcccgacctgcagatcaccgaccaggtgtca
cttctcagactcacatggagcgagttgttcgtgctaaacgcggcgcagtgctccatgccg
ctacacgtggcgccgttgctcgccgccgccggcctgcacgcgtcgcccatgtccgccgac
cgcgtcgtggccttcatggatcacattcgcatcttccaggagcaggtcgagaagctcaag
gccctgcacgtcgactcggccgagtatagctgcatcaaagccatcgtgctcttcacgtca
gacgcttgcggcctgtcggatgcggcccacattgagagtctgcaggagaagtctcagtgc
gctctggaggagtatgtgaggagccagtacccgaaccagccgagtcgcttcggcaagctg
ctcctgcgacttccctcactgcgtaccgtatcttcatccgtcatcgagcagctgttcttc
gttcgcttggtaggtaaaactccaattgaaaccctcatcagggatatgttgctatccggg
agcagcttcaactggccctacatgtccattcaatga
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