Ictalurus punctatus (channel catfish): 108256059
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Entry
108256059 CDS
T04658
Symbol
sv2ca
Name
(RefSeq) synaptic vesicle glycoprotein 2Ca
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108256059 (sv2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108256059 (sv2ca)
Transporters [BR:
ipu02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
108256059 (sv2ca)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
Pentapeptide_4
Pentapeptide_3
Motif
Other DBs
NCBI-GeneID:
108256059
NCBI-ProteinID:
XP_017308044
Ensembl:
ENSIPUG00000013042
UniProt:
A0A2D0PPV4
LinkDB
All DBs
Position
22:complement(11453085..11489831)
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AA seq
730 aa
AA seq
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MDDTDPQDHLSLMKGAKDMVREAKRQAAKKVNTVVDRASEEYSNSRAYHRFQDENDGEYY
DPPQGNYTGDQTNDEEGSSDATEGHDEEDEIYEGEYQGIPSESGHRDGHVALGQTIADGL
KDRRELESERQADEEELAQQYELIIQECGHGRFQWQLYFTLGLALMSDGVEVFIVGFVLP
SAETYMCTPDSSAGWLGSIIYVGMMVGAFFWGGMADKVGRRQCLLICMSMNGFFAFLSSF
VQGYGLFLLCRMIAGFGIGGTVPIVFSYYAEVLAREKRGEHLSWLCMFWMIGEIYASAMA
WAIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVCSVVALTFMPESPRFYLEVGKHDEAW
MILKQIHDTNMRARGQPEKVFTVNRIKIPKQIDEFVEMHPETSNFVSKVIFRVKTELYGI
WLNFMKCFNYPVRDNSIKLAIVWFTLSFGYYGLSVWFPDVIKHLQADEYASKVQWHTNEQ
TEDFTFNFTLENQVHTNGVFIKDSFISMKFKSVTFINTTFQSCLFEDVTSVGSFFRNCTI
TDSYFYNTDIDDSKLINTKVTNSTFLHNKTGCQMTFDHDYSAYWVYFVNFLGTLAVLPGN
IVSALLMDKTGRLSMLGFSMILSGISCFFLWFGTSEAMMIGMLCLYNGLSISAWNSLDVV
TVELFPTDRRGTGFGFCNALCKLAAVLGNLIFGSLVSITKAIPILLASSVLVCGGLVGLR
LPDTRSNVLM
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggatgacacagacccccaggaccacctttcccttatgaagggggctaaagatatggtg
agggaggccaaacggcaagccgccaagaaggtcaacacggtggttgaccgagcatcagag
gagtactcaaacagccgtgcctatcaccgcttccaggacgaaaatgacggtgaatactat
gacccgcctcagggcaactacacaggtgatcaaaccaatgatgaagaaggttccagtgat
gccaccgaaggtcatgatgaagaggatgagatatatgagggtgaataccaaggaattccc
tctgaatctgggcacagggatggacatgtggctttggggcagactatagcagatggcctt
aaagaccgtagagagcttgaaagtgagaggcaagcagatgaggaggagctggcacagcag
tatgagctgatcatccaggagtgcggccacggcaggttccagtggcagctgtacttcaca
cttgggttagcgctcatgtctgatggtgtggaggttttcatagttggctttgtgctgccc
agtgctgaaacatatatgtgcacgcctgattcaagcgctggatggctaggtagcattata
tacgtggggatgatggtgggggctttcttctggggtggcatggctgataaagtgggccgg
cggcagtgtctgcttatctgcatgtccatgaacggtttctttgccttcctgtcttccttc
gtacaaggctatggcctcttcctactctgtcgtatgatagcaggatttgggattggtggg
acggtacctattgtgttttcttactatgccgaagtcttagcaagggagaaacgtggtgag
catctgagctggctctgcatgttttggatgattggggaaatctacgcttctgccatggcc
tgggctatcatacctcattatggatggagcttcagcatgggttcggcatatcagttccac
agctggagggtatttgtagtggtgtgtgctctgccatgtgtctgttctgtggtggctctc
accttcatgccagaaagtccaagattctatctagaggtggggaagcacgatgaggcctgg
atgatcctcaagcagatccacgacaccaacatgagagcacgcggacaaccggaaaaagtc
ttcactgtaaatagaattaaaatcccaaaacagattgacgagtttgtggaaatgcaccca
gagaccagtaactttgtgtccaaagttattttccgagtgaagacagaactttatgggatt
tggttaaacttcatgaagtgtttcaattatccagtgagagataattctataaagctggcc
attgtgtggtttacactgtcattcggatactatggcttgtctgtgtggttccctgatgtg
atcaagcaccttcaggcagatgaatatgcttctaaagtgcagtggcatactaatgagcaa
actgaggacttcacattcaacttcacattagagaaccaggtacacaccaatggtgtgttc
atcaaggacagtttcataagtatgaagttcaagtcagtgactttcatcaacaccacgttt
caaagctgtctctttgaagatgtgacgtctgtgggatcgttcttccgaaactgcactatt
acggacagttatttctataatacagatattgatgattccaaactcataaacacaaaagtc
acaaacagcacatttcttcacaacaaaaccggttgtcagatgacgtttgatcatgactac
agcgcctactgggtctactttgtcaactttctggggacgctggctgtgctaccaggaaac
attgtgtctgcactgctcatggataaaacaggacgcttatccatgctgggattctccatg
atcctttctgggattagctgcttctttctgtggtttggcaccagtgaggccatgatgatt
ggaatgctgtgtctttacaatggcctcagtatctctgcctggaactcactggacgtggtc
acagtagagctatttcctactgacaggagagggactggcttcggcttctgtaacgccttg
tgtaagctggcagcagtgctggggaacctgatctttggctctctggtcagtattactaaa
gccatcccaatcctgctggcatcctccgtgctggtgtgtggtggtctggtgggactgcgg
ctcccggacacaaggtccaacgtcctgatgtag
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