Ictalurus punctatus (channel catfish): 108256229
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Entry
108256229 CDS
T04658
Name
(RefSeq) POU domain, class 6, transcription factor 2
KO
K09368
POU domain transcription factor, class 6
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108256229
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
108256229
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
TAF4
HOCHOB
CENP-N
FtsX_ECD
Cox20
HL_N-beta
Saf4_Yju2
Motif
Other DBs
NCBI-GeneID:
108256229
NCBI-ProteinID:
XP_017308344
Ensembl:
ENSIPUG00000004301
UniProt:
A0A2D0PQQ3
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All DBs
Position
23:complement(1078754..1147983)
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AA seq
595 aa
AA seq
DB search
MSGVMSGGAPGLNQPILIPFNAGGHLGGQQGLVLSLPTAANIQGLVAAAAAGGIMTLPLQ
NLQATSSLNSQLQHLQHLQQIQQHHQQQQQQREREHREREQQREREQQREREREREQQRE
REREREQHCGSAHLQSLSQLPPHHPLTPPIKLQATGPSTGTASSCTSSSLGSVQPSQSPP
SHKQNQSPAHSLPSPVTPPLPLQLNPLASQAAVAAATMGSIAGSQMFGNGALPNLQGVTG
QLVTNAQGQIIGTIPLMPNSAGPSNQTGGGTSSLQVQPITPQLLTNAQGQIIATVIGNQI
LPVINTQGITLSPIKTGQQLSQAAQAQPPPPVSQPGLLRMPHSQSPLRQASSSSSTSSSS
SSALSVGQLVSNPQTAPSEVDGVNLEEIREFAKAFKIRRLSLGLTQTQVGQALSATEGPA
YSQSAICRHTILRSHFFLPQEAQESTIASSLTGKLNPGLLYPARFEKLDITPKSAQKIKP
VLERWMAEAEARHRSGMQNLTEFIGSEPSKKRKRRTSFTPQALEILNSHFEKNTHPSGQE
MTEIAEKLNYDREVVRVWFCNKRQALKNTIKRLKQPELGAVAPMDHLADPLEEHP
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgtgatgtcaggaggtgcgcctggtctgaaccagccaatccttatccccttt
aatgcaggtggtcacctggggggacagcagggcctggtcttgtctctacctacagcagcc
aatatccagggactggtggctgccgcagccgccgggggcatcatgactctccctctacag
aacctgcaagctacctcatctctcaactcccaactccagcatcttcagcatctccaacaa
atacaacagcaccaccagcaacaacagcagcagcgagaacgggaacaccgggagcgagag
cagcagcgagagcgagagcagcagcgcgagcgagagcgagagcgtgagcagcagagagag
cgggaacgtgaacgagagcaacattgtgggtcagcacacctccagtctctcagtcagctg
ccaccccatcatccactgactcctccaatcaagttacaagccactggtccttcgacaggc
accgcctcctcctgtacctcgtccagtcttggttcagttcagccttcacaatctccacct
tctcataagcagaaccaatcaccagcacacagcctaccctcaccagtcacacctcctctg
ccactgcagctcaatccactagccagccaggcagcagtagcagcagcaaccatgggttct
attgctggatcacaaatgtttgggaatggtgctctgccgaacctgcaaggcgttacaggc
caactggtcaccaatgcacagggacagataattggtacaatcccactgatgccaaactct
gcaggaccttccaaccaaacagggggtggaacttcatctctccaggtccagccgatcacg
ccgcaacttctgaccaatgcacaaggccagatcatcgctacagtgattggaaaccagatc
ctgcctgtcatcaacacacagggaatcacactatcaccaatcaaaactggacagcagctg
tcccaggctgcccaggcccagccgcctcctcccgtgtctcagccaggcctgctgcgaatg
ccccacagccagagtcctctccgccaagcatcttcatcctcctcgacatcttcatcctca
tcttcagcactcagcgtggggcagctggttagcaaccctcaaactgctccaagtgaagtg
gatggtgtgaatctggaggagatccgagaatttgccaaagcatttaaaatccgtcgtctg
tctctgggtctgacgcaaactcaggtgggccaagctctcagcgccacggaggggcctgcc
tacagccaatccgccatctgcagacacaccatcctgagaagccactttttcctaccacag
gaagcccaagagagcactatagctagcagtctgacaggcaaactgaaccctggcctttta
tatcctgccaggtttgagaagttggacatcacgccaaaaagcgcccagaagattaagcct
gtgctggagcgctggatggctgaggcagaagcccgccatcgctcgggcatgcagaacctg
accgagtttatcggcagtgagccatcgaaaaagcgcaagcgccggacctctttcacgcca
caggccctggagatccttaacagccacttcgagaagaacacacacccttcgggccaggaa
atgaccgagattgctgagaaactgaactacgaccgtgaggtggtgcgtgtctggttctgc
aataaaaggcaggcgcttaaaaacacaataaagaggctgaaacagccagagcttggggct
gtcgcacctatggaccatctggctgaccctttggaagaacatccatag
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