Ictalurus punctatus (channel catfish): 108256553
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Entry
108256553 CDS
T04658
Name
(RefSeq) DNA-binding protein SATB1 isoform X1
KO
K23225
DNA-binding protein SATB1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108256553
03036 Chromosome and associated proteins [BR:
ipu03036
]
108256553
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
108256553
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108256553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ULD
CUTL
CUT
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108256553
NCBI-ProteinID:
XP_017309030
Ensembl:
ENSIPUG00000023428
UniProt:
A0A2D0PSN9
LinkDB
All DBs
Position
23:17570040..17626880
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AA seq
892 aa
AA seq
DB search
MMDHLSEACLGKENCELVGGLNDSKGPPAKIARLEQNGSPQGRSRLGSTGAKLSGVAFKP
SPHLLKTSHKRGNMLPVFCVVEHYESPIDFDSREEHAEFVLVRKDMLFNQLIEMALLSLG
YSHSSAAQAKGMIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVITLKIQLHSHPESLSL
FLSLPPSVSPCSCPKLEDLPPEQWTHSTVRNALKELLKDMNQSSLAKECPLSQEREKREA
GERTTVCSCYNSMISSIVNSTYYANVSAAKCQEFGRWYKHFKKTKDMMVVRQPSQLEGYL
GTCVLHDSPRATAVAEMDGLSELSPPGTNHLSFSQQPIPGSTAEQPPSPVPLTHSGQAPG
RAQLPGLHPGLVSSPISPQLVNQQIVMAQILNQQYAVNRLLAQQSLNQQYLNHPPVSRAL
SKPLDTQVSSNTEVSSEIYQWVRDELKRAGISQAVFARVAFNRTQGLLSEILRKEEDPKT
ASQSLLVNLRAMQNFLQLPEAERDRIYQEERERSLTAASSMGPAPLISTPPSRPVQSVGV
NQMLLSSSDPRISCYSDSPRREECNNIRPEDWNPRIPVGISPASRLPAQVKPLPLASEWN
GKQESSVLNISSSIYDEIQQEMKRAKVSQAMFAKVAASKSQGWLCELLRWKEDPSPENRT
LWENLSMIRRFLSLSQSERDAIYEQESNGGQQHHTERPTHLLHMPTEPLQPQAHPPPSAQ
LQPALALPYPSQPLISQQPQPQQQTGPRLPPRQPSTAAPAEAEDESRQAKGRTGARISLE
ALGILQSFVQDVGPYPDDEAVHTLSAQLDLPRHTIIKFFQNQRFCVRPKEVASGIALPAA
NEQDEVSMTDFKEGELLKELDESTQTTSIFTIKIEEHAGAEGQCQAEQEVKE
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgatggaccatctcagcgaggcgtgcctggggaaggagaactgcgagctggtgggtggc
ttgaacgactccaagggccccccagccaagatcgcgcggctggaacagaacggcagccct
cagggacgttcacgcctgggcagcaccggcgccaaactctccggagtggccttcaaaccc
tccccgcacctgctgaagacctcacacaagaggggtaacatgctgcccgtgttctgcgtg
gtcgagcactatgagagcccgatagacttcgacagcagggaagagcacgccgaattcgtg
ctggtcagaaaggacatgctcttcaaccagctgatcgagatggcgctcctctcgctgggc
tactctcacagctctgccgctcaggctaaaggtatgattcaggtgggcaagtggaacccc
gttcccctgtcgtacgtgaccgacgcccccgacgccaccgtagccgacatgctacaggac
gtctaccacgtcatcacgctgaaaatccagctgcacagccaccctgaatcactctctctc
tttctctctctacctccatctgtctctccatgcagttgtcctaaactggaagacttgcct
cccgagcagtggacccactcgacggtgcgaaacgccctcaaggagttactcaaagacatg
aaccagagctctctggctaaagaatgtcccttatcacaggagagagaaaaaagagaggct
ggtgagagaacgactgtttgtagctgctataacagcatgatatcctccatcgtgaacagc
acttactatgcaaatgtctctgcggcgaagtgtcaggaatttggacgttggtataaacat
ttcaagaagacaaaagacatgatggtcgtgcgccaaccctcccagctggagggctacctg
gggacgtgcgtcctccacgacagcccacgtgccaccgcagtagccgaaatggatggcttg
tcagagctctcgccgcccggcaccaaccacctgagcttcagtcagcagcccatcccggga
agcacggccgagcagccgccgtccccggtgcccctgactcacagcggtcaagccccaggc
cgcgcccagcttccaggtcttcaccccggccttgtgtccagccccatcagtcctcagctg
gtcaaccaacagattgtcatggcgcagatcctaaaccagcagtacgccgtgaaccggctc
ctggcgcagcagtccctgaaccagcagtacctgaaccacccgccggtcagccgggctctc
agcaagcccctggatacgcaggtgtcttccaacacagaagtgtcctccgagatctaccag
tgggtgagggacgagttgaagagagccgggatctcgcaggccgtgttcgcccgcgtcgcg
ttcaacaggactcagggattgctttcggagatcctgagaaaagaggaagaccctaaaacg
gcgtctcagtccctgctggtgaacctgagggccatgcagaacttcctgcagctacccgag
gccgagagagaccgtatttaccaggaggagagggagaggagtttaacggcggcgtcctct
atgggccctgcgccgcttattagcactcctccatcacgccctgtccagagtgtaggagtg
aaccagatgctgctttccagttcagatcccagaatcagctgctactccgactcgcccaga
agagaagaatgtaacaacattagaccagaggactggaaccccaggattccagttgggata
tctcctgcgtctcggctccccgctcaggtgaagcccctgccgttggcgtccgagtggaac
ggcaagcaggagagctccgtcctgaacatcagctcgtccatctacgacgagatccagcag
gagatgaagagggccaaagtgtcacaggctatgttcgccaaggtcgccgcttccaagagc
cagggttggctgtgtgagctgctgcgctggaaggaggacccatccccggagaaccgaacg
ctgtgggagaacctgtccatgatccggcgctttctgagtctctcgcagtcggagagagac
gccatctacgagcaggagagcaacggagggcagcaacaccacaccgagagacccacacac
ctgctgcacatgcccaccgagccgctgcagccccaggcccaccctccaccttcagcccaa
ctccagcctgccctggcgctgccctacccgtcacagccgctcatttcccagcagcctcag
cctcagcagcaaacaggaccccgcctcccgcctcgccagccgtccaccgccgcgcccgcc
gaggccgaggacgagtcgcgtcaggctaaaggtcgcaccggcgcccgtatctccttggag
gcgctgggaatcctgcagagcttcgtacaggacgtagggccgtacccggacgacgaggcc
gtgcacacgctctcggcccagctcgacctgccccggcatacaatcatcaagttcttccag
aaccagcgcttctgcgtgcggcccaaggaggtggcgtcgggaatcgccctacctgcagcc
aacgagcaggacgaggtgagcatgacggacttcaaagaaggcgagctgctcaaagagctg
gacgagagcacgcagactactagcatcttcaccatcaagatcgaggagcacgcgggagcc
gagggacagtgtcaggccgagcaggaagtgaaagaataa
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