Ictalurus punctatus (channel catfish): 108256671
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Entry
108256671 CDS
T04658
Name
(RefSeq) CASP8-associated protein 2
KO
K25593
CASP8-associated protein 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108256671
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
108256671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding_7
Myb_DNA-binding
CRM1_C
Motif
Other DBs
NCBI-GeneID:
108256671
NCBI-ProteinID:
XP_017309257
Ensembl:
ENSIPUG00000010358
UniProt:
W5U8I7
LinkDB
All DBs
Position
2:complement(4137524..4147209)
Genome browser
AA seq
1894 aa
AA seq
DB search
METSTVDELYGDLAQGHHDSVLHYDEDSVDIYSGLEDSPKKNTNKGKDGAFLSPTRAKES
MDLYEELITEEREEKDATYNELKSKFVAAQNQVQDLLAKLQQMQTKNSSLHQENTLLKKN
ICALIKTAKMEIVRKDEEISKLSKRSSWGSFHPSVKERGQDAYNRSLARLNSPAGPIRES
QDLKRDKGVAEVSQGRPLNQPGGSSSADATPSSPSVLRSCTRSNLENPLTRQSKDSHGLD
SLPSTSVHDHIFVRGNRMSGSGERESTSTNSETRTRQNVCDETDSRKGAKQSGKESTSKE
KDVSKTDKNRSEREPRESAKSSCGSGNGQRQQQDNPVTLRRTDRSRSPSSRPQRASSHSS
TPDASRSNAQSRKEEFRHKQGQERQSGHTESSWRSEKDGSDKSHRKTEKRGTREHHRKEE
RRQEGMSSSERGRTRSDWIKEYEQRKSQSEERNRSDEKDCNRGERRGTRSESSKEHERQS
VKDLHTTRGVSNKADKTSVDDGKDRSRADVRENRRLASPVKPHHSAQNLRKDQDDKRRTS
GRSEGTSRSKASSGPDDSRGDTYMSSDRHSVKGRSDKDKRIGSPDKDLKNAPDNARIPKI
SEDGSVQADSLANASGKSPMGLTSSCNGSAVPEESSPKRKLTFMETLNLTVSPIKKQTNF
EQAKDPVPPSHEDTLVSNSTKDGSSFEPGEEFCVIDEVEDDSTDNSLALLTNTTTQPHDE
EPQTSLEVKGKELELHKRFDGDLSETLSGKMDGTASEMQEDESITKADFLNSVVCPTNLS
QKYVVEKIPEVPEVLLLPERAKPVDSPSVPLTDVRVKEQDSQAPVEKDKEKRRIGAKNPN
EEAQIDDKPEASVQNDTSQQEVATSVMATSTAKTCSNTDPSVSLEVVSSTVGMDNNHQSK
ETIAVSGMEITPGLENPDPCPDPLVEPSVETIDVNTTAREEGTPLEQASSSEPDSTENEM
EIFRPSRSLVVPHDEDSMMLTLSNIKVIPEAISPLTSPVRQIKKSQQQRLGKEPHVKCLS
KDLSTSATVADKDAVKMDMNKENKRPDSLVKPSVPKEQQEALSTTATEEDLEEGEIISES
DGEGALVIQSPPNEKRSSLRNQPSPRSPRLQKKSQTPPAVTPSRKEQEKNTASKDSPSSN
KRRFKTVTVPPRANISTSAEFMNMLLFIRSELRRKYMKLHKNVTKPAFSCIAEMSQASFT
EFVDSVNFSKFCSHGNEIKPLLNKIISSVMSKVSNNGIVNRIFEQRAEDLKQKLWNFVDG
QFDFLFKELKAGLKGVPDLSKNKPSLKRKQSNPRAEEDLNVDSCKLQSKEPLSTTENRPP
KKSKGEVEESEGQKVQEKMAYSDSLPCRGLGSSGKNIKATMEEGAKVPEVPTPNQSNQPQ
GVSSSEKSLQESIPAHENKASNHTRRLSHSGSIQDRADFEILTEQQTSSLTFNLVTDSQM
GDIFRCLLQGSDLLETGDNQNWPLNTPRKEGQAGESLVGIMTPSKMITPSKLITTWTSIS
PYKFQMPLNPALLDESCMLEVPSNALPNQSAPAVATSSSHQSFSILAEDLAVSLTIPSPL
KSDGHLSFLHPASGQPLTTPSNIISAHYSEDALLDEEDATVQDIHLSLESDNSSSPSSAS
GNWVATNSPVFQFKPNLPMQAEVMERSNDHFIVRIRHTSPGVQEEPKQEHRETLPSAEVL
SSRTSDQRLPLAGQPQVTSNQGSEAELSNKNTSDGVLAGGSPATLPKTTENQIEQANEHS
DTTGVTAATEPEHELNNACQRVSRKRKKHHSGPKSKRSRREKSQDNQEKQRHKKKSKSSK
DKNEKTPSKKIKTPSPQLSPNSLSAKNVIRKKGEVVVTWTREEDRDILVALKTQGASAKT
FAALSSKMGKSQAQIEERFTQLMKLFKKKEKMES
NT seq
5685 nt
NT seq
+upstream
nt +downstream
nt
atggagacgagcaccgtagatgagctttatggtgatcttgctcagggccatcatgattct
gtcctgcattatgatgaagactctgtggatatttattcaggacttgaggacagtcccaag
aaaaatacaaataaaggcaaggacggcgcttttctttcacctaccagggcgaaagagtcg
atggatttgtatgaggaactcatcaccgaagagcgagaggagaaagacgctacctataac
gagttgaaaagcaaattcgtggcggcacaaaaccaagtgcaggatttgctcgcgaagttg
cagcagatgcaaactaagaactcaagtttacaccaggagaacactctgctgaagaaaaac
atatgtgcacttatcaaaactgccaagatggagattgttaggaaggatgaggagataagc
aaattaagcaaaagatcgagttggggtagtttccatccgtctgtgaaggaaagaggacaa
gatgcctacaacaggagcttggcaaggttgaacagccccgctggtcctataagggagtct
caggatcttaaaagagacaagggagtagcggaggtgtctcagggaagaccgttaaatcag
cccggtggttcgtcctcagcggatgccacaccttcatcgccttcggtgctccgaagttgc
acaagaagcaaccttgagaaccctttaactcggcaaagtaaggatagtcatggtttagat
tcgctgcccagcaccagcgtacacgatcacatatttgtccggggtaatagaatgtctggt
agcggagaaagggaaagcacgagcacaaactctgagactagaactaggcagaatgtttgt
gatgaaacggatagcaggaagggagcgaaacagtctgggaaagagagcacctccaaagag
aaggacgtatcaaaaacggataaaaacaggtccgaaagagaaccgagagagtctgcaaaa
agcagttgtggatcaggaaacggtcagcggcaacagcaagacaatcccgtaacgctcagg
agaaccgaccgctcgaggagtccttcctctcgtccgcagcgcgcctcctcccactcatcc
acccccgatgcgtctagatcgaacgcgcagagcaggaaagaagaattccggcataagcaa
ggacaggaaaggcagagcggacatacggagtccagctggagaagcgaaaaggacggctcg
gacaagtcgcaccgaaagacagagaaaagggggacgagggagcatcacagaaaagaggag
cggaggcaagagggtatgagcagttccgaaaggggacgcaccagaagtgactggatcaag
gagtatgagcagaggaagtctcaaagtgaagaaagaaatcgatccgatgaaaaggattgc
aatagaggagaaagacgaggcacgaggtccgaatctagcaaagaacacgagcgacagagt
gttaaagatttgcataccacaaggggggtgagtaacaaagcagacaaaacgagcgtcgac
gacggaaaggaccgaagccgcgccgacgtacgcgaaaatagacgtctggcttcgcctgtt
aaacctcaccatagtgctcaaaatctgagaaaagatcaagatgacaaaaggagaacatct
ggcagaagtgaagggacatccaggagcaaagcatcaagcggtcctgacgattccagaggt
gacacctatatgagttctgacagacatagtgtcaaagggaggagcgataaagacaagcga
atcggcagtccagacaaagatttgaagaacgctccggataatgcaaggatccccaaaatc
agtgaggatgggagcgttcaagcggacagcctcgcaaacgcgagtggaaaatctccaatg
gggttaaccagcagctgtaatggttctgccgtgccagaggagagtagtccaaagagaaaa
ttaacctttatggaaactctgaacctgaccgtctcgccaattaaaaagcaaaccaacttc
gagcaagctaaagatccagttcctccatctcacgaggacaccctcgtaagcaactcgact
aaggacggaagttcgtttgagcctggagaagagttctgcgtcattgatgaagtagaggat
gactctacggataactccctggcactccttaccaatacaaccacacagccgcatgacgaa
gaaccacagaccagcctggaagtcaagggaaaggaacttgaattgcacaaaaggtttgac
ggtgacctgagtgaaactctatctgggaagatggatggtacagcttcagagatgcaggaa
gatgaatccattacaaaagcagattttctgaattcagttgtatgtcccacgaacctttct
cagaaatatgtggtagagaagattcctgaagttcctgaagttcttttactccctgaaaga
gctaaaccagttgacagtccatctgttcctttaactgacgttcgcgtcaaagaacaagat
tctcaggctcctgtggagaaagacaaggagaagagaaggatcggtgctaagaatcctaat
gaagaagcccaaatagatgataaaccagaggcatcagttcaaaatgacacatctcagcag
gaagtcgccacctctgtcatggcaacctctacggccaagacttgttcaaatactgacccc
tctgtttctctggaagttgtttctagcaccgtcggtatggacaataaccaccaaagcaaa
gaaacaatagctgtttcaggcatggagatcacaccaggccttgagaacccggatccttgt
ccagacccactggtagagccaagcgtcgagacgattgacgtcaacaccacagcgcgagag
gagggaacaccacttgaacaagcgagctcctccgagccagattccacagagaacgagatg
gagatcttcaggccttctaggtctttagtggtgcctcatgatgaagattccatgatgctg
accctgagcaacattaaagtaattccagaagccatcagtcctcttacgagtccagtacgc
cagataaagaaatcccagcagcagcgcttaggaaaggagccacatgtcaaatgtctcagc
aaagatctctccacgtcagccactgtggcagataaggatgcagtcaagatggacatgaac
aaagaaaacaagagacccgattccttagtcaagcctagcgtgccgaaagaacagcaagag
gctctttccactaccgctaccgaagaagacttggaagaaggggagattatcagtgagagt
gatggggaaggtgctctagtcattcagagtcctcccaacgaaaaaagatcaagcttgagg
aatcagcccagtcccagatcgccacggttacagaaaaaatctcaaacgccacccgctgtt
actcccagccgcaaagaacaagagaaaaacactgcttctaaagacagtccctcctcgaac
aagaggcgtttcaaaaccgtcactgttccgcccagggcgaacatttcaacttctgctgaa
tttatgaacatgttgttgtttatacggtcagagttgagacgaaagtacatgaaacttcat
aaaaacgtcaccaaaccagctttttcctgcatcgctgaaatgtctcaggcgtctttcacc
gaatttgttgacagcgttaactttagcaaattctgcagtcatggaaatgaaatcaaacct
ctgctcaataagatcatctcttccgtcatgagcaaggtctcgaacaacggcatcgtgaac
cgtatctttgagcaacgagccgaagatctcaaacagaagctgtggaactttgtagatggc
cagtttgatttcctgtttaaggaactgaaagcaggacttaaaggtgttccagatctttcc
aagaataaaccatctttaaaacgtaagcagtcaaatcctagggcagaagaggatttaaat
gtggattcgtgcaagctgcaatctaaagaacctttgagcacaactgaaaacagaccacct
aaaaaatccaagggtgaagtcgaggaaagcgagggccaaaaggtgcaggagaagatggct
tattcagacagtttgccatgtagaggcttgggtagcagtggtaaaaacataaaggcaacc
atggaggagggggccaaggtaccggaggtacccacacctaaccagtctaatcagccacaa
ggggtttcatcctctgagaaatctctccaagaaagtatccccgcccatgagaacaaagcc
tccaaccatacccgccgtctttctcacagtggatcaatacaagacagggcagactttgaa
attctgaccgagcagcaaacgtcaagtctgacctttaatttggtaactgattcccaaatg
ggagatatattcagatgcctcttgcaagggtccgatctgctagagactggtgataatcaa
aactggccactcaacaccccacggaaagaaggtcaagccggagagagtctcgtcggcatc
atgacacccagcaaaatgataacgccgtcgaagctcatcacaacatggacatccatttca
ccttacaaatttcaaatgccattaaacccagcgctccttgatgaaagctgcatgttggag
gtcccatctaatgctcttcctaaccagtctgcccctgctgtggccacatcgagctcccat
cagtctttctctattttggctgaagatttggccgtatcccttaccattccctcacccttg
aagtcagacggccacttgagcttcttgcacccagccagtggacagccactgaccacacca
agcaacatcatcagtgcccactacagcgaggatgcacttcttgacgaagaagatgccacc
gtgcaagatattcacctgtctctcgaatcggacaactccagtagtccgtcgagtgccagt
ggaaattgggtggctacaaattcacccgtattccagttcaaaccaaacttgcctatgcag
gcagaggtaatggagaggtccaatgatcactttatagttcggatcagacatacttctcct
ggggtacaagaggaacccaaacaggaacacagagaaacgctgccatcagcagaggttttg
tcctcgcgtacatcggatcagagactgcccttggcaggtcagcctcaggtcacctcaaat
caaggaagcgaagctgaattatcaaacaagaacacctcagatggtgtccttgcaggaggc
agtccagccaccttgcccaaaaccaccgagaaccagatcgagcaagctaacgaacattct
gataccactggagtcactgctgccacagaacctgagcatgagctgaacaacgcatgccaa
agggtgtccaggaagcgtaaaaagcatcattcggggccaaaatcaaaacgttctagaaga
gagaaatcgcaagacaatcaagaaaagcaaaggcacaaaaagaagtcaaaatcgtccaag
gataaaaatgagaaaactccatcaaagaagatcaagactccgtctcctcagttgtctccg
aacagtctctctgcaaagaacgtcatcaggaaaaaaggagaagtggtggtgacctggacc
agggaggaagaccgagatattcttgttgcactcaaaacacaaggagcttctgctaaaaca
tttgctgctctgtcatccaagatgggaaagtcacaagcacagattgaagagcggttcacc
cagctcatgaaactgtttaagaagaaggagaaaatggagagctga
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integrated database retrieval system