KEGG   Ictalurus punctatus (channel catfish): 108256743
Entry
108256743         CDS       T04658                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
  KO
K22753  E3 ubiquitin-protein ligase RNF6 [EC:2.3.2.27]
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ipu04121]
    108256743
Enzymes [BR:ipu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108256743
Ubiquitin system [BR:ipu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108256743
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-RING_11 zf-ANAPC11 zf-C3HC4_3 zf-RING_5 zf-RING_UBOX zf-RING_4 zf-RING-like zf-P11 zf-RING_16 Prok-RING_4
Other DBs
NCBI-GeneID: 108256743
NCBI-ProteinID: XP_017309399
Ensembl: ENSIPUG00000010428
UniProt: A0A2D0PTP0
LinkDB
Position
23:complement(5025786..5031934)
AA seq 683 aa
MDPPGGRDERRRQAERLRREEAYYHFINELSEEEYRLMRDSNLLGTPGEVTAEELRQRLD
GAKERVSSQPRPESRPQNSEEGQEGSSAAVEPGTESTNGDSLLEWLNTFRRTGNATRSGQ
SGNQTWRAVSRTNPNSGEFRFSLEININHEQPEPGEHSDTSDPIELPVPQRASASIRTPL
RPTPYSTQHPTPYSTTRPTLGRRAQARRTRSSTTPPITPPLISQAPYTSLRRNLALPQPA
ALPPPPPPPSQAMPTSLPQEQDSTNSVQGQVQTQPPSLSNEEEQEVNDVPDCPEAVSQAS
VQGAAASREARRTRSRGRVRRIAVSRSSRRSRSPLDRNSARSSSPTPGNSAPAIEPAGNT
AAAAAAAAALVETVEVPAEPTVPVESAPEAGTEEGETPASGTAGGVRRHPTIMLDLQVRR
IRPGENRDRDSIASRTRSRARAAENTVTFESDSGGFRRTISRSERAGIRTYVSTIRIPLR
RISETGLGEPSSTALRSILRQIMTGFGELSSLMETEADPESSAPGQNVGVNAAAQTQRAQ
DGEATTGNAVTDSGREGGAAGEAGQARVGANGRDTNNLVENGTLPILRLAHFFLLNDEED
DEHPRGLTKEQIDNLATRTYGQASLEGEQGRACSVCINEYAQGNKLRSLPCAHEFHIHCI
DRWLSENNTCPICRQPILSSHQD
NT seq 2052 nt   +upstreamnt  +downstreamnt
atggaccctcccggcgggcgagacgagcgtcgccgtcaggccgagcgtcttcggcgggag
gaggcgtactaccacttcatcaacgagctgagcgaggaggagtatcggctcatgagagac
agcaacctgctgggtacaccaggtgaagtcacagccgaggagctgagacagcgtctggat
ggagcaaaggagcgcgtgtcctcacagcctcgccctgaatcacgtccacagaacagtgag
gaaggacaggagggcagcagtgctgctgttgagccgggcaccgagagcacgaacggagac
tctctgctggagtggctgaacacgttccggcgcacaggcaacgccacccgcagcggccag
agcggcaaccagacgtggcgtgccgtcagccgcacgaatccaaacagtggcgagtttcgc
ttcagcctggaaatcaacatcaatcacgagcagcccgagccgggggaacacagcgacact
tctgaccccattgaacttcctgtcccgcagagggcctctgcgtctatacgcactcccctg
aggcccacgccctattccactcagcaccccaccccttattctacaaccaggcccactctg
gggaggcgggctcaggcacggcgcactcgcagtagtactaccccacccataaccccacct
ctgatctcgcaggcgccgtatacgagtttgaggaggaaccttgctttgcctcagccagca
gcgcttcctcctcctcctccccctccttcacaggccatgcccacgtccctgcctcaagag
caggatagtaccaacagcgtgcagggtcaagtacagacgcagcctccttcacttagtaac
gaggaggagcaggaagttaacgacgttccggactgtccagaagctgtgtctcaggccagc
gtgcagggggcggcggctagccgtgaggcacgcagaactcgttcacgtggtcgggtccgc
cggatagctgtgtcccggtcctcgcgtcgtagccgctcacctctggatagaaactccgcc
cgaagctctagtcccacccccggcaacagtgcccctgcaatagagcctgctggaaacacg
gctgctgctgctgctgctgctgctgctctagtggagacggtggaagttcccgctgagccg
acagtaccagttgaatctgcccccgaagcgggcactgaggaaggcgagacgccagcgtca
ggcacggcaggaggtgtccgccggcacccgactatcatgttggatttgcaggtgcgcaga
atccggccgggcgagaaccgagaccgggacagcattgccagccgcacgcggtctcgtgcc
cgcgccgctgaaaatacggtcactttcgagagcgacagcggaggcttcagacggaccatc
tcgcgctcggaacgcgctggcatccgcacctacgtaagcactatccgcattcctctgcgc
cgcatctcggagacgggtttgggcgagccgagttccacagcgctacgctccatcctgcga
cagatcatgaccggcttcggagagctcagctctttaatggagaccgaggcagacccggaa
agctccgcccctggacagaacgtgggtgtcaacgctgcggctcagacacagcgagcgcag
gatggtgaagccacaacagggaacgctgtgaccgattcgggacgagagggtggagcagcg
ggcgaggcaggccaggcgagggtgggtgccaacgggcgggacacgaataacctggttgag
aacggcaccttgcccatcctgcggctggcgcacttcttcttgctgaacgacgaggaggac
gacgagcacccgcgcggcctcaccaaagagcagatcgacaatctggccacgcgcacctac
ggccaggcgagcctggagggcgagcaggggcgcgcgtgcagtgtatgcatcaacgagtat
gcgcagggcaacaagctgcgcagcctcccctgtgcacacgagttccatatccactgcatc
gaccgctggctctcggagaacaacacgtgccccatctgtaggcagcccattctgtccagc
catcaggactga

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