Ictalurus punctatus (channel catfish): 108257074
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Entry
108257074 CDS
T04658
Symbol
atxn1a
Name
(RefSeq) ataxin-1a
KO
K23616
ataxin 1/1L
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108257074 (atxn1a)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
108257074
NCBI-ProteinID:
XP_017309974
Ensembl:
ENSIPUG00000001402
UniProt:
A0A2D0PX25
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Position
24:14354830..14466054
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AA seq
764 aa
AA seq
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MKSNQERSNESLPPKKREIPASTLPSEDRPMVMAPASESQRGGNLAWLASMASGHESNKQ
HTSSSAEAEGPQSKPTMSTVESSRAPTATSTIPAVYTSPLSQQAGTIQYSPMHPNLHFIS
PSYAAPYASYISPLVSPAATTTSSHRHTEAYSGTTNSPASKSDPLISNSESIPQPHSTQY
VQISSSQLSVVPCTASSPQSHLPLHLQQTLALSGPSQLLLQYSDGPMSKKEDGRPREMLN
GESERGRRFNHPSESKVSSIAKGSLSTQHHHIHQRDHYDTRHMPLPPVYAQENTSLRNSL
VLVPNSHNSSSADPGGNQDKLPPPLAPAEKGGICAGKPVSRTHSSTCLPFPPPPLPVDGL
KAAVTTLSPHAVIHTTHSATEPLSLGLTSTNFYSAHQPIIGYIAGTGQPQPLSYHTSLPP
HLLIPGTQPVIIPVSGAEATATSTAPTFAAALPHAFVTSAAPKGESFETSASYPHPAGAV
VQAQLHLPILPASASLPATPPIPSTPALPPYFTKGSIIQLADGELKRVEDLKTEDFIQSA
EISSELKIDSSTVERIDSSHTPNCAIIQFAVGEHRSQVNVEVLVEYPFFVFGQGWSSCCP
DRTTQLLELPCARLAVGDVCISLTLKNLKNGSLKKSQGQISDATSLGPLFKPPFKTPPGG
TRRAARHMEQENGLAQCGKQGGVSSQASKENGELGFGEKGACRIPLSSESESISKPAGRK
RRWSAPEGRKVEKLEEEPPSTLPRPSFIPQEVKISIEGRSNIGK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaaccaagaacgaagcaatgagtctttgcccccaaagaaacgtgaaattcca
gcaagtacccttccctcagaggataggcccatggtgatggcgcctgccagtgagagccag
cgtggagggaaccttgcttggcttgccagcatggccagtgggcatgagagcaacaagcag
cacaccagcagctcagcagaagccgaaggccctcagtccaaaccaacaatgtccactgtc
gagtccagtcgtgctccaactgcaacatctaccatacctgctgtgtatacttcaccactt
tctcaacaggcgggcaccatccagtactcacccatgcaccccaacctgcactttatcagc
ccctcatatgcagcgccctatgctagctacatttctcctcttgtgtcccctgcagccacc
accacgtcctcccatcgacacactgaagcctactctggcactaccaattctccagcatcc
aaatccgatccattaatttccaattcagagagcatacctcaaccccattccacccagtat
gtccaaatttccagctcccaactcagtgtagtgccttgtactgcatcttcaccgcaaagc
catcttcccctacacctacaacagacactcgcccttagtgggccctctcagctcctgctt
cagtactcagatggacccatgtccaaaaaggaagacggcagacctagagagatgctaaac
ggtgagtcggaaaggggccgtcgcttcaaccatccctcagaatcaaaggtcagcagcata
gccaaagggtctttatccacccagcatcaccacatccaccagcgagaccactatgatacc
cggcacatgccgcttccaccggtgtatgcacaggaaaacaccagtttgaggaactcgtta
gttctagttcccaacagtcacaactccagcagtgctgatccagggggaaatcaagacaag
ctgcctccccctctggccccggctgaaaaaggaggcatctgtgcaggcaagccagtgtcc
cgcactcactccagcacctgtcttccctttccacctcctcctttacctgtagatggtcta
aaggcagcagttaccacattatcaccccacgcagttatccatacaacacatagtgcaacc
gagccactatcccttggcctcacgtcaaccaacttctactctgctcatcagcccattatt
gggtacattgcaggtacagggcagccacagccgctcagctaccacaccagccttcctcca
cacctgctcatcccaggaactcagcctgttattatccctgtaagtggagcagaagctact
gccacatctacagcaccgacgttcgctgcagcactgccccatgcatttgtgacctcagca
gcccccaaaggtgagtcctttgagacatcagcttcctacccccacccggcaggtgctgtg
gttcaggcccaattgcacttgcctatcctgccagcctctgctagcctgccagctactcca
cctataccttccacacctgctttaccaccctacttcactaagggttctatcattcaacta
gctgatggggagctgaagcgcgtggaggacctaaagacagaggacttcattcagagtgct
gaaatcagcagtgaattgaagattgactctagtactgtggagcgcatcgacagcagccat
acacctaactgtgctataatccaatttgcggtgggagagcatcgttcacaggtgaatgtg
gaggtgctggtggagtaccctttctttgtctttggtcagggctggtcgtcttgctgtcca
gaccgtaccactcagctgttggaactgccttgcgccaggctagctgtgggcgatgtctgc
atttccctcactctcaagaacttgaaaaatggctcactgaaaaagagtcaggggcagatt
tcagatgctaccagtcttgggccactttttaaaccaccttttaaaacacccccaggagga
acacgcagggcagcacggcacatggagcaggagaatggactggcacagtgtggcaagcag
ggaggagtgagctcccaggcaagcaaagaaaatggagaactaggttttggggagaaagga
gcctgtagaattccactatcttcagagtcggaatctatcagcaaacccgcaggccgaaag
cggagatggtcggctccagaaggtcgcaaagtcgagaagcttgaagaggaaccaccctca
actcttcctaggccttcatttatccctcaggaggttaaaatcagcattgaaggcagatcg
aatattggcaaatga
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