Ictalurus punctatus (channel catfish): 108257106
Help
Entry
108257106 CDS
T04658
Symbol
nr5a5
Name
(RefSeq) nuclear receptor subfamily 5, group A, member 5
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108257106 (nr5a5)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ipu03310
]
108257106 (nr5a5)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
108257106 (nr5a5)
Nuclear receptors [BR:
ipu03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
108257106 (nr5a5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
108257106
NCBI-ProteinID:
XP_017310021
Ensembl:
ENSIPUG00000005850
UniProt:
A0A2D0PX60
LinkDB
All DBs
Position
24:18137063..18146762
Genome browser
AA seq
534 aa
AA seq
DB search
MNVSGFHPETPQSSTAHPAGNTQDVTMQERPSTSEEMKPDPDIHAEPEEACPVCGDRVSG
YHYGLLTCESCKGFFKRSVQNNKRYTCTERQSCPMDPAQRKRCPYCRFQKCLAVGMKREA
VRADRMRGGRNKFGPLYRRDRQMKQQRGGYHQANIGPYRIKLEGPRAPLQPHEFHLLPGA
FAAPLGSDPFHQSHALPPSINQPELMVLDCTLNRDGALTAPSLPCAGLYHTSFHGFPHEK
REMPFSYGPATLCTISTPVLTPSSTHTLASTPTSDPTSSPFLTPTLTPDPPSSNTGFLSE
LLQGEPEESQVCSRVVASLLKEQASRGKHDRLNTFSIMCKMADQTLFGLVEWARNCALFK
ELKVEDQMVLLQSCWSELLVLDHLCRQVAYGIDGSIYLVTGQKIDVSTVLSQAGVTLSSL
VSRAQDLVSKLRALHLDRQEFVCLKYLVLFNPDVKSVQDRRQVERTQERVNRALMEHTLH
THPGQSDKFGQLLLRLPEVRSISLQVEEYLYQRHLLGDLPCNSLLTEMLHTKHT
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtttcaggttttcacccggagaccccccagtcctcaaccgcacaccctgctgga
aacactcaggacgtgacaatgcaggagagaccatcaacctctgaggagatgaaaccggac
cctgatattcatgcagagccagaggaagcctgtcctgtgtgtggtgaccgagtgtctgga
tatcactatggattgctgacctgtgagagctgcaagggattcttcaagcgctctgtgcag
aataacaagcgctacacctgcaccgagaggcagagctgtcccatggacccagcgcagagg
aagagatgcccttactgccgatttcagaagtgcctggctgtgggcatgaagagagaggct
gtgcgggcagaccgaatgaggggcggacgaaacaaattcggacctctgtatcgacgggac
aggcaaatgaaacagcagagaggaggatatcaccaagcaaacatcggtccctacaggatc
aaactggagggaccgcgagcacctttacaaccgcacgagttccaccttctgcctggtgct
ttcgcagctccgctaggctctgacccctttcaccaatcgcacgctcttccacccagcatc
aaccaaccagagctcatggtcctggactgcacattaaacagagatggtgcattgaccgct
ccttcgctcccctgtgctggactctaccacaccagtttccatggtttccctcatgagaaa
agagagatgcctttcagctacggtcctgctacactgtgcactatttccacacctgtgctc
actcccagctccacccacacactggcgtcaactcctacttcagatccaacatcgtccccg
ttcctgaccccaaccctgacccctgaccccccctcatccaacacaggcttcctgagtgag
ctgctgcagggagaaccagaggagtcacaggtctgttcacgagtggtggccagcctgctg
aaagagcaagccagccgaggaaaacacgaccgtctcaacacttttagcatcatgtgcaaa
atggccgaccagactctgttcggactggtggagtgggcgcgcaactgtgcactgtttaaa
gaactcaaggtggaggatcagatggtgctgctgcagagctgctggagtgagctgctggtt
ctggatcatctgtgccgccaggtggcttatgggatagacggtagcatctatctggtcaca
gggcagaagattgatgtgtcgactgtgctctcgcaggcgggggtgacgctgagcagtctg
gtgtccagagcacaggatttagtgtccaagctcagggctcttcatctggacagacaggag
tttgtgtgcctcaaatatcttgtgctgttcaacccagatgtgaagtcagtgcaggaccgc
aggcaggtggagcgcactcaggagcgagtgaacagggctctgatggagcacacgctgcac
acacacccaggccagtcggataaattcggccagcttctgctccggctgcctgaagtgcgc
agcatcagcctgcaggtggaggagtacctgtaccagcgccacctgctgggggacctgcct
tgtaactccctgctgaccgagatgctgcacaccaaacacacctga
DBGET
integrated database retrieval system
