Ictalurus punctatus (channel catfish): 108258135
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Entry
108258135 CDS
T04658
Name
(RefSeq) fibronectin type III domain-containing protein 1 isoform X1
KO
K24484
fibronectin type III domain-containing protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108258135
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
108258135
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TARSH_C
fn3
Pur_ac_phosph_N
CRLF2-like_D2
Interfer-bind
MG2
Motif
Other DBs
NCBI-GeneID:
108258135
NCBI-ProteinID:
XP_017312041
Ensembl:
ENSIPUG00000022909
UniProt:
A0A2D0Q2X3
LinkDB
All DBs
Position
25:complement(2228978..2269581)
Genome browser
AA seq
1670 aa
AA seq
DB search
MCPPAARALPALLLALCSLSPMLTAFKPLHPRNVKLTSVEKGLRVTWDPPNELDGRPVDR
YSIGYGKSMRSLRFIKVDKDRRSEVLEDVEPGVLHFLKINSENEEGMSKPVYRAETPGGG
EWVKLDGFAVEGGSSANASSPGRRSSELSSQISPRPTVQRPTLLRQRAPQSSSGPEAPRR
GGYLPIRSQNKHRVDLSQPQADQRNANKPKLASESIHVISLQAQKAPQRNIPVSKTENPP
PERDVVEDVEDITVRILSPQSVVITWVDPLVQKQKGIPEGTRQYTVRYREKGESARWEYK
ETSQRRLVIEKLSADGMYEFSVRITQGDQHGKWSVSVFQRTPESAPSGPPENFEVRPLRG
KGTAVTATWDPPDEPNGKIREYILSYAPALKPFGAKSVTYRGTTTSATIDGLTPGDRYIF
RIRAANRKGQGPQSKTLSVAMPGTSTTASRHSTQSKSPSRTSEYDDSQDQDTEDTEESQT
HTTTSPPTNKKFRPLSQTRSYHSIFSSVRGSVRNSGSSSRTSISSDKERNEEETPTDTPK
EDEATANEAVEDIQPENTNNVPSKTGEEEQPKVSAGAKEPSSILRSSLLKTHSSPPMPKE
GHHQSQSLTPRTSVVNAGRLRRPPFSSSRSRNQKGASSSLPNSQDPVVSKKVHTILYPED
KVSTTAAQSSTPSPHETKMETERESSSLSLSLPLSSAGTSRVSNPTSHSSSSGTGPVYPN
GRRVTQTKGHRYQTSRQKTALPSSALSQASTGSSTGYQDSRSTSIVDTKHDNKKDHKIKI
KNNDDPPASYQYTTTLSPSIKEETTQDLGNKNYKDKAVNSYLPSSQSPSTASPGHSSSLS
NRNSRVVVGSSQRKDGRIPWSRTASSVGAGRPILRGMPSNPTATGGHVSGKNKTSPTTYT
TKHLDDSNLAKPTVNSRQPVSSNGQTTSNDHTDKEDTNPSNDHKHDYLSEVNKETREISN
TNSVPTASPKTVASDDKEVQRSGKTSQNNSPYMTLNRLGLGSNGKVRSALLERLRGRLQT
VQNTQLGSAAKQNASSSPVSASSSSSASQTMEHKASPSDHGTDGSQSANVRSTMGSVSRS
SLKQTATDQNSGGDTPTDFKTSLTAPARNPVVRSRYPSRPDKNSRGKPPVSLHKPSYGQG
KNGRPNLTATNGKIASTSDENKKANGVKYITGPDGTRWVVDLDKGVLMNEEGKVLQDSRG
RPRKVVVGEDGKTIFDEQGTPLVNQEGMALFGNGRDGRPVVNPRDKYLTVGGKPVVGLDR
PTPSTTTTTTTTTTPTPTTTTTTTTTTTTTAESTTTEITTLESTTEALPTCPPGTFPRLD
MNGIPVMDVYGILDCYPSDEFLMETTMFPTTTQVPTTTHTPTTEFRFFNHSPSSDFDVAG
KKRFTAPYVNYIQKDPGAPCSLTEALEYLQVDVLADLIEKDRGTTIQKQPPKYKPHNITV
IAMEGCHSFVILDWARPLKDDMVSGYMVQSASYDDVLNNRWSSTLSSGTHLAVENLKPNS
RYYFRVQAKNVFGLGPISETLTYVTESDNPLLIERPPGGEPIWIPFTFRYNHAHSSCRGS
QFVKRTWYRKFVGVVLCNSLRYKIFMGDGLKETFYSIADSYGNGEDHCQFVDSHLDGRTG
SQTLSLYLPQAQGYYRSYRQEPVNFGPIGRRTPHQFVGWYECGVPIPGKW
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgtgtccaccggcagcacgcgcgctccctgcgctcctgctcgcgctctgctccctcagc
ccgatgctcacagcatttaaaccactccatccacgaaatgtgaagctaacgtcagtggag
aagggattaagggtgacatgggacccacctaatgagttggacggtcggccagtggatcga
tacagtatcggctacggcaagtctatgaggtctctgcgcttcatcaaggtggacaaggac
cgccgctccgaggtactagaggacgtagagcctggagtcctgcacttcctcaagatcaat
tctgagaatgaggagggaatgagtaaaccagtctacagagcagaaactccaggaggtgga
gagtgggtaaaactggatggctttgcagtcgaaggtggatcttctgcaaacgcttcctca
ccaggtaggaggtcatctgagctctcctctcagataagccctcgccctacagttcagaga
ccgacacttttacgacagagggccccacaatcctcctcaggccctgaggctccacgcaga
ggaggatacctgcccatacgctctcaaaacaaacatagggtggatctcagtcagccccag
gcagaccaacgcaatgctaacaaacccaaacttgcatctgagtccatccatgtgatatca
ctgcaggcacagaaagcaccacagaggaacataccagtaagcaagacagaaaaccctcct
ccagagcgagatgtagtggaggacgtggaagacatcacagtgaggattctgtctccccag
tctgttgtaatcacatgggtggatccacttgtccagaaacagaaaggtatccctgaaggc
accaggcaatacactgtcagatatagagagaagggagagtctgctcggtgggaatataag
gagacctcacagaggcggctcgtgattgagaagctctctgccgatggaatgtatgaattt
tctgttcgaatcactcagggagaccaacatggaaaatggagtgtatctgtattccaaagg
actcctgaatcagctccctctggccctcctgagaactttgaggtgcgaccacttagaggg
aaaggtacagcggtgactgcaacatgggatccacctgatgagcccaatggtaaaatcaga
gaatatatcctgtcctatgctccagccctgaaaccctttggagcaaagtcggtaacatat
cgtggcactactacctcagccaccatagatggactgacacctggtgatcgctacatcttc
agaattcgagcagctaacaggaaggggcaaggaccacagtctaaaaccttgagtgttgca
atgccgggaaccagcactactgcctcacggcattccactcagtccaagagcccctccaga
acatctgaatatgatgactcacaggatcaggatacagaagacacagaggaatcgcaaacc
cataccactacttctccacccacgaacaagaaattccgtcccctttctcaaacacggtct
tatcacagcattttttcatctgtaagaggctctgtccggaattcaggttccagctctagg
acaagcattagcagtgacaaagaaagaaatgaagaagaaacaccaacagacactccaaaa
gaagatgaagcaacagcaaatgaagctgttgaggatatacaacctgaaaatactaacaat
gttccgtctaaaactggggaggaagaacaaccgaaagtttcagctggagctaaggaacca
agttctattcttagaagttcattactaaagacacattcttcccctccaatgcccaaagag
ggccatcaccaatctcagtcgttgacacctcgcacgtcggttgtcaatgccggccgttta
agacggccaccctttagttcctcacggtcaaggaatcagaaaggagcatcttccagttta
cccaacagccaagaccctgtagtctcaaagaaagtccacaccatcttatatcctgaagac
aaggtcagtactacagcagcacaatcatccaccccatcacctcatgaaaccaagatggaa
acagagagagagtcatcatctttatcattgtctttgccattgtcatcagctgggacaagt
agagtttctaacccaacaagtcattccagtagctcagggactggtcctgtttatccaaat
ggcagaagggtaactcaaactaagggtcacagatatcagacaagtcgacaaaaaacagct
ttaccttcgtctgctttatcacaagcttcaacaggatccagtactggctatcaggatagc
cgctcaaccagcatcgtggatacaaaacacgacaataaaaaggatcacaaaataaagatt
aaaaataatgacgacccacctgcctcttatcaatataccactactctttccccttcaatc
aaagaagagactactcaggaccttggtaacaagaattataaagacaaggctgttaacagt
tatttgccttcatctcagagtccttctacagcaagtccagggcatagttcctccctctct
aacagaaattccagggtcgtagttggaagtagtcaaagaaaagatggcaggatcccatgg
agcaggactgcttcttctgtaggtgcagggaggccaattctgagaggaatgccatccaat
ccaacagccacaggagggcatgtcagtggtaaaaacaaaacctcgccaacaacctacacc
acaaagcatttggatgactcgaacctagccaaacccactgtgaacagcagacaaccagtt
tcaagcaatggacagacaacttctaatgatcacactgacaaagaagacacaaaccctagc
aatgatcacaaacatgattacctctctgaggtcaacaaagaaactcgtgagatcagcaat
acgaattctgtcccaactgcatcccccaaaacagttgcctcggatgataaagaggttcaa
cgatctggtaaaacctctcagaacaactcaccctatatgactctcaatagacttggttta
ggttcaaatggaaaggttcgttctgctctcctcgaaaggttgcgtggaaggttacagaca
gtacaaaatacacagttgggctctgctgctaaacagaacgcctcttcatcacccgtttca
gcttcttcatcctcttctgcctcccagaccatggaacacaaagcttcaccttcagatcac
ggtacagatggtagccaaagtgctaatgttagatcaaccatgggatcggtctcacgatca
tcgttgaagcaaactgctactgatcaaaattctggtggcgacacaccaactgatttcaag
acctccttaacagctccagctagaaatccggtagtcagatcacgctatccaagcagacct
gacaaaaattcaagaggaaaacccccagtcagcttgcacaaacctagttatgggcaaggc
aagaatgggcggccgaatcttacagctacaaatggcaaaattgcatctacatcagatgaa
aacaaaaaagcaaatggagtcaaatatattacaggccccgatggaaccagatgggttgta
gatctggataaaggagtcctgatgaatgaagaaggaaaagttttgcaggattctagagga
cggcccaggaaagtcgtcgttggagaagatggaaaaactattttcgatgagcagggtacc
ccgttagtaaaccaggaagggatggctttgtttggtaatgggagggacggtcggcctgtg
gttaaccccagagataagtacctcactgttggagggaagccagtggtgggcctggatcgt
cctacacccagtactacaaccacaacaaccacaacaactacacctacacctacaactaca
actacaactacaaccaccaccacaaccactgctgaatcaacaacaacagaaattacaact
ctggagtccacaactgaagcattgcctacctgcccccctggaacatttccgaggctggat
atgaacggcattcctgtgatggatgtttatggaatactggactgctacccaagtgatgag
tttttgatggagaccaccatgttccctaccaccactcaggtgcccactaccactcatacc
cccactaccgagttccgcttcttcaaccacagcccatcctctgactttgatgttgccggc
aagaaacgcttcacagctccatatgtgaactacatccagaaggatcctggtgcgccgtgt
tccctgactgaggctctagaatacctgcaggtggatgtcctggctgatctcattgagaag
gacaggggcacaaccatccaaaagcagcctcccaaatacaagccccataacatcactgtg
atcgccatggagggctgccactcatttgttattttggactgggcccgtccattgaaggat
gacatggtgtcagggtacatggtgcagagtgcctcctatgatgatgtcctgaacaacaga
tggtcatctactctctcatctggcacccatctagctgtggagaacctcaagccaaactcc
aggtattacttcagagttcaagcaaagaacgtgtttggtctagggccgatcagcgaaaca
ttaacttatgttacagaatcagataaccctcttcttattgagagacctccaggtggcgag
cctatttggattccttttacctttaggtacaaccatgcccacagttcctgtagaggaagt
caatttgtcaagcgcacctggtacaggaagtttgtaggtgtggtcctgtgcaactcactg
cgctacaagatctttatgggagatggactaaaggaaactttctacagtattgctgattct
tatggcaacggagaagaccactgtcagtttgtagactcacatttggatggaaggacagga
tcacaaaccctttccctctacctaccccaagctcaaggttactatcgctcgtatagacaa
gagcctgtaaatttcgggcccataggcaggcgtacgcctcatcagtttgtgggctggtat
gagtgtggggtcccaatccctgggaaatggtaa
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integrated database retrieval system
