Ictalurus punctatus (channel catfish): 108258180 Help Entry 108258180         CDS       T04658                                  Name (RefSeq) protein CASC3   KO K14323   protein CASC3 Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu03013   Nucleocytoplasmic transport ipu03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:ipu00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     108258180    03015 mRNA surveillance pathway     108258180  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ipu03019]     108258180 Messenger RNA biogenesis [BR:ipu03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      108258180 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Btz Motif Other DBs NCBI-GeneID:  108258180 NCBI-ProteinID:  XP_017312139 Ensembl:  ENSIPUG00000002679 UniProt:  A0A2D0Q1G2 LinkDB All DBs Position 2:complement(29580202..29590165) Genome browser AA seq 746 aa AA seqDB search MADRRRRRRRASQDSEDDDESASGSESGRSASPGAKTRVRVPEPGETPAVRVAPKSDVES ECESEDGVGEAVLSDYESADPEENGSRSEGGEEEEEVEHFSQEDAAPPTAEPKAAAEAPT EVLVEEEEEEEEEEEGEEEEEEEEEREMKEVKADEKGNLAGERQSGDGQESTDDPENKSA SKPGQKLDDDEDRKNPAYIPRKGLFFEHDVRGQTQDEERPKGRHRKLWKDEGRWEHDKFR EEEQAPKSREELIAIYGYDIRNGNGSSDTRPFKPRKPRHPGPLNQESKRYRDVEKPPRSS WHGAAPVARSAPPVTGTSQSGFPAAPRPQNRPSTQPPARTFQSSRRPEIIRSHPKASTRP QAPESERAPRLRGRGSHGTPHHARRSPQEDEEEEGEIPIVPTTYYKSEQETSSSSQQKEE CGTTAEQQSSAPGTVREVSPPPERPVEKKSYSLARRSRARPSDLSKQASLEEAVLTPQVV PTAAKTESWQGQGDAGTQSGLSRLDQDLARLNLAGQSWTQSPASYLRPEMRGIPSSIHMG GGPPQYGNMEDMGVGGGRAKRYSSQRQRPVPEPAPMHIGLMEGHYYETMSFQGPIYTHGD SPAAMPPQGLLVQPEMHLPHPTHPGLHPHQSGGPIPNPALYAAPPVSLSPGQPPPQQLLP PPFYPPPGVMTFSNTNYPYPAGATLPPIYPNAQAQSQVYGGVTYFDTVQQQAQPKPSPPR RTSQPVTVKPPPPEDQSRKPSEEVRS NT seq 2241 nt NT seq  +upstreamnt  +downstreamnt atggcggaccggcgacgacgaaggaggcgcgcgtctcaggacagcgaagatgacgacgag tctgcgtccgggtcggagagtgggagatcggcttcccccggcgcgaagacccgtgttaga gtccccgagccgggggagactccagctgtgcgcgttgccccgaaaagcgacgtcgagtcc gagtgtgaaagtgaagacggtgtaggtgaagctgtcctttctgactatgaaagtgctgat ccggaggagaatggctcgcgctcggagggaggagaggaggaggaggaggttgaacacttc agtcaagaagatgctgcacccccaaccgcagagccgaaagcagcggctgaagctcctact gaagttttggtagaggaggaggaggaggaggaagaagaagaagaaggggaggaggaggag gaagaggaggaggagagagaaatgaaagaagtgaaagctgatgaaaagggcaacttggca ggagagaggcagagtggggatggtcaggagagcacggatgatcctgagaataagtctgct agtaaacctggtcagaagttggatgatgatgaggaccggaagaatccagcgtacatcccc cggaagggcctgttttttgagcatgatgtgagaggccagactcaagatgaagagagacct aagggcaggcataggaagttgtggaaagacgagggtcgctgggagcacgataaattccgg gaggaggagcaggcccccaaatcacgcgaggagctgattgctatttacggttacgacatt cgcaacggcaacggctccagtgacaccagaccattcaagccacggaagcccaggcatcct ggcccgctaaaccaagaatccaagcgttacagggatgttgagaagcccccccgctcctca tggcatggtgcggctcccgttgcccgcagtgccccgcctgtgacaggaacgtcccagtca ggttttcctgctgctcctcggccccagaatcgaccctccacccagccccctgcacgcacc ttccagagcagtcgtcggcctgaaataatcaggagtcatcctaaggccagcacgcgaccc caggctcctgagagcgagagggcacccagacttaggggccgaggttctcatggaacccct caccatgcccggcgcagtccacaagaagatgaagaagaggaaggtgaaattcccattgta cccaccacttactacaaatctgagcaggagacaagctcttcatcgcagcaaaaggaggag tgtggaacaacggcggagcaacagtcgagcgcacctggcacagtaagggaggtgtcacca cctcctgagaggccagtggagaaaaaatcctactcactggcacgtaggagccgggccagg ccctcggaccttagcaagcaggcctcgctggaagaggcggtgctcaccccacaggttgtg cccactgctgccaagaccgaatcatggcagggacagggtgatgcgggcacacagagtggc ctgtcaaggctcgatcaggacctggcccgtctcaatctggctgggcaaagctggacccag agtccggcctcatacctccggcctgagatgaggggcatccctagttctatacatatggga ggtggacctcctcaatatggcaacatggaggacatgggtgtcggtggtggccgggctaag cggtattcatctcagaggcagaggccggtgcctgaaccagcgccaatgcacatagggctt atggagggccactattatgaaaccatgtcattccagggaccaatctacacacatggcgac agtccagctgccatgccaccacagggactgctggtgcaaccagagatgcacctgcctcac cccacacaccccggcttgcatcctcaccagtcaggaggaccgattccgaaccctgcgctt tacgctgctccgcccgtttctctgtcacctggacagccacccccacagcaacttcttccc ccacccttctaccctccacctggagtcatgacatttagcaacaccaactacccttaccct gctggagctacactaccccccatctaccccaatgcacaggctcagtcacaggtgtatggc ggagtgacgtattttgacacagtacagcagcaggctcaacccaaaccttctccaccacgc cgtacttcacagccagtcacagtcaagcctcccccgccagaggaccagagcaggaagccc agtgaggaggtgcgctcctag

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