Ictalurus punctatus (channel catfish): 108258584
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Entry
108258584 CDS
T04658
Name
(RefSeq) melanoma-associated antigen E1 isoform X1
KO
K13358
sodium/hydrogen exchange regulatory cofactor NHE-RF2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108258584
Transporters [BR:
ipu02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
108258584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
EBP50_C
PDZ_2
Motif
Other DBs
NCBI-GeneID:
108258584
NCBI-ProteinID:
XP_017312782
Ensembl:
ENSIPUG00000006968
UniProt:
A0A2D0Q3B2
LinkDB
All DBs
Position
26:complement(18012391..18026870)
Genome browser
AA seq
784 aa
AA seq
DB search
MRTATSRFSPRFEPGHSRAVQGERSPGRHRGDVGIKNGPVYYLSVEAVETEVEATTMTTM
TTMTTMTKADSVQKEMEERNLRPRLCYLTKGECGYGFHLHGERSSGAQFIRRIEAGSPAE
LAGLRSGDRVVEVNGENVEKDSHQQVVQKIMEVENRTRLLVADRETDEFLLLHSLPCTED
LAVEMSCLLSPRTSSSSLASSTLSFSSSSRGSVTPSSQDSIILSPRDFITHSLSDSITPT
LLPKSITSSPRDSVAPLPSDSVIPSPQNSTPPSPRISVTPSPENAIIQSSRSSINQLPSN
FIPQSPYDSITQSPSNFIPQSPYDSITQSPSKSIPQSPYYSITQSPSNSITQSPSNSIPQ
SPSKSIPQSPSNSITESPSKSIPQSPYDSITQSPSNSIPQSPYDSITQSPSNFIPQSPYD
SITQSPSKSIPQSPSKSIPQSPYDSITQSPSKSIPQSPSKSIPQSPYDSITQSPSKSIPQ
SPSKSITQSPYDSITTPFIREKSDETHVMDVIITTDNKETSGTEDTVMRDLRPRLCHIVK
NEQDFGFNLHCDKRRVGQFIRSVDPDSPAHRAALQPGDRLVQVNGRSIEGLRHSEVVEII
RSGGGETKLLVVDPETDALFQKLGITPTTAHLNEDCVDGPIIESPTSTCPITDTSVSPTK
PRNGLLIQPPVTTGAPTGNGSLKHQSHGSSSSSRSITSETSVELSSSDISSKVLDSEQCK
YNSAPGVQEVKGEKEVKDLDPLRASGLHLSSTAAEARQKVRSKKASKRAPPMAWNKKYEI
FSNF
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgcgcactgctaccagtcgcttttctccacggttcgagccagggcacagccgagcagtt
cagggcgaaaggtctcctgggaggcaccgtggtgacgttgggattaaaaatggcccggtc
tattatctgagcgtagaggcggtggagaccgaggtggaggcgacgacgatgacgacgatg
acgacgatgacgacgatgacgaaggctgacagtgtgcagaaggagatggaggagaggaat
ctgcgtccccggctgtgctacctgaccaaaggcgagtgcggttacggcttccacctgcac
ggagagcgcagcagcggtgcacagttcatccgcaggatcgaggcgggatctccggcggag
ctggcaggacttcggtccggggaccgcgtggtggaggtgaacggagagaacgtggagaag
gactcgcaccagcaggtggttcagaagatcatggaggtagagaacaggacgaggctcttg
gtggcggatcgagagacggatgagtttctgctcctccactctttgccctgcactgaggac
ctggccgtggagatgagctgcctcctctcgccacgcacctcctcgtcttccctcgcttct
tccactctgagcttctcctcatcgtcgcggggctccgtcactccatcgtcacaagactcc
atcattctatcaccacgagacttcatcactcactcactctctgactccattactccaaca
ctgttgcccaaatccatcacttcatcaccacgggactccgttgctccgttacccagtgat
tctgttataccatcaccacaaaactccactccaccatcaccacgcatatctgtcactcca
tcaccagaaaacgccatcattcaatcttcacgcagctctattaatcaattaccatccaac
ttcattcctcaatcaccttatgactccatcactcaatcaccatccaacttcattcctcaa
tcaccttatgactccatcactcaatcaccatccaagtccattcctcaatcaccttattac
tccatcactcaatcaccatccaactccatcactcaatcaccatccaactccattcctcaa
tcaccatccaagtccattcctcaatcaccatccaactccatcactgaatcaccatccaag
tccattcctcaatcaccctatgactccatcactcaatcaccatccaactccattcctcaa
tcaccttatgactccatcactcaatcaccatccaacttcattcctcaatcaccctatgac
tccatcactcaatcaccatccaagtccattcctcaatcaccatccaagtccattcctcaa
tcaccctatgactccatcactcaatcaccatccaagtccattcctcaatcaccatccaag
tccattcctcaatcaccctatgactccatcactcaatcaccatccaagtccattcctcaa
tcaccatccaagtccatcactcagtcaccctacgactccatcactactcctttcatcagg
gaaaaatcagatgagacccatgtaatggacgtcatcatcaccacagacaacaaggagacg
tcaggaacagaggacacggtgatgcgtgacctgaggccgcggctgtgtcacatagtgaag
aacgagcaggatttcggctttaacctgcactgcgataagcggcgtgtgggtcagttcatc
cgctcggtcgaccctgattcccccgcacacagagctgcactacagcccggagacagactc
gtccaggtgaacggcagaagcattgagggtctgaggcactcggaggtggtggagataatc
cgaagcggaggaggagagaccaagctgttggtggtggacccagaaacagacgctctgttt
cagaaactcggcatcacaccgactacagcgcacctcaacgaggactgtgtggacggtccg
atcatagagagtccaacctctacctgtccgatcacagacacctctgtatcgcctacaaaa
ccccgcaacggcttgctgatccaaccgccggtcacgacgggtgcaccaaccggaaacggc
tctctgaagcaccagagtcacggaagctcctcctcctccaggtccatcacttcagagacg
agtgtggagctgagcagctctgacatcagcagcaaggtgttggattcggagcagtgtaag
tataacagcgcccccggtgtgcaggaggtgaaaggggagaaggaggtgaaggatctggac
ccgctgagggcgagcggcctgcatctgagctccacagcggccgaggccaggcagaaggtc
aggtcgaagaaggccagcaagagagcgcccccgatggcctggaacaagaaatacgagatc
ttcagcaacttctga
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