Ictalurus punctatus (channel catfish): 108259995
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Entry
108259995 CDS
T04658
Symbol
lhx1b
Name
(RefSeq) LIM/homeobox protein Lhx1b
KO
K09372
LIM homeobox protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108259995 (lhx1b)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
108259995 (lhx1b)
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108259995
NCBI-ProteinID:
XP_017315377
Ensembl:
ENSIPUG00000022351
UniProt:
A0A2D0QAQ1
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Position
28:complement(3252648..3263674)
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AA seq
396 aa
AA seq
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MLQCAGCERPIMDRFLLNVLDRAWHAKCVQCCDCKCNLTEKCFSREGRLYCKTDFFRRYG
TKCGGCSQVISPTDLVRKARGKVFHLNCFTCIICNKQLSTGEELYILDESKFVCKEDYLS
NSTGKDANLLSITTCSEPSLSPDSQDPQDDGKDSEAGHLSDKDTCSNENDEQSAGAKRRG
PRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLS
ALGARRHVLFRSARRMRALGERVEPAELMMPNGHFSYYGDYQGEYYGPGGNYDYFPHGPP
SSQAQTPGDLGYVPSSGPAGTPLGTMDLHHSGHHPSGETQCFGEMVPQHPVDSPSPEHSI
SADMSGAFTSIGSLGTNGYSSQLSQPSSEMSEGTVW
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgctccagtgcgccgggtgcgagcggcccatcatggacaggttcctcctgaacgtgctg
gaccgcgcgtggcacgccaaatgcgtccagtgctgcgactgcaagtgcaacttaacggag
aaatgcttctccagagagggcaggctttactgcaaaacggacttttttagacggtacggc
acaaagtgcggaggctgctctcaggtcatctcccctactgacctcgtccggaaggccaga
ggcaaagtgtttcacctcaactgcttcacgtgcatcatatgcaacaagcagctgtccacc
ggtgaagagctctacatcctggacgagtcgaaattcgtttgcaaagaggattacctgagc
aacagcaccggcaaggacgccaacctgctctccataacgacgtgcagtgagccgagcctg
tctccggactctcaggacccacaggatgatgggaaagactcggaagcgggtcacctctcg
gataaagacacgtgcagtaacgagaacgacgagcagagcgcgggggcgaagcgacgcggc
ccgcgcaccaccatcaaagccaaacagctcgagacgctcaaagcggcgttcgcggccacg
cccaaacccacaagacacatccgggaacagctcgcgcaggagaccggcctcaacatgcgg
gtcattcaggtatggttccagaaccggcgctcaaaggaaagacgtatgaagcagctgagt
gcactgggggcgagacgtcacgtgctgttccgcagcgcgaggagaatgagggcgctggga
gagcgagtagagcctgctgagctcatgatgcccaatggacacttctcttattacggagat
tatcaaggcgaatactacggaccaggaggcaactacgactacttcccccacggtcctcca
tcctcacaggcgcaaactcccggcgatctgggctacgttccctcctcaggcccagctgga
actccactgggcaccatggaccttcaccattctgggcatcacccctccggagagacccag
tgttttggcgagatggtgccacagcatccagtcgactcccccagcccggagcatagcatc
tcggcggacatgagtggcgcgttcacttcgattggctcacttggtactaatggatacagc
agtcagctctctcagccttcctcagaaatgagcgaaggtaccgtgtggtag
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