Ictalurus punctatus (channel catfish): 108260564
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Entry
108260564 CDS
T04658
Symbol
sorbs2a
Name
(RefSeq) sorbin and SH3 domain-containing protein 1 isoform X3
KO
K23708
sorbin and SH3 domain-containing protein 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108260564 (sorbs2a)
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
108260564 (sorbs2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
Sorb
Motif
Other DBs
NCBI-GeneID:
108260564
NCBI-ProteinID:
XP_047008327
UniProt:
A0A979E5B6
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All DBs
Position
29:complement(1685573..1735678)
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AA seq
1629 aa
AA seq
DB search
MNAGSESHLSDSDGWRSRSVTDRLRNGDTSSSTLTAKGYRSVRPNLQDNSSPVPVPLPPP
RRESYHMTPNPPPYSSLVPSGSYAVKSSSSSSYSYSETTRATSTGSDISPEANANANANN
FISQLLERKVSSLKFANEGSNAVAANAKTSAGVTNSTNMNQLWANTNMAKVMNPGSPDSP
PSPPLRTHSKSPATTHTASLSIRIAPKGSEYHPESGLQSGFGSVRQDPAGPSPKVPPRPA
GDVVRDVSPPRGTADFVCGSSYSCTSQDSPDFLSGPNASSPSLSALSHYSSSTAVLEELQ
ICAVDSAEATPTPSPTLSHASVTHDDVPPPTASATAADTNGQMAVNGSAHSQRPFSPPAQ
RPPPPVFSPGLEHFQQMRHSEGSESVQRESVSVGETSFSSVTPVARFSEEEKKVSVIKAP
HYEGIGPVDQSGLPLAIRTTVDRPKDWYKTMFKQIHMVHKADDDYADTYGATYAVVNNEN
FDPVHAHPPPRTHTYRPLSQNPNEPGRAPPPRDSSPVPPPPPPMPSLLQLRSQDLDREKE
HPHDPNEWSPPDRKVDTRRYRAEPRSIFEYEPGKSSILEHERPSFDLEADEIDLENEPWF
KFFSELEFGRPPPKKRLDYTPDCSTHSRAQTSLYLSSSERPESASSDYRKRRKSEPFVTQ
QSTGNEQNAGPVSKLEPYKSSSLKKPTVRSSPSSPAKAKDQGSDAGRLTPQIRKPTPDRE
RQSARAIYDFKAQTSKELSFKKGDAINIVRQIDSNWYEGEHRGRIGIFPISYVEKVVSPE
RKQPVRPPPPAQLREMGEAVARYNFNADTNVELSLRKGERVILLRKVDKNWYEGRIPGSS
KQGIFPVSYVDVIKGSPSKSPGHRVDTYRVQKPHPASLGSAPYPHLQEVTSEWLSLTLGV
TAFSPSPCSTPVPPTPPPLPSILHCPSTPPPTPPPLTQAPTTLQHSSMISNSSPPPPLMA
PPLLHNPASLVTDHSHLFNSGNHFPAAQTTRLQKKLSSDQNQELYIVEAEATGHKTPTAE
QQQSRDLATLITDTNPYDKILTMFLGKHLSQEAENMEPCTPLADESSKTCVLVSPDRLTL
KKPCQEPVRLTSQSENPPDDEGIYGEWSSILNDKLPEPHSPVTDSFGAGLPKLYIQEEGD
EPIRSSVFSSINDTSTQEADPSALVRPHLSKPDHSPSPAPSPPPPHVSSPSPNSSTHSTS
LHLSPPSSPVPLSLVQTPPSSPQPFSSSPAPLPASEEKPSSSCCSPPPFFLTSLPASPHP
HFPSSYIHPPPPPSSSSFSSSPPARSLSPPIPSSHPPFYPSRQPLLPTIPASPPSSPVPL
SERTTSPTIPLSSPVPPSERTTSPTIPLSSTVPLSERTTSPTIPLSSPVPPSERTTSPTI
PLSSPVPLSERTTSPTIPLSSPVPPSERTTSPTIPLSSPVPPSERTTSPTIPLSSPVPLS
ERTTSPTSSPVPPSERTTSPTIPQSTPPFVTPPSISASPPPLIPPPALSSPQSSSVPLSR
TPPRSPPLSTPPLSPRSQPRSHHIKTLYSHAAVVDGKPPLSPISTRRRCLSPSVSSSRVR
RRMMQDSLHGAGEPFQAVYNYVPRNEDELELREGDVVDVVEKCDDGWFVGTSRRSRLFGT
FPGNYVKTL
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaggtagtgaaagtcatttgtcagattctgatggttggcggtctcgcagtgtg
acagacagattgaggaatggcgatacgagcagctccactctgacagctaaaggttaccgg
agcgttcgtcccaacctgcaggacaacagcagtcccgtcccggtcccgctgccgccccct
cggagagagagctatcacatgacccctaaccctccaccttatagctcgcttgttccctcc
ggttcttacgccgtcaaatccagctcctcgtcctcctactcgtattctgagactactcgc
gctaccagcaccggctcagatatctccccagaggctaatgctaatgctaatgctaataac
tttattagccagctcctggagcgaaaggtgtcctctctcaaatttgctaacgaaggatcc
aacgcagtcgctgctaatgctaaaaccagtgcaggtgtaaccaacagtactaacatgaat
caattatgggctaacactaacatggcaaaggtcatgaaccctggttcacctgatagtcca
ccatccccaccactacgtacacactccaaatcccctgctacaacacacacagcctctctc
tccattcggatagcccctaaaggttcggaataccatcctgaatctggactccagtcggga
ttcggatccgtaaggcaggatcctgctgggccaagccccaaagtgccacctagaccagcg
ggcgatgtggtgcgtgacgtatccccaccaagaggtaccgccgacttcgtttgtgggtca
tcctacagctgtacaagtcaggactcacctgacttcctgtccgggccgaacgcttcgtca
ccatctctttcggccctgagccactattcatcatcaacagccgtcctcgaagaactgcag
atctgcgctgtggactcggccgaggccacgcccaccccctcccccacactcagccacgcc
tctgttacccatgatgatgtccctccacccactgcttcagcaacggctgctgatactaac
ggtcaaatggcggtaaatggaagcgcgcactcacagaggccattctctcctccagcacaa
cgtcctcctccaccggtctttagtcccggactcgagcacttccagcagatgagacactcg
gaaggttcagagtcagtacagagggagtcggtgtcagtgggtgagacgtcgttcagcagc
gtgactcctgtggctcgtttctcagaggaggaaaagaaagtttcagtgatcaaagcacct
cattacgagggcatcgggcctgtggaccagtcgggcctccccctcgctattcgcacgact
gtagacaggcctaaggactggtacaagaccatgtttaagcaaatccatatggttcataaa
gcagatgatgactatgcagacacatacggtgctacctacgctgttgtgaataacgagaac
ttcgaccccgtccacgcccacccgccacctcggacacacacgtaccggcctctgtcccaa
aaccccaacgagcccggcagagctccgcccccgcgagattccagccctgtcccgcctccg
cccccgcccatgccttcgctcctgcagctgcgctcgcaagacctcgaccgcgagaaagag
catccgcacgatccaaatgaatggagtcccccagatcgtaaagtggacacacggcggtat
cgcgccgagccacgtagtatcttcgagtacgaaccgggcaaatcctccatcctggagcac
gagagaccgagtttcgatttagaagcagatgagatagatttagagaacgagccgtggttt
aagttcttttcagagctggagtttggccggccgcctcctaaaaagaggctggattacacg
cctgactgctccacccactcccgcgcccagacctctctctatctctcatcctccgagcgg
cctgagagtgcctccagtgactacaggaagagacggaagtcggagccgtttgtcactcag
cagagcacaggaaatgagcagaatgctggtccagtctcgaaactcgagccctataaatcc
agcagtctgaagaaacctaccgtacgttcctcgccttcctctccagcaaaagcaaaagat
cagggctctgatgctggtcgcctcacgcctcagatcagaaaaccaactccagatcgagag
agacagtctgccagggcgatttacgattttaaagctcagaccagcaaagagctctctttt
aagaagggcgatgcgatcaacatcgtcagacagatcgacagcaactggtatgaaggagag
cacagaggacgcatcgggatattccctatttcttacgtcgagaaagtcgtgtctccggag
aggaagcagccggtgcgtcctcctcctccagcccagctccgggagatgggagaggccgtg
gctcgctacaacttcaacgccgacaccaacgtggagctttcactcaggaagggagagaga
gtgatcttgctgaggaaagttgataagaactggtatgaagggaggatccctggctccagt
aagcaggggattttccccgtctcatacgtcgatgtcatcaagggatccccttctaaaagt
cccggtcaccgtgtagacacctacagggtgcagaagccccatcctgcttcccttggctcc
gccccttacccccacctccaagaggtcaccagtgaatggttgtctctcactctgggcgtc
acagccttttccccttctccctgtagcacccctgtcccgcccactccaccaccccttccc
agcatcctccactgtcccagtacccccccacccactcctccaccgctcactcaagcacca
accacacttcagcactcctccatgatctcaaattcatctccgcctcctcctcttatggcc
ccacctcttctacacaaccccgcctctcttgtgacagaccactcccacttatttaacagc
ggaaatcattttccagccgcacagacaacacggttacaaaagaagctgagttcagatcag
aatcaagagctgtacatcgtagaagcagaggcgaccggacataaaacaccgaccgcagaa
cagcaacaaagccgagatctagcgacgctcataaccgatacaaacccctacgacaaaatt
ctgaccatgttccttggtaagcatttatcacaggaggcggaaaacatggagccttgcaca
ccactggctgacgagtcatctaaaacctgtgtgctagtgtcacctgataggttaactcta
aagaaaccatgccaagagcccgtgaggctgaccagccaatcagaaaatccacctgatgat
gaggggatatatggggaatggtcaagcatactgaatgacaaactcccagaacctcacagc
ccagtgacagacagctttggggcggggcttcctaagttgtacatacaggaagagggcgat
gagccaatcagatcttctgttttcagttctataaacgatacttcgacacaagaggccgat
ccctctgctcttgtcaggcctcatctctcaaagcctgatcactccccatcaccggcccct
tctcctcctcctcctcatgtgtcctccccctcccctaattcctccactcacagtacatcc
ctccatctttctcctccctcttctcctgtccccttgtcccttgtgcaaactcccccatcc
tcccctcaacccttctcctcatctcctgcccctttgcctgcatctgaggagaagccgtcc
tcgtcctgttgctcccctcctcccttttttcttacctcccttcccgcttctcctcatcct
cattttccatcatcttatatacaccctcctcctcctccttcttcctcctctttttcttcc
tctccccctgcccgctctctgtctcctcccatcccttcctctcatcctccattttaccca
tcacggcaacctctcctgcccaccatccctgcctctccaccgtcttctccagtccctctc
tcagagcgaaccacatctcccacaattcccctctcctctccagtccctccctcagagcga
accacatctcccacaattcccctttcctctacagtccctctctcagagcgaaccacatct
cccacaattcccctttcctctccagtccctccctcagagcgaaccacatctcccacaatt
cccctctcctctccagtccctctctcagagcgaaccacatctcccacaattcccctctcc
tctccagtccctccctcagagcgaaccacatctcccacaattcccctctcctctccagtc
cctccctcagagcgaaccacatctcccacaattcccctttcctctccagtccctttgtca
gagcgaaccacatctcccacatcctctccagtccctccctcagagcgaaccacatctccc
acaattccccagtccaccccccctttcgtcactcctccctccatcagtgcgtctcctcca
cctttgattcctcctcctgccctttcctcccctcagtcctccagtgtccccttgtcccgc
actcctccacgttctcctcctctctccactccaccactgtcccccaggtcacagccgcgt
tctcatcacatcaagacgctttatagtcatgcagcggtggttgatgggaagccgccgctc
agccctatttccaccaggaggcgctgtttatcgccctctgtttcctccagtagagtacgc
aggagaatgatgcaggattcactccatggagccggagagccgttccaggccgtgtataac
tacgtgccccggaacgaagacgagctggagctgcgagagggtgatgtggtcgacgtggtg
gagaagtgcgatgatggctggttcgtaggaacgtctcggaggagccggctgttcggaacg
ttcccaggaaactacgttaagactctttaa
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