Ictalurus punctatus (channel catfish): 108260768 Help Entry 108260768         CDS       T04658                                  Name (RefSeq) collagen alpha-1(IX) chain   KO K08131   collagen type IX alpha Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu04510   Focal adhesion ipu04512   ECM-receptor interaction ipu04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ipu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     108260768  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     108260768   09142 Cell motility    04820 Cytoskeleton in muscle cells     108260768  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:ipu00535]     108260768 Proteoglycans [BR:ipu00535]  Extracellular matrix (ECM) proteoglycans   Others    108260768 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  108260768 NCBI-ProteinID:  XP_017316793 Ensembl:  ENSIPUG00000006205 UniProt:  A0A2D0QDP4 LinkDB All DBs Position 29:complement(6309301..6348502) Genome browser AA seq 720 aa AA seqDB search MKLVLDCNRYDTVWQSYIHQTRVTGSGLSWSGLTKTSMSGAKGFSELLSVLLLGICLITS AQKYVGPSGPPGPAGVPGIDGIAGDRGEDGEDGSAGLDGAPGKPGSAGLPGLPGDDGLTG PTGDSGPDGPTGQKGEPGKPGPRGEAGIGPDGPLGPPGPGGLPGDLGKVGPPGAMGVRGP EGPRGPTGPRGAAGIQGRTMELCPNACPAGTPGYPGPPGMKGHKGVKGETGEPGKQGHMG EVGDQGVPGEVGSNGPTGPQGIQGATGIMGPKGEMGPRGNDGDSGTQGVAGATGDHGQRG LMGETGVGGEQGPQGQRGITGLPGPKGESGLPGVDGRDGIPGLPGVKGSPGKPGNPGEVG LQGLPGLPGVTGSKGAAGEKGNAGQLGLIGTMGSAGKPGERGEQGEVGPVGPTGGLGDRG EPGPPGPMGNPGSRGFKGDLGLPGLPGSPGILGEKGDRGDPGEFGSKGEKGEQGAEGTPG DKGNVGEPGEPGSTGATGNPGEPGNRGPEGARGQPGIDGPSGSPGPRGVQGNRGAPGPRG SQGPAGKGPGDQHIKQVCMRVMQEQLAQLAASLRRPESGAVGLPGRPGPPGPPGSPGDSG FPGQAGARGLPGLKGPTGTMGLKGPKGEIGDRGDRGQTVRGPKGMPGPPGLPGEHGKPGY GQDGHDGVSGLPGLPGQTGVHGSPGPIGPPGYCDPSACNLSIVTASQSLTNYDIKGPGGY NT seq 2163 nt NT seq  +upstreamnt  +downstreamnt atgaagctggttttggactgcaatcgatatgatacagtgtggcaaagctacatccaccaa accagagttactgggagtggacttagttggagtggcttgaccaagacgagcatgtctggt gctaaagggttcagcgagttgctctcagtgcttttgttggggatatgtcttatcacttca gctcagaagtatgtgggaccatctggcccaccaggccctgctggtgtcccaggaatcgac ggaattgctggcgacagaggtgaagatggagaagatggctctgcaggacttgatggtgct ccagggaaacctggttctgctggacttcctggactgcctggagatgatggtttgactggt cccacaggagattcaggcccagatggccccactggacagaagggagagccagggaaacct ggacctcggggagaagctggtatcgggcctgatggacccctgggaccaccagggcctggt ggacttccaggtgacctcggtaaagttggccctccaggggccatgggtgtcagagggcca gaaggaccccgtggaccaacaggacctcgtggtgctgcaggcatacagggcaggacaatg gaactgtgccccaatgcatgtccagctggtacacctggctaccctggaccacctggcatg aaaggccacaaaggtgtgaagggagagactggagaacctggtaaacagggacacatggga gaagtgggagaccagggtgtccctggagaggttggatccaatggcccaacaggtccacag ggaattcaaggtgctacaggaattatgggtcccaaaggggagatgggacctcggggtaat gatggggattcaggtactcagggggttgcaggagccactggtgatcatggccagaggggg ttaatgggagagactggtgttgggggagaacaaggaccccaaggacaaagaggtatcact ggtctgccagggcctaagggtgagagtggtttacctggtgtagatgggcgtgatggaatt cctggattacctggagttaagggcagccctgggaaacctggaaaccctggagaggttgga cttcaaggattacctggcttacctggtgttacaggatcaaagggagctgctggtgaaaag ggcaatgctggacagctaggccttattggaactatgggatctgctggaaagcctggagaa cgtggagaacagggagaagttggacctgtaggccctactggtggactgggagatagaggt gagccagggccacctggacctatggggaacccaggatccagaggatttaaaggtgatctt ggtctgcctggtcttcctggatccccaggcatacttggagagaaaggtgacaggggggac cctggagaattcggatctaaaggagaaaagggagaacaaggtgcagagggaacccctgga gacaaaggaaatgttggggagcctggagagcctggatctactggagcaactggtaatcca ggagaaccaggaaacagaggccctgagggtgcccgtgggcagcctggcatcgatggaccc tctggtagtcctggaccccgtggtgtacaggggaacagaggagctccaggtcctcgtggt tctcagggcccagcagggaaaggaccaggtgatcagcacatcaaacaagtttgtatgcga gtaatgcaggagcaactggcccagctagctgccagtttgaggaggccggagtctggtgct gttggtttgccaggcagacctgggccccctggtcctccaggttccccaggagatagtggt ttccctggacaggctggtgcaagaggactccctggactcaaaggacctactggaacaatg ggtctcaaagggcctaaaggtgaaatcggagacagaggagatagaggccaaacagtacga ggtcctaaagggatgccaggaccacctggtttgccaggtgagcatggtaagccaggttat ggtcaagatggtcatgacggagtaagtggtttaccaggccttcctggacagactggtgtt catggatctcctggccctattggacctcctggttactgtgacccatcagcatgtaacttg agcatagttactgcttcccagtccctcacaaactatgacattaaagggccgggtggttac tga

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