Ictalurus punctatus (channel catfish): 108261067
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Entry
108261067 CDS
T04658
Name
(RefSeq) integrator complex subunit 2 isoform X1
KO
K13139
integrator complex subunit 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108261067
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
108261067
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Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS2
Motif
Other DBs
NCBI-GeneID:
108261067
NCBI-ProteinID:
XP_017317399
Ensembl:
ENSIPUG00000019153
UniProt:
W5U9S4
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Position
16:8654045..8750675
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AA seq
1221 aa
AA seq
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MTDGSGLHFVSPYAFEAIQKVDVIRLAALSDPELRLLLPCLVRMALCAPADQSNAWAQDK
KQILRLLSGVEAVNSIVALLSVDFHALEQDARKEQQLRHKAGGSNSESILVSQLQHGLAL
EFEHSDPLRRLRLVLSELLAIMNKVADPNREFFLKSSELFESPVYLEEVADVLCILQAEL
PSLLPVVDVAEALLHVRNGEWFLCLLVANVPDSFNEVCRGLIKSGERQDEESVGGRHRTE
ALRQLCQMNPSQAFNIRAMVVEECHLPGLGVALTLDYKAGSADKAVSPLVSYVSGLLLGT
NSKVRTWFGMFIRNGQQRKSQSSSVLWQMRRQLLLELVAILPCSHSTRVLNDTRLSPEMM
EGSSAYSSLREDHVVKGSSLLRLYCALMGIAGLRPTDEEAEQLLQLMTSRPPATPAGVRF
VSLSFCKLLAFPTLVSTPEQEQLMVMWLSWMIKEEEYFESAAGVSASFGEMLLLVAMYFH
TNQLSAIIELVCSTLGMKIAIKPSSLNKMKTIFTHEIFTEQVVTAHAVRVAVTSNLSANI
TGFLPIHCIHQLLKSRAFTKHKVSIKDWIFRQLCETTTPLHTQLLPLIDVYITSILTPAS
KAHPEATNQPITEQEILNVFEGRRWGAAGKGHVQYSITTQLLILYYILSYEEALLANSKA
LVLMQKKPKSYSATLMDQIPIKYLICQAQGLHQELGGLHSALLRLLATNYPHLCMVEDWI
CEEEVTGTVPLMRKMLLTSPSCKYSHAQLHKAFQNIRLSGHILLQILEYLTLLSAGDLIP
YAEALTTNMGLLLEDNICRRVLQTVNKLWMVLNTVMPRRLWVMTVNALQPSVKHLKKHCY
TQNDLLVDPLIVLRCDPRVLRCPPLMDIMLHILNGYLKASKAYLNAHLKETAEFERQNQT
ISNLGLAGQSDTPEVTREELKNALLAAQDSAAVQILLEVCLPSSQEEQQLSRTGPCLLRN
VQSASVLPEKEKGKAEALWAPCWSQKAEGQPVGAKEGGLLSDSREVQCLICSLLHQMFIA
DPNIAKLVHFQGYPQALLPLTVAGIPSMHICLDFIPELLAQPQLEKQIFAIQLLSHLCTQ
YALPKSLTVARLAISVMGTLLTILTRAKRFAFFMPTLPCLVSICWAFPPLYDDVASLLVQ
LGQVCAADVAAKACDIDPFIARLQYLREKPQNSLEPHVGLFKVAVPKRSAEELCGADPDV
QLCYCIEATFMDIISTSTQGL
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgacagacggttcaggactgcactttgtgagcccttatgcttttgaggccattcagaag
gtggatgtgattcgactggcagctctaagtgatccagagctgaggcttttgctgccgtgc
ctggtgagaatggcgctctgtgctcctgctgatcaaagcaatgcttgggctcaggataag
aagcagatcctgcgcctgctctctggtgtggaggcagtgaactctatagtggcactgctt
tcggtggacttccatgctctggagcaggatgccaggaaagagcagcagcttaggcataag
gcaggtgggtcaaacagtgagagtatcctagtctctcagttacagcatggtctagccctg
gagtttgaacacagtgaccctcttaggagacttagactggttctcagtgagctgctggcc
atcatgaacaaggtagctgaccccaatagggagttttttctcaagtcatctgaactattt
gaaagtccagtgtacttggaggaggttgcggacgttctttgcatccttcaagcagagctg
ccctctttattgccagtcgtagatgttgctgaggccttactgcatgtgcgaaatggggag
tggtttctttgcctccttgttgccaatgtccctgacagcttcaacgaagtatgtcgtggt
cttataaagagtggtgaaaggcaagatgaggagagtgtgggtgggagacacaggactgag
gctctaaggcagctgtgccagatgaacccatctcaagcttttaacatcagagccatggtg
gtggaggagtgtcacctgccaggtttaggggtggctctgactttagattataaggcaggc
agtgcagacaaggctgttagtcctttagtgtcttatgtcagtggtctactcctcggcaca
aacagcaaagtgcgcacatggtttggcatgttcatccgcaatgggcaacagagaaagagt
cagagtagttcagttttgtggcaaatgcggaggcagctgctgttggaactggtagccatc
ttgccttgctcacacagtacacgtgtactcaatgacacaaggctcagtcctgaaatgatg
gagggcagctcagcatactcaagtctgagagaggatcatgtggtgaaaggcagttcattg
ctcagactttactgcgctctcatgggtatcgctggcctcagacccacagatgaggaggct
gagcagctactccagctgatgaccagccgcccccctgctacgcctgctggagtccgtttt
gtctctttgtcattttgcaaattacttgccttccctacacttgtcagtacaccagaacaa
gagcagctgatggtgatgtggctcagttggatgattaaggaggaagaatactttgaaagt
gctgctggtgtttctgcttcttttggagagatgctattgcttgttgctatgtatttccat
accaaccagctcagtgccatcattgagctagtctgttccacactaggaatgaagattgcc
attaagcccagctctctgaacaaaatgaagaccatatttacccatgagatcttcactgag
caggtggttactgcccatgcggtgagagtggctgtcaccagtaacctgagtgccaatatt
actggcttcttacccatccactgtattcaccagctcctcaaaagcagggctttcaccaag
cacaaagtctccatcaaggattggatctttaggcagctgtgtgagaccaccacacctctt
cacactcaactccttcctctcattgatgtttacattacttccattcttacgcctgcctct
aaggcccacccagaggctaccaaccaaccaatcacagaacaggagattcttaatgttttt
gagggccggagatggggagctgcaggaaaaggacatgttcaatatagcattaccactcag
cttctgattctctattatattctgtcttatgaagaggctctactggccaacagcaaagca
cttgtcttgatgcagaagaagccaaagtcctactctgctaccctgatggaccagatccct
atcaaatacctcatctgtcaggctcagggcttgcatcaagaattggggggactgcattct
gctctgctccgtctcttagccaccaactaccctcatctgtgcatggtggaagactggatc
tgtgaggaggaggtgactggcactgttcccctcatgcgcaagatgttgctcaccagccca
tcatgcaagtactcacatgcccagttgcacaaggccttccagaatataagactcagtggg
cacatactgctgcagatcctggagtatttgacattactgagtgcaggggatctgatcccc
tatgcggaggccctgaccactaacatgggcctgctgctagaggacaacatatgccgcaga
gtgctgcagactgttaacaagctctggatggtactcaatacagtcatgcctcgaaggttg
tgggtgatgacagtaaatgccttgcagccatctgttaagcacctcaagaagcattgctac
actcaaaatgacctgttagtggaccctctaattgtattacgatgtgaccccagagtgtta
aggtgtcctcccctgatggatatcatgttacacatattgaacggctatttgaaggcatcc
aaggcctacttgaacgcccacctgaaggagactgccgaatttgagaggcagaatcaaact
atctcaaacctggggcttgctggtcagtcagatacaccagaggtcacaagggaggagcta
aaaaatgctctactggctgcacaggacagtgcagcagtgcagatcttgttggaggtgtgt
ctgccctcctctcaggaggagcaacaactaagcagaacaggcccctgtttactaaggaat
gtacagtctgcttcagttcttcctgaaaaggagaaaggaaaagcagaagccctgtgggca
ccctgctggtcacagaaggccgaaggccaaccagtgggggctaaagagggtggattactc
agtgacagcagggaagtacagtgcctcatttgctctctgctgcaccagatgtttattgca
gatcccaacatcgccaaactagtgcacttccagggttatcctcaggctctacttcctctg
actgtagctggcattccttccatgcacatctgtttggactttattcctgagctgttggca
cagcctcagcttgagaagcagatctttgcgatccagcttctgtctcacctttgcacacag
tacgctctgcctaaatccctcactgtggcacgcctggctatcagcgttatgggtactctg
ctcacaatcctaacacgtgccaagcgctttgctttcttcatgcccaccttaccatgtttg
gtgtccatttgctgggcttttcctccactctacgatgatgtggcatccctgttggtgcaa
ctgggccaggtgtgtgctgctgatgttgctgctaaagcctgtgacatcgacccatttatt
gctagactacagtatttgagggagaagccacagaattcactggagccacatgtgggattg
ttcaaagtggctgtgcctaagagatctgcggaagaactgtgtggagctgacccagatgtc
cagctgtgttactgtatagaagctaccttcatggacataattagcaccagtacccaggga
ttgtaa
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