Ictalurus punctatus (channel catfish): 108264638
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Entry
108264638 CDS
T04658
Name
(RefSeq) zinc finger CCCH domain-containing protein 18
KO
K13092
nuclear protein NHN1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108264638
Spliceosome [BR:
ipu03041
]
Common components
Common spliceosomal components
General mRNP proteins
108264638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
108264638
NCBI-ProteinID:
XP_017321855
Ensembl:
ENSIPUG00000018811
UniProt:
W5UK10
LinkDB
All DBs
Position
4:complement(11633456..11674066)
Genome browser
AA seq
1115 aa
AA seq
DB search
MDTPESPTQSPQSPDEEEKGFSDSELLESPESPAEDGNGVSDSELLNDGEEGDADSDFDD
DEQVELIGGAQEDISDLEDDRMDRGGRVHLQESALLECRQRMSRSAEPEGEEEILETPRS
PDPDSPEPELDRPFTPADGEQEDVRQEDEDDGAEVTARSSLCGQDLDEEDDDEEERRQRR
LMVVSDLKQDSPSVSRDLDEHELDYDEEVPEEPSTAAPEEEDTEKGPATEDGDEDEEEKD
EEDKKRKKERKLILPPDAQCKKSEVPRGQEGGRRESFRDKKKDEDDGEIDEGEIDDDDLE
EGEVKDPTDRKIRPRPICRFFMKGNCTWGMICRFIHPGVNDKGNYSLISKPDPFSPNGAP
PGGGGPHPLMPSNPWTGPPVEELPPPPLPAEPPVESAWERGLRHAKEVLKKATIRKEQEP
DFEEKRFNVTIGEDEWEFDKENDFFRERGYRITREIRDPGEVEFRDPVYGDPYGDPYYDY
EMEAFWRGGQYENFRVQYTETPLPYHYSDRERDPRERHRERERERDHRERERRQRERERE
REREREKERLRKKEEWERDRLKRDEKEGRPRERPLREPREKKEEKDKPLKPRSPISMPPR
GPMELQPKKETVPMVKRPDEWKDPWRRSKSPRRRPGLMGSPTRGRRRHRPSGSSVSLSNT
SRSSSRSSSYTGSGSSRSRSRSSSLSSYSTHSSQHSSFTGSRSRSRSYSSSPSPTPSAQR
NAGKNKAEQPPGPVKGHPLKPGTLPPPRRDKGPSKKMPSPSLPGKPLKTTVEGVKPPNLR
DMGRPAAPREPAKPPTVREGRRKDRQPQDPRRRTLSGSVSGSCSSFSGSSSHSRSRSSSA
SHSRSQSGSHKSRSLSVSSVSSVSSASSSSSSVRSADSDDMYADLASPVSSASSHSPTPG
HTRKERGLPRDRDANKDRGKPTKKDETFKDERNERKRVDQSGIPPKADSGMPRSAPGNRG
HPMNAPPMGPAGGYGSHKDIKLTLLNKQQADRSNRKRYFPADKDRPTSPLNKRMALSPDR
GRDRRPGRSPLSPRMDRPRGQGPRPMPPQGDRKRPQSPPPKSSGKGLAASAGKSPAPAPG
SGKPSSTLSRREELLKQLKAVEDAIARKRAKIPGK
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggatacccctgagagccccactcagtctccacaatcccctgatgaggaggaaaaaggc
ttctctgacagtgaacttctggagtcgccggagtcccctgcagaggacggcaacggggtt
tctgatagcgagttactgaatgatggagaagaaggagacgcagactccgattttgatgat
gatgagcaggttgagttgattggtggggctcaagaggacatttctgatctagaagatgac
agaatggatagaggtggaagggtccacctgcaggagagtgccctcctggaatgccggcaa
cgcatgagccgatcagctgaaccagaaggagaggaagagatcctggagacacccagatca
ccagaccctgattcgccagagccagagctggaccggccgttcacccctgctgatggagag
caggaagatgtcaggcaggaagatgaggatgatggagcagaggtgaccgccaggtccagc
ttgtgtggccaagatctagatgaagaggacgatgatgaagaggaaaggagacaaaggagg
ctcatggtagtcagcgatctgaagcaggattcgccctccgtgtccagagatttggacgag
catgagcttgactatgacgaggaagtgccagaggagcctagcacagccgcgccagaggaa
gaggatacggagaaggggcctgccacagaggatggggatgaagatgaggaggaaaaagat
gaggaggataagaagagaaagaaggagaggaaactgatcttgcctcctgatgctcagtgt
aaaaaatctgaagtgccaagaggacaagaggggggtaggagggagtcttttcgtgataaa
aagaaagatgaagatgatggcgagattgatgaaggagagattgacgacgatgatcttgag
gaaggtgaagtaaaggaccccacagacagaaaaatcagacccagacctatatgcaggttc
tttatgaaaggtaactgcacttggggcatgatctgtagatttatccacccaggagtcaac
gacaaaggcaactactccctcatctccaagccagaccccttttctccaaacggagctcct
cctggaggcggaggccctcacccactcatgccctccaacccctggaccggtcctcctgtt
gaggagttgcctcctccccctctgcctgcagagcctcctgtggagagtgcctgggaaaga
ggtctccgacatgccaaagaggtattaaagaaagccacaatacgcaaagaacaggagcct
gactttgaggaaaaacgcttcaatgttaccattggtgaagatgaatgggaattcgacaaa
gaaaacgacttcttcagggaacgaggctatcgcattaccagggaaatcagagatcctggt
gaagtggaattccgagaccctgtatatggtgacccatatggtgatccttattatgactat
gaaatggaggctttctggagaggtggccagtatgagaactttagagtgcagtacacagag
acccctctgccataccactacagtgatcgagagagagatccccgtgagcggcacagagag
agggagcgtgagcgagaccaccgcgagcgagagcgcaggcagagggagcgagagcgggag
cgagagcgggagcgtgaaaaagagcggttacgtaaaaaggaagagtgggagcgagaccga
ctgaaacgtgatgagaaagaagggagacccagagagcggccgttaagggaaccacgtgag
aagaaagaagaaaaggacaagcctcttaaacctcgttcgcctatcagtatgccacccaga
gggccaatggagttgcagccaaagaaagagacagtgcccatggtgaaacggccagatgaa
tggaaggacccctggcgcaggtcaaagtctccgagacgaagacctggcctcatggggtct
ccaacccgcggacgcaggcggcataggccctcaggctcatctgtgtcactctctaacaca
tcgcgatcatcatcgcggtcttcatcatacacaggttccggttcctctcgctcaaggtca
cggtcttcatctctcagctcttattccacccactcctcccaacatagctcttttacaggc
agccgttccagatcgagatcctactcatcatctccctcccctacaccttccgcccagaga
aatgcaggcaagaataaagcagagcagcctcctggaccagtgaagggccacccgctgaag
ccaggtacactgcccccccctcgcagggacaagggcccctccaagaagatgcccagtccc
tcattgccaggcaaacctctgaaaactacagtggaaggagttaaaccccccaacctccgt
gatatgggcagaccagctgcaccaagagaaccggcaaaaccacccactgtgagggagggc
cgcaggaaagaccgacagccacaggatcctcgcaggaggacattaagtggtagtgtgagt
ggcagctgcagcagtttttcaggctctagctctcactccaggtctcgatcctcttccgcc
tctcattctcgctctcagtctggatcccacaagtccaggtctctgtcagtgagcagtgtg
tcatcagtgtcatctgcctcttccagcagcagctcagtgcgcagtgctgattctgatgat
atgtatgctgacctggccagccctgtgtcctcagctagctcccattcacccactccaggt
cacacacgcaaggaaagaggactcccacgagacagggatgccaataaagacagaggaaag
cccacaaagaaagatgagacctttaaagatgaaaggaatgaaaggaaaagggttgatcag
tctggcatcccacccaaagctgactcgggcatgcctagatctgcgcctggaaaccgaggg
cacccgatgaacgcaccacctatgggtcctgcaggggggtatggttcacataaggacatc
aaactcaccttactcaacaagcaacaagcagacagaagcaatagaaaaaggtacttccct
gcagacaaagacagaccaacatctcctctcaacaagagaatggcactgtctcctgataga
ggtcgagacaggaggcctggacgttccccactttcacctagaatggaccggccaagaggt
cagggcccacggcctatgcctccacagggagacaggaagcgtccccaatccccaccaccc
aagtcttctgggaaaggtcttgcagcatcagctggtaaatctccagcccctgcaccaggc
tcaggcaaacccagcagcactctctcccgccgtgaggagctgctgaagcagttgaaggcc
gtggaagatgccatcgcccgcaaaagggctaaaatcccggggaagtga
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integrated database retrieval system
