Ictalurus punctatus (channel catfish): 108264838
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Entry
108264838 CDS
T04658
Symbol
si:ch211-1e14.1
Name
(RefSeq) UPF0606 protein KIAA1549 isoform X2
Organism
ipu
Ictalurus punctatus (channel catfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KIAA1549
DUF2681
Motif
Other DBs
NCBI-GeneID:
108264838
NCBI-ProteinID:
XP_047008705
Ensembl:
ENSIPUG00000014748
UniProt:
A0A979EJX3
LinkDB
All DBs
Position
4:8237070..8292306
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AA seq
1724 aa
AA seq
DB search
MEAVTRAAALTAQSRGWRVVSLCLITLVSMATSYLPAQDRSLLDSNTTKQSLMEVPHQTA
SPITLLYTSFEAWGQSSDIHRTFPILPNTESPKASENYYSHTIGTVYGSASMPPPSYIPN
PEPLSGPAVHSGIQLSQTSPNLPSTGLDSFAEPPFPPPELPAERFSNSDTTSANQEELSN
HLVPSHDLNIQNDGTLDAHLLYPSHAVFGKYHLTSSFTEPTMGPPEVFFPANTMDVDYGS
GSGDYLETMSYMGTEGDDYSLVTNFPSDMYDFEDSNSESYDTSFPTRVMIPLSTRYLSPS
TSTNVPDRHLTMNPNMAFSITPNSTSTLQVTNSKMTVSQSVMTSRTPTLTSIPNSPTHMP
FSSTVYLGVQAIHPTAVHSSASLHRSNIVSDTSESYSNWPDVTIEPSDVLLPDMNSLEYY
NIQLTKNNDSLTGQQGNQTTSKHFSLSLSVSTTSTYTVPPSHMITVMYGEDLQPMGNNSW
PEESSTDISGFDLSNTTVLDLSDIRPSLMNGTFPFLYSSVLTPSMDFSTSLWDLATTANW
ISTESVSTSLSLFFPPSDSEESDVMFPTSTNVYSTLPETSLPTSSVISNVFTQTHNASEV
PTESTLNSTSAISVTEMADQGFTGVESSFTEVTDDVMTTTSKPAVSTTSVLYNETTVTTP
GPTTEVFNTTTLTMPTTPSVTTQTSTLQTTTVREYLCNNTKPDTYLVRVGFPLGSTAGYA
KTKVGEILKAEFNRSVELQVVKSPPDFVFRAVSGPVVYTAISVMNALRRFTYTSDTILSV
SPISPVPGQQYHIHSVLQFVPIGIDMHVCTFIEHIERGLIYAFAEVRRRLKESTDFTVHI
LNITMSSVAPTRRQLRGPVDITFVVRDAQGYILGSEVSGHLRHLSMVEFSYYLGYPVQQI
AEPFHYPELNTTQLLRSSWVKTVLLGVMENDVSGRIFQAKMERRLALLLGEGLSAGRRLK
RATSMGNNSVQIVQITRLPEPDDPLEMIYFVEGANGERLPAVTTADLLNRLDVQHAAILL
GYRIQGILAQPVEKQASLPSETENTNTWIIVGVVVPVLVVMIIISILYWKLCRTDKLEFQ
PDTMSTVQQRQKKPISTATSSKKQECMKEEEEEAVKEDEPKKAIKEKLKEGVEIAELQTP
SVKGFDFAKLHLGQHSKDDLRVIQEPLPAPAPAKEPSANENTEASTPKSKGSSTKASRNS
QHRRGQISPSDGDSLGSEPFSERESPKANPRLSSDPKQPRKMAPNGLNGPPPLNGADEQV
SSASIFEHVDRMSRSSDGANKRFSSKIQLIAMQPMPALPLPCPATDTKAAVNTKMNKEIQ
VALRQKSEIEHHRNKIRLRAKRKGHYDFPAMDDLMDSLGDAKEQDRIYQKAQMQIDKILD
PDSRVPPLYTEPRKSGREKRSPKQRKKQQMNGDLTDADRDRLITNDSDGTYKKYPGVNNV
AYVSDPDQGPEAQSPSPTDDVFLSSVSPPAGHTAPPPPYLPPQPSIEEARQQMHSLLDDA
FALVSPSSQAANAGITLPGLGVRSEHTALSSPPSRGPRPCGPSYPALSPFSGRYSDLGLP
PSTVQGLMHRPGLGCGYPQGEGVSGEQMQSEGLYNSRGGYIDEPPSSARPRPVGGTTGAQ
LHHMTQVNLSGRVNEGRQPGALNWGPYHEEDFRPVNRDPSPRSGMREPSAPPAHLDTVGL
GFSPSAPPEDSVPPSHSSASLIKAIREELMRLSQKQAAPTGYHS
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtgacgcgtgcagctgctctgacggcgcaaagccgaggatggcgcgttgtc
tctctgtgcttgataacgctggtctccatggcgacctcatacctcccagctcaagaccgg
tctttgttggattccaacacaacaaagcaatctctgatggaagtgccacatcaaacagct
tcacccatcaccttactgtatacttccttcgaagcctggggacagtccagtgacatccat
aggacattccccatcttgcctaacactgaatcacccaaagcctcagagaattactacagt
cacaccatcggcactgtatatggctcagcttccatgccacctccaagctatatccctaat
ccagagcctctctctggccctgcagtacattcaggcatccagctctcacagacgtcacca
aatttgccttcaactgggctggattcttttgcagaaccaccgtttccaccccctgaatta
ccagcagaaagatttagcaatagtgacactacatctgcaaaccaagaagaactttcaaat
catttagtccctagtcatgacttaaatatccaaaatgatggtaccctagatgctcatctg
ttatatccaagtcatgctgtttttggaaaatatcatttgacatcatctttcacagaacca
actatgggtccaccagaggtcttcttcccagccaacactatggatgtggactatggttct
ggttctggtgattacttggaaacaatgtcttacatgggaactgagggagatgactattcg
ttggtcaccaattttccctccgacatgtatgactttgaggactcaaactccgaatcctac
gatacatctttccctacaagggtaatgattcctttgtccacaaggtacctctctcccagt
acctccacaaatgttcctgatagacatcttactatgaatcctaacatggccttcagtatt
accccaaattcaaccagtactctccaagtaaccaatagcaaaatgacagtttctcaaagt
gtaatgacctccagaacccctaccctaaccagtattcccaacagtccgacccatatgcca
ttttccagcactgtttacttgggtgtccaagccatccatcctacagcagtgcattctagt
gcctccttacatcggagcaacatagtcagtgacacttcagagtcatattctaactggcct
gatgttaccattgaacccagtgatgttcttctgcctgatatgaatagtctggagtactac
aacattcaactgacaaagaataatgacagcttgacaggacaacagggcaaccagaccact
tccaaacatttctccctctccctgtcagtaagcactaccagcacctacactgttcctccc
agtcacatgataacagtaatgtatggagaggacctgcagcctatgggcaacaactcctgg
cctgaagaatcttctacagacatctcaggatttgatttgtccaacactactgtcttggat
ttgtcagacataagacctagtctaatgaatggtacatttccgtttttgtactcatcagtg
ttaactccttccatggacttttcaacttccctgtgggatctggccacgactgctaactgg
attagcacagaatctgtcagcacctccctgtcactgtttttcccaccctctgattcagag
gaatccgatgtcatgtttccgacgtccacaaacgtctactctacattgccagagacctca
ctccctacttcttcagtcatcagtaatgtgttcacccagacacataatgcctctgaggtg
cctactgagtcaaccctcaatagcacttctgccatttctgtgaccgagatggctgaccaa
ggtttcacaggagtagagagttctttcactgaagttaccgatgatgtaatgacaacaacc
agcaagccagcagtctccaccacttcagtattatataatgagacaactgtgactaccccg
ggcccaacaactgaagtgtttaatactacaactcttacaatgcctacaaccccttcagtg
acaacccagacttctactcttcagactaccactgtccgagagtacctctgcaacaatacc
aaacctgatacctacttagtgcgagtcggttttccgcttggctccaccgctggttacgcc
aaaacaaaagtcggagagatcctcaaagcggaattcaatcgatcggttgaactgcaggtg
gtgaaatcccctccagactttgtgtttcgggctgtgtctggtcctgttgtctacacagcc
atatcagttatgaacgctctgagacggtttacatacacgtctgacaccattcttagtgtt
tcccctatcagtcctgtaccaggccaacagtaccacatccattctgtgcttcagtttgtg
cctattggcattgacatgcatgtgtgcacattcatcgagcacattgaaagaggcctgatt
tacgctttcgccgaggtgcgccgtcgcttaaaggagtctactgactttaccgtgcacatc
ttgaacatcaccatgagctctgtggcaccaacacggaggcagcttcgtgggccagtggac
atcacctttgtggtacgtgatgctcaagggtacatactagggtcagaggtcagcggtcac
ttgagacatctcagtatggtggagtttagctactacctgggataccctgttcagcagatt
gcagaaccatttcactaccctgaactgaacaccacacagttgctacgctcttcatgggtg
aagacagtgttgctgggcgtgatggagaatgatgtgagtggtagaattttccaggcaaag
atggagaggagactagctctgctgcttggagaggggctttctgcaggccgacgccttaaa
agagccaccagtatgggcaacaacagcgtacagattgtgcagatcactcgtctaccagaa
ccggatgaccctctggagatgatctactttgtggaaggtgctaacggtgaaaggctgcct
gctgtcaccaccgcagacctgctgaacagactggatgtgcagcatgcggccatcttgctg
ggataccgcatccagggaattctggcgcagcctgtggagaagcaggcatcattgccgtct
gagacagagaataccaacacatggattatagtaggagtggtggtgccagtactggtggtg
atgatcatcataagcatactgtactggaaactctgccgcacggacaagctggagttccag
ccagacaccatgagcactgtccaacagaggcagaagaagcctatctctactgccacaagc
agtaagaaacaagaatgtatgaaagaggaggaagaggaagcggtaaaggaagacgagccg
aaaaaagcgatcaaggaaaagttgaaagaaggagtggaaatagcagagctgcagactccc
agtgtgaagggctttgactttgccaagctacacttgggccagcacagtaaggatgacctc
agggtgatccaagaacctttaccagccccagcgccagctaaagagccgagtgccaacgag
aacacagaagcgtccacacccaaatccaaaggctcctccactaaggcctcccgtaacagc
cagcacaggaggggacagatctctccttccgacggtgattcgttgggaagcgagccattc
agtgagagggagtctccgaaggcaaacccgagactgtccagcgatcccaagcaacctcgt
aagatggccccgaacggattaaacggtcctcctccactgaatggtgcagatgagcaggta
tcatcagcctccatttttgagcacgtggaccggatgtcccgctcatcggatggcgccaac
aagcgcttctccagcaagatccagctgattgccatgcagcccatgcctgctctgccctta
ccctgccctgcaaccgataccaaggctgctgtcaacaccaagatgaacaaggagatccag
gttgctctgaggcaaaagtctgagattgagcaccatcgcaataagatccgtctcagggct
aagaggaagggccactatgacttccccgccatggatgatctcatggacagcctgggggat
gcaaaagagcaggaccgcatctaccagaaggctcagatgcagattgataagatcctggac
ccggatagccgcgtgccccccctctacaccgagcccaggaaaagtggcagagaaaagcgt
tctcccaagcagagaaaaaagcagcagatgaatggagatctgacagacgcagacagagac
agacttatcactaatgacagtgacggcacatacaagaaatacccaggagtcaacaatgta
gcatatgtgtcggatcctgaccagggccccgaagctcaaagtccatccccgactgatgat
gtctttctgagctcggtgtcgcccccagcaggccacaccgcccctcctccaccctacctg
ccccctcagccatctatagaggaggcccggcagcaaatgcactcgctgcttgatgatgct
tttgccctggtgtccccctcttcacaggccgccaatgcgggcatcacactgcctgggttg
ggtgtcaggagtgaacacacagctctttccagccctccgtcacgtggcccacgaccctgt
gggccttcataccctgcgctcagccccttctctgggagatattccgacttaggcctgcca
ccttcgacagtacaaggcttaatgcacaggccgggtttgggatgtggttaccctcaagga
gaaggagtcagcggagagcagatgcagtctgagggactctacaacagcagagggggctat
attgatgaaccgccttcttctgctaggcctcggccagtagggggcacaacaggtgctcag
ttacaccacatgacacaggtgaatttgtcaggtcgtgtgaatgaaggcaggcaacccggt
gccttaaactgggggccttatcatgaagaggacttcagacctgtgaacagagatcctagc
cccaggagcggaatgagagagccgtccgccccccctgcccacctggacacagtgggcctg
ggcttctctccgtctgctcctcctgaggactccgttcccccgagccattcctctgcctcg
ctcatcaaagccatccgcgaggagctgatgcgcctttcccagaagcaagcggcccccacg
ggctaccacagctga
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