Ictalurus punctatus (channel catfish): 108265548
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Entry
108265548 CDS
T04658
Name
(RefSeq) nuclear receptor subfamily 2 group C member 2 isoform X1
KO
K08544
testicular receptor 4
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108265548
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ipu03310
]
108265548
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
108265548
Nuclear receptors [BR:
ipu03310
]
2. Hepatocyte nuclear factor 4 like
2C. Testicular receptor
108265548
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
108265548
NCBI-ProteinID:
XP_017323491
Ensembl:
ENSIPUG00000022437
UniProt:
A0A2D0R0E0
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Position
5:8150855..8172516
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AA seq
626 aa
AA seq
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MTTNLEMLAQQIVTTEQVAETQASPTDSPVMSASPQRIQIISTDSSVTAPQRIQIVTDQQ
TGQKIQIVTAVDPVSVPKQQFILAAHDGTPTGKVILASPNNPSTKQLIFTTADSLVPGRI
QFVTDAVSVERILGKGGEVGRPQPVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKSL
TYSCRSNQDCVVNKHHRNRCQFCRLRKCLEMGMKMESVQSERKPLDLPREKPVNCAASTE
KIYIRKDLRSPLIATPTFITDKDGTRSGLLDPGMLVNIQQPVIQADGTLLLATDTKTETS
HGDLGTLANVVTSLASLSESLNNGDGDISASQQEESVSEITRAFDTLAKALNPNEEGEGQ
SLSEAECVGGATIQVISRDQVTPLIEVEGPLLTDTHVNFKLTMPSPMPEYLNVHYICESA
SRLLFLSMHWARSIPAFLALGQECNTSLVRACWNELFTLGLAQCAQVMSLSTILAAIVNH
LQSSIHEDKLSGERVKLVMEHIWKLQEFCNSMAKLETDGYEYAYLKAIVLFSPDHPGLNS
SSQIEKFQEKAQMELQDYVQKTYPDDTYRLARTLMRLPALRLMSSSITEELFFTGLIGNV
PIDSIIPYILKMETADYNSQISGPTA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccaacctggagatgctggctcagcagatagtgaccactgagcaggtagccgag
acgcaggcatctcctacagacagtccggtgatgagtgcttctccacagcgcattcagatc
atctccactgactcctccgtcaccgcgccacagaggatacagattgtgacggatcagcag
acgggacagaagatccagattgtgacggctgtggatccggtcagcgtgcccaagcagcag
tttatcctggctgctcatgatggaacaccaacaggcaaagtcatcctggcgtcccccaac
aaccccagcactaaacagctcatcttcaccacagcagacagcctggtacctggtcgaata
cagtttgtcacagatgcagtctcggtagagaggattctgggtaaaggtggggaggtgggc
cgaccgcagcctgtcgagtactgcgttgtgtgtggagacaaagcctcggggaggcactat
ggagctgttagctgtgagggctgcaagggcttcttcaagcgaagtgtcaggaagagtctg
acctacagttgccgcagcaaccaagactgtgtagtcaacaagcaccaccgcaaccgctgc
cagttctgccgcctcaggaagtgccttgagatgggcatgaagatggagtctgtgcagagt
gagagaaagccattagacctgcccagagaaaaacctgttaactgtgctgcctcaactgag
aagatctacatccgaaaagatttgcgaagtcccctaatagcaacgccaactttcatcaca
gacaaagatggcacacgctctggtttattggaccccgggatgctggtgaacatccaacag
cctgttatccaagccgatggcacgttactcttagcaacagacaccaagacagagaccagt
catggggatttaggcacactggccaatgtggtgacatcattagccagtcttagcgaatca
ctcaataacggggacggggacatttcagccagccagcaggaggagtctgtcagtgaaatc
acacgtgcctttgacactctggccaaagcattaaaccctaatgaggagggggaggggcag
agcctgtcagaggcggagtgtgtgggtggagcaactatacaggtcatcagcagagatcag
gtcacgcctcttatagaagtggaaggccctctgctcacggacacacacgtcaactttaag
ctgacaatgcccagtccgatgcctgagtatctgaatgtccattatatttgcgagtctgcg
tcccgtctgctgtttctctccatgcactgggcacgctccatcccagccttcctagctctt
gggcaggagtgtaacacatctctggtacgggcatgctggaatgagttgttcactctcggt
ctggcgcagtgtgctcaggtcatgagcctctccaccatcctggctgccatcgtcaaccat
ctgcagagcagcatacatgaggacaagctgtctggggaacgagtgaagttggtgatggag
cacatctggaagctgcaggagttctgtaacagcatggccaagctggagacggacggctat
gagtatgcctacctgaaagccatcgtcctcttcagtccagaccacccaggcctgaacagc
agcagccagatcgagaagtttcaggagaaagcgcagatggagctgcaggattatgtacag
aagacttatccagatgacacttacagactggcgcgaaccctgatgcgtctgccagcactg
cgtctgatgagctccagcataacagaagaacttttcttcaccgggctgattggaaacgtg
cccattgacagcatcatcccgtacatcctcaaaatggagaccgccgactacaatagccaa
atcagtggtcctactgcatga
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