Ictalurus punctatus (channel catfish): 108265863
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Entry
108265863 CDS
T04658
Symbol
nr6a1a
Name
(RefSeq) nuclear receptor subfamily 6 group A member 1-A
KO
K08561
germ cell nuclear factor
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108265863 (nr6a1a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ipu03310
]
108265863 (nr6a1a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 germ cell nuclear factor
108265863 (nr6a1a)
Nuclear receptors [BR:
ipu03310
]
6. Germ cell nuclear factor
6A. Germ cell nuclear factor receptor
108265863 (nr6a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
108265863
NCBI-ProteinID:
XP_017324139
Ensembl:
ENSIPUG00000005941
UniProt:
A0A2D0R0R9
LinkDB
All DBs
Position
5:3691200..3718388
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AA seq
458 aa
AA seq
DB search
MTEWQERHEMDSWEVDDQAEQRSCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRC
SRDKNCEMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISDEEIERI
MSGQEFKDESNMAEHTWGNNGDSDHSSPGNGVSDGNQPSPASTLSSNRSVELNGYTAALR
EQYIGSAVAQHYQFLPHLFGYAAQPRSLYPQSHTLISQLVAAEELAPLGTPMLIEDGYRV
TQVELFALLCRLADELLFRQISWIKKLPFFCELSIEDYTRLLSATWQELILLACLTVYSA
QILGDLANVTDKYTPSDHELQGFSEDGMEVMEKLIYLFRKFHQLKVSNEEYACMKAINFL
NQDIRGLTNVAQLEQLNKRYWYVCQDYTEYKYPHQPKRFPEIMMCLPEIRCIAGKLVNVP
LEQLPLLFKAVLHSCKSSLNTYRSNHSPCATKGSAPAN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatggcaggagagacatgagatggattcatgggaagtagatgaccaggctgag
cagcgctcctgtctcatctgcggagaccgcgccaccggactgcactatggcattatttcc
tgcgagggctgcaagggcttcttcaagcgcagcatctgcaacaagcgcgtgtaccgctgc
agccgtgacaaaaactgcgagatgtcacgcaagcagcgcaaccgctgccagtactgccgc
ctgctcaagtgtctgcagatgggcatgaacaggaaagcgatcagagaggacggcatgccg
ggcgggaggaacaaaagcatcgggcccgttcagatctcagacgaggagatcgagcggatc
atgtctggtcaggaatttaaggatgagtccaacatggcagagcacacctggggcaacaat
ggtgacagcgatcacagttcccctggcaacggtgtctccgatggcaaccaaccctctccc
gcatccacactctcctccaatcgctcggtggagctgaacggctacacggccgccctcagg
gagcagtacatcggcagcgccgtagcccagcattaccagttcctgcctcacctgttcggc
tacgcggcgcagccccgcagtctgtacccacagagtcataccctcatcagccagctggtg
gcagcagaggaactggcaccactgggcactcccatgctcatcgaggacgggtaccgggtg
acccaggtggagctcttcgccctgctgtgccgcctggccgacgagctgctgttccgtcag
atctcgtggatcaagaagctgccgttcttctgcgagctctccatcgaggactacacacgg
ctgctgagcgccacgtggcaggagctcatcctgctcgcctgcctgaccgtctacagcgcc
cagatcctgggagacctggccaacgtcaccgacaagtacacgccgtccgatcacgagctg
caggggtttagcgaggatggcatggaggtgatggagaagctgatctatctgttccgtaag
ttccaccagctgaaggtcagcaatgaagagtacgcctgcatgaaggccatcaacttcctc
aaccaagatatccggggattgactaacgtggcacagttggagcagttgaataagcgttac
tggtacgtgtgtcaggactacactgagtacaaataccctcaccaacccaaacgcttcccg
gagatcatgatgtgtcttcctgaaatacgctgcatcgcagggaagttggtaaacgttcct
ttggagcagctccccctgctgttcaaggcggtcctgcactcctgtaagtccagcctgaac
acctacaggtcaaaccactccccctgcgcgacgaagggctccgcccctgccaactaa
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