KEGG   Ictalurus punctatus (channel catfish): 108265943
Entry
108265943         CDS       T04658                                 
Symbol
calr
Name
(RefSeq) calreticulin
  KO
K08057  calreticulin
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04141  Protein processing in endoplasmic reticulum
ipu04145  Phagosome
ipu04148  Efferocytosis
ipu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108265943 (calr)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108265943 (calr)
   04148 Efferocytosis
    108265943 (calr)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    108265943 (calr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ipu03110]
    108265943 (calr)
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:ipu04091]
    108265943 (calr)
Chaperones and folding catalysts [BR:ipu03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   108265943 (calr)
Lectins [BR:ipu04091]
 Calnexin / calreticulin
  108265943 (calr)
SSDB
Motif
Pfam: Calreticulin DDHD
Other DBs
NCBI-GeneID: 108265943
NCBI-ProteinID: XP_017324312
Ensembl: ENSIPUG00000001657
UniProt: A0A2D0R0Z0
LinkDB
Position
5:23514433..23522724
AA seq 421 aa
MTALCLLFISLSFALITAESSVYFREQFEDGDAWKSRWLESTHKSDYGKFVLSAGKFYGD
AEKDKGLQTSQDAHFYAISSRFEDFSNKDQPLVIQFTVKHEQGIDCGGGYIKLFPSDLKQ
EEMNGDSTYNIMFGPDICGPGTKKVHVIFNYKGKNHLINKDIRCKDDEYSHLYTLVVNPD
NTYEVKIDNKKVESGSLEDDWDFLPPKKIKDPDAKKPEDWDEREKIGDPDDKKPEDWDKP
ETIPDPDAKKPDDWDEEMDGEWEPPMVTNPDYKGEWKPKQIDNPAYKGKWVHPEIDNPEY
TPDSEIYKYSSIGVIGLDLWQVKSGTIFDNFLITNDPKLAEEVGNESWGATKDAEKKMKD
SQEEEERKKREEEDKKRSEEAKDEADEEDKDEEDEDEEDEEEEDEEDGEEEGTDSKLKDE
L
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgacagcgctctgtttgcttttcataagcttatcattcgccttaataaccgcagaatcg
tccgtttatttcagagagcagtttgaagacggggatgcttggaaaagccggtggctggaa
tccactcataaatccgactatggcaagtttgtgctctcggccggcaaattttatggcgat
gccgagaaagacaagggtcttcagaccagccaggatgctcacttttatgccatttcatct
cggtttgaggacttcagcaataaggaccagccactggtcatacagttcacagtgaaacat
gagcagggcatagactgtggaggaggctatattaagcttttcccatcagaccttaagcaa
gaggaaatgaatggagattccacatacaatataatgtttggtcctgatatctgtggccct
ggcactaaaaaggttcatgtcatcttcaattataagggcaagaatcatttgatcaacaaa
gacatcaggtgcaaggatgatgaatactcccacctgtacacacttgttgttaatcctgac
aacacgtatgaggtgaagattgacaataagaaggtggagtctggatctcttgaggatgat
tgggactttttgcccccgaagaagatcaaggatcccgatgcaaagaagcctgaagactgg
gacgagcgggagaaaatcggtgaccctgatgataaaaagccagaggactgggacaagcct
gaaaccatccctgatcctgatgccaaaaagcctgatgattgggacgaagagatggatgga
gaatgggagcctcccatggttaccaaccctgactacaagggtgaatggaagccaaaacag
attgacaatcctgcctacaaaggaaaatgggtgcaccctgaaattgacaaccctgaatac
actcctgattctgagatctacaaatacagcagcattggagtgattggattggacctgtgg
caggtgaagtctggcaccatttttgacaactttctcattaccaatgacccaaaactggct
gaggaggttggcaatgagtcttggggtgcaacaaaggatgctgaaaaaaagatgaaggat
agtcaagaggaggaagagaggaagaaacgtgaggaagaggacaagaaaagaagtgaagag
gcaaaggatgaagcagatgaagaagacaaagacgaggaggacgaagatgaggaagatgag
gaggaggaggatgaagaagatggagaggaggagggaacagactctaaacttaaggatgag
ttgtag

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