Ictalurus punctatus (channel catfish): 108265945
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Entry
108265945 CDS
T04658
Symbol
cxxc1a
Name
(RefSeq) CXXC-type zinc finger protein 1a
KO
K14960
COMPASS component SPP1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108265945 (cxxc1a)
03036 Chromosome and associated proteins [BR:
ipu03036
]
108265945 (cxxc1a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
108265945 (cxxc1a)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
108265945 (cxxc1a)
COMPASS/SET1 complex (yeast)
108265945 (cxxc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
108265945
NCBI-ProteinID:
XP_017324314
Ensembl:
ENSIPUG00000012610
UniProt:
W5ULG5
LinkDB
All DBs
Position
5:complement(31348749..31355420)
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AA seq
571 aa
AA seq
DB search
MDSETSEFELHSGPEMSTNQGNAPVYCICRKPDINCFMIGCDNCNEWFHGDCINISEKMA
KSIRVWYCEKCRSNDDSLETKFRSKKSRERESDGDDMDMDGQFENDTPDFKNDRRRGSRI
KRSARMCGECEPCMRTEDCALCDFCKDMKKFGGPNKIRQKCRLRQCEVRARKMLRVKEEE
LSMSKGQERFQSDYPLSDEYSENELELYQQYCAGKYADQGWNSDEDDGPYLDSTLRKRAV
KVKHVKRREKRSEKKKEENKPRKHKPKQKHRDKVRHSERTEARDGGEVRQCLGPGCVESA
RPNSKYCSDDCGMKLAANRIYEILPQRIQQWQQSPCIAEEQGKKLLERIRREQQLARTRL
KDMEERFHELEGIIAKAKQQVVQHDEEVNEGDDDTDLQIFCVSCSHPVNPKVALRHMERC
YSKYESQTSFGSMYPTRIEGATRLFCDVYNTQSKTYCKRLQVLCPEHSRDPKVPADEVCG
CPLVRDVFEPTGEYCRVSKRKCNKHYCWEKLRRAEVDLERVRVWYKLDELFEQERNVRIA
MTNRAGLLALMLHQTIQHDPHSTDLRANKNR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgagacttcagagtttgagctgcattcaggaccggagatgagcacaaaccag
ggcaacgctccagtttactgcatctgtcgcaaaccagacatcaactgcttcatgatcggt
tgtgacaactgcaatgagtggtttcatggcgactgcattaatatatccgagaagatggca
aaatccattagggtgtggtactgtgaaaaatgtcgcagtaacgacgattctttagagacc
aaatttcgttccaagaaaagccgggagagagagtcagacggagacgacatggatatggac
gggcagtttgagaacgacacgcctgattttaagaacgatcgcagacgtgggtcacggatt
aagcgctcggcgcgcatgtgcggggagtgtgagccctgcatgcggacagaggactgcgct
ctgtgtgacttctgtaaggacatgaagaagtttggtgggcccaacaagatcaggcagaag
tgcaggctccggcagtgtgaagtgcgcgcccggaaaatgctgcgtgtgaaggaagaggag
ttgtccatgtctaaaggccaagagcggttccagtccgactaccccctgtcagacgagtac
agcgagaacgagctggagctctaccagcagtactgcgccggcaaatacgcagaccagggc
tggaacagtgatgaagacgacggtccgtatcttgattccaccttgcgaaagagagccgtg
aaggtcaagcatgtgaagaggagagagaagcggtctgagaaaaagaaagaggagaataag
ccccgtaaacacaaaccgaagcagaaacacagggacaaagtgaggcacagtgagaggaca
gaagcgcgagacggcggtgaagtcaggcagtgcctcggaccaggctgcgtcgaatcggcg
cgtcccaactccaagtactgctccgatgactgtggcatgaagctcgctgccaaccgaatc
tatgagatcctccctcagcgtatccagcagtggcagcagagcccctgcatcgccgaagag
cagggaaagaagcttctggaacgcatccgacgcgagcagcagttagcccggacacggctc
aaggacatggaggaacgttttcatgagttagaaggcatcatcgctaaggccaagcagcag
gtcgtccaacacgacgaagaggtaaacgaaggagatgacgacacagaccttcaaattttc
tgcgtctcctgcagtcacccggtcaaccccaaggtggcgctacgtcacatggagcgatgc
tattccaaatacgagagtcagacatcatttggctccatgtatcccacacgcatagagggt
gcaacaaggttgttctgtgacgtgtacaatactcaaagcaaaacatattgtaaaaggctt
caggtcctctgtcctgagcactcccgagatccaaaggttccagcagatgaggtgtgcgga
tgtcctttggtgcgtgacgtctttgagcccacgggcgagtactgccgagtgtcgaaacgc
aagtgcaacaaacactactgctgggagaaactccgccgggccgaggtggacctggagaga
gtgcgagtgtggtacaagttggacgagttgttcgaacaggaacgcaacgtccgaatagct
atgacgaatcgcgccggtctcctggctcttatgctacatcagacaattcaacatgaccca
cattcaacagacctgcgcgccaacaaaaacagatag
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