KEGG   Ictalurus punctatus (channel catfish): 108266173
Entry
108266173         CDS       T04658                                 
Symbol
col8a1a
Name
(RefSeq) collagen, type VIII, alpha 1a
  KO
K23455  collagen type VIII alpha
Organism
ipu  Ictalurus punctatus (channel catfish)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 108266173
NCBI-ProteinID: XP_017324701
Ensembl: ENSIPUG00000011482
UniProt: A0A2D0R3S0
LinkDB
Position
6:3364523..3376430
AA seq 717 aa
MAVVPFLVILVQVVLLPSVFGGAYYGHKPHHQQLQPVPHIPHKGIGKEMPHMQYPHYRKE
MPHFPMHMNKGKDKKGETMPRGEQGIQGEVGPQGPPGPQGPPGPPGPQGNGVAGSPGNPG
SPGPPGLPGVGKQGMPGMPGKPGDMGPSGKQGEQGPGGAKGLPGMPGPPGPPGSQGLPGI
GKPGGQGRPGLPGPKGEAGHKGLPGLPGLPGPKGDKGIGHPGPQGPKGLPGPPGPPGHKG
LPGVGKPGTPGLPGAPGKQGQPGPPGPLGPKGPPGLEGKQGPQGLPGIGKPGDGGLPGQP
GVPGHKGLPGPPGLPGKAGLPGFGKPGYPGPKGDKGMGGPPGPPGPKGDKGYVGPPGMIG
PQGPSGPPGPPGPVGLPGGIGERGPKGEGGEGGAKGEHGPVGEPGPPGISGQPGQAGEDG
EPGPRGAPGPIGPKGDGGEKGLTGPPGPPGPPGIKGEGGAPGPKGPQGPNGIPGFAGPGG
PIGPPGPPGPKGEAGAPGQAGPPGEGSPGVAGPFGPPGPPGPSGLPGQPGQTGPPGPPGP
PGPPALNPDLMGVLPEMGPALDGVKTSGYMKGKYGGGADIMGSNGLEMPAFTAQLTTPYP
PVGTPVVFDKLLYNGRQNYNPQTGVFTCDLPGIYYFSYHVHCKGSNVWVGLYRNGEPVMY
TYDEYKKGVLDQASGSAVVPLQPGDTVHIQLPSDEASGLYAGQYVHSSFSGFLLYPM
NT seq 2154 nt   +upstreamnt  +downstreamnt
atggctgtggttcctttcctggtgattttagtacaagtggtattattaccatctgttttt
ggaggagcatattacgggcacaaaccacatcatcagcagctccagcctgtacctcatata
cctcacaaaggtataggaaaagagatgcctcatatgcagtacccacattacaggaaagaa
atgccacactttcccatgcatatgaataaaggcaaggacaaaaaaggtgagaccatgcct
agaggtgagcagggtattcaaggtgaagttggaccacaaggacccccaggaccacaagga
ccaccaggacctcctggtcctcaaggaaatggtgtggcaggttctccaggaaatccaggt
tctcctggccctccagggttgcctggtgttggtaaacaaggaatgccaggcatgccagga
aagcctggtgatatgggaccatcaggaaaacaaggtgaacagggacctggtggagcaaag
ggactaccaggcatgccaggaccacctggtccccctggatcccagggcttgccaggaatt
gggaagccaggtggccaagggcgaccaggactgccaggacccaaaggagaagcagggcac
aaaggtctacctggtcttccggggttgcctggtccaaaaggggataagggaattggacat
cctgggccacaaggtcctaaaggcctaccagggcccccaggtccacctgggcataaagga
ttgccaggggtgggcaagcctggaacacctggtttgccaggagcaccaggtaaacaaggg
caacctggaccgcctggaccacttggtccaaaaggtccaccaggcttggagggcaaacaa
ggaccacaaggattgcctggcattgggaaaccaggtgacggtggattgccaggacaacca
ggtgtcccaggtcataaaggactaccagggccaccaggcttgccagggaaggctggatta
cctggatttggaaaaccaggataccctggcccaaagggtgacaaaggaatggggggacca
cctggtcctccaggaccaaaaggtgacaaaggatatgtagggccacctggtatgattgga
ccccaaggacccagtggtcctcctggccctccaggaccggtaggactgcctggtggtatt
ggtgaacgaggacctaaaggagagggaggtgaaggtggagcaaagggagaacatgggcct
gtaggagagccaggacctccaggaatttcaggccaaccaggtcaagcaggtgaggatggt
gagcctgggccacgaggagcaccaggacccatcggtcccaaaggagatggaggagagaag
ggtcttactggacctcctggccctcctggccctcctggtattaaaggagaagggggtgca
cctggtcccaaagggcctcagggacctaatggcattccagggtttgcaggaccaggggga
ccaattggaccacctggaccccctgggcctaagggagaagctggggctcctggccaggct
ggtcctccaggtgagggaagccctggtgttgctggcccttttggtcctcctgggcctcct
ggtccaagtggtttgccaggccagccaggtcaaacaggtcctcctggtcctccaggaccc
cctggaccacctgccctaaaccctgacctcatgggtgttctgcctgagatggggccagcc
ctggatggagtgaagactagtgggtatatgaaaggaaaatatggaggtggggccgatata
atgggttctaatggtcttgaaatgcctgcttttactgcacaactgactacaccctaccct
ccagttggcacaccagtggtattcgacaagctactgtataatggccgacagaactacaac
ccacagacaggtgtgttcacctgtgaccttcctggtatctattatttctcataccatgtg
cattgcaaggggtccaatgtgtgggtgggtctgtaccggaatggagaacctgtgatgtat
acatatgatgagtacaagaagggcgttttggaccaggcatctggcagtgctgtggttccg
ttacagccgggagacactgttcacatccaattaccatccgacgaggcatctggactctat
gcagggcaatatgtccactcttctttctctggtttcctactctatcccatgtag

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