Ictalurus punctatus (channel catfish): 108266493
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Entry
108266493 CDS
T04658
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03410
Base excision repair
ipu04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108266493
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108266493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ipu03032
]
108266493
03036 Chromosome and associated proteins [BR:
ipu03036
]
108266493
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108266493
Enzymes [BR:
ipu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
108266493
DNA replication proteins [BR:
ipu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
108266493
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
108266493
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
108266493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
PARP
VWA_3
VIT_2
VWA
VWA_2
BRCT
BRCT_2
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
108266493
NCBI-ProteinID:
XP_017325370
Ensembl:
ENSIPUG00000003181
UniProt:
A0A2D0R6D2
LinkDB
All DBs
Position
6:complement(33146437..33165961)
Genome browser
AA seq
1944 aa
AA seq
DB search
MAIFSDCSVVLDLKNVPFKEKRKLMTAILDNGGNISYVVNQKCSFVVATSLENISSSRWR
SAQKHQTPVVDLQYVWSCLEKGLLLPVQEHVLKPQSSDLTPEQAPHPAGVKSRDRLQVRN
SGVDDERAQIEAKDGSYLGRFRFYKENDRDVPEFSSDFQVAKYSILSKLKTWSVLELQSA
KGQAGQRYRVVSSIMHEAEKRVSWEKQVHSCSSEDAVEAYLMLRKELQVQGFTQTQTFPP
WAEKLTSHGLRQLLLEEKLNCSTVSQDVGVFVELIWTEALGSLRSILTVPVTNISLNDVS
RVEGLLLQVQKSQREDEVKGLLEQVNTLLPLRIREPDSKNKLVSQKLDLCQLIRDILNMT
EATLGNPSPSSLGKYRALRCSIEQVPCQSPEFLCVSQLLQDRPAQIQQILRVSRATELRM
FKNELGNVKSLLHSTSSSSLVGILSRGLLLPKVGVEQHGIERTDIGNLGSGIYFSDSLNT
SVKYSKPSVTDGCRLLLVCEVALGQCKDLHERAFSWTSAPEGYNSVHGVRRTEKTHSDFE
DDEYVVYNTEQIRLKYVVRYFLPEDEVKDFQPHVDATLAPLHSAPSSHLLSSDDGEGLGV
TKNPLEEVTAGLLDSNGQTLPLQAVHVRCKLMDLLSQVVIFQTYTNDSSVPIEAKYVFPL
EETAAVCGFEAFINGKHVVGKVKEKEQARKEYKQAIEKGHGAYLMDQDAPDVFTISVGNL
PPGATVLIKVTFITELVVRAGTIVFSLPGSVAPWQQSSALNQRTQTTVEKVCVNELQPEG
EFSLCMSIEMPYEIVNLECSHQIKIKRTDCKAVVSTLPDQTLSTDGFRLSFTLHQIHMPR
MWVEKHPEKDTEACMLVFYPHFESSGVSGSDVSDVIVVLDTSESMRGEAMLNARRIALKV
LNSLDRSLRVNIISFGSDYKEAFPSANPLEEGFEEAKNFIMSSAAVGGSTELWRPLRTLN
LLPPSRGVRNVVLISDGHVQNQPETLQLVRDNVRHTRLFTCGLSLTANRYMLRALAQAGG
GTYEFFDTKTKHTWAEKVNSQVRCMVSPGCSSVAVKWQQFNPTAPSPVQAPSQLHALFSD
SHTLVYGFVPHCTRATLFGDLSGQEIETMVCTTELQKTKGTFLHKLTARAIIRDYEDGSL
GSSEAEHEGKKAELKSYIIELSKEFSILSQFTSFVAIEERDQEQPESGFTDVPKIIAEED
VDILSYMGWTEQKQWDQESDSEFFLLEECCGLEVDCLLEEACRGFLLASEFYEGSESSGR
ESPEPSCLQSLMVEHVFPATGSVLRSEAFSHTASTDTNERTCSTPPPLQEQMARTTSEHF
NRNTTSTKFEALLSKRALDLVSLNLPATNFDQGLGFGSVVYGSASRDVFTSPQISSPPSL
PPRNGIEAHLPRPSFNTPLSSCFQAFPGEVSEPLNLVLMESPLSDRSRATTSDLDLRAAA
PTRRIIGAPLRRQSLSHCGRSENRTFVDSLGGDCLTSHGLSPSFSIAPRPSLPSVDSVEH
ACIADLAPSPHFSIAAPAPPPSVAFGFGGSAPAPAPPPPSVAFGFGGSAPAPAPPPPSVA
FRFGRSAPAPPAPSVAFGFGGSAPAPAPPAPSVAFGFGGSAPAPAPPAPSVAFGFGGSAP
APAPPAPSVAFGFLGSAPAPAPPPSFAFGLGAPAHLPPPGVAFGAPAHPPPPPPPPPSVD
FGFQTSSSSHHLQLQKPPSYRPLAQKSQSRYTETVAEADIGPAKLYVSRVMNQLIRSCEK
ENSAITRSTVPLVETDGDSVQTDGVSKRLRRPDRINWDELFNLQHRDGYWECTGTLSRFL
GLDVDFFANVFLREKGICSLGAKAHADILKLISTLLVLQLMRVMSSPSAIFFQSLFRLTD
RPEPRPACWEAVKRAVEWVCWADRQYPCVCSRLEFGRDWESCTRQLLGLESLPPFSPLIP
VLQRSTGLPVSRHETVIKTSTVAR
NT seq
5835 nt
NT seq
+upstream
nt +downstream
nt
atggctatattcagtgactgctctgtggttctggacctgaaaaatgtcccttttaaggag
aaaagaaagctgatgactgctatattggacaatggaggaaacatatcatatgtagtgaac
caaaagtgttcgtttgtggttgcgaccagcctggagaacataagcagtagcaggtggagg
agtgctcagaaacaccagacacctgtggtcgatctgcagtacgtgtggagctgcctggag
aaaggactgctgcttcctgtccaagaacacgtcttaaagccacagagctccgacctcaca
cctgaacaagctccacaccctgcaggagtgaagtccagagatcggcttcaggtccgaaac
agtggcgtcgatgatgagagagcccagattgaggcgaaggatggttcgtacctgggccgg
ttcagattctacaaggaaaatgatcgtgatgtgccggaattttcttcagatttccaagtt
gccaagtattccattttgtccaagctcaagacctggtcagttctggagcttcagagtgcc
aaaggccaagcaggacagcgatatcgtgttgtgagctccatcatgcacgaggcagagaag
agagtgtcgtgggagaagcaggtgcacagctgtagctctgaggatgctgtggaggcatat
ctgatgctgagaaaggagctgcaggtccaaggcttcactcagacgcagacatttccccca
tgggctgaaaagctgacctctcacggcctccggcagctcctgttggaggagaagctgaac
tgcagtacagtctcccaggatgtgggcgtctttgtagaactcatctggacagaagctctc
ggttcactcaggagtatcctgacggtccctgttaccaacatcagtctcaatgatgtgagc
agggtggaaggattactgctgcaggtacagaagagtcagcgcgaggacgaagtcaagggt
ctgctggagcaagtcaacactctgctacctcttagaataagagagccagactcaaaaaac
aagctggtgtcccagaaactagatctctgtcagctgatcagagatatcctgaacatgacg
gaggcgactttgggaaaccccagtccatcctctctggggaaatatcgtgctctgaggtgc
agtattgagcaggtgccgtgtcaaagcccagagttcctgtgtgtcagccagcttctgcag
gatcggccagctcagatccagcagatactgcgtgtgagtagagcgacggagcttcgtatg
tttaagaatgaactcggcaacgtgaagtctctcctccattccaccagttccagcagcctg
gtaggaatcctgtctcggggtctgttactgcccaaggtcggagtagagcagcatgggatt
gaaagaacagacatcgggaatctgggaagtggcatctacttcagtgactcgttaaacacg
tcggtcaaatattccaaacccagtgtgaccgatggctgtcggctcctgctggtctgtgag
gtggctctgggccagtgtaaagaccttcacgaaagggctttcagttggacctctgcccct
gagggctacaacagcgtgcatggagttcgccgtacagaaaagacgcactctgattttgag
gatgatgaatacgtggtgtataacaccgaacagatcaggctgaaatatgtagttcggtat
tttctacccgaggatgaagtgaaggactttcagcctcatgttgacgcgactctagcacct
ctacattctgctccatcttctcacctcttgtccagtgatgacggtgagggtttgggcgtg
accaaaaaccctctggaggaggtcactgctggtttattggacagtaatggtcagacgctc
cccctgcaggctgtgcatgtgagatgtaagctaatggaccttctctctcaggttgtcatt
ttccagacatacacaaatgacagcagcgttcctattgaggcgaagtatgtcttccctcta
gaagagaccgcagcagtgtgtggttttgaagccttcattaacggaaagcatgttgttgga
aaggtaaaggagaaggagcaggcgcgtaaagaatacaagcaggctatagagaaaggccat
ggagcctacctgatggaccaggatgcacctgatgtgttcaccatcagtgtgggaaacctg
ccccctggagccacagtgctgattaaagtgacgttcatcactgagctggttgtgagagca
ggcaccatcgtcttctccctgccaggcagtgtagctccatggcagcaaagctcagcactg
aaccagagaacccagacgaccgttgaaaaggtctgtgtgaacgagcttcaaccagaggga
gaattctctctgtgcatgtctatcgagatgccttatgagatcgttaacctggagtgctct
catcaaatcaaaatcaagaggacggattgtaaggctgtagtgagcacattaccagaccag
actctcagcaccgacggcttccggctcagctttacgctgcatcagatccatatgcccaga
atgtgggtggagaaacatccagagaaggacactgaggcctgcatgttggtgttttatcca
cactttgagtccagcggcgtttcggggtcagatgtgagtgatgtgatcgttgtgctggac
acgtcggagtccatgcgaggagaggcgatgctgaacgcacgcaggattgctctgaaggtc
ctcaactcactggaccggtcacttcgagtcaacatcatctcctttggctctgattacaaa
gaggccttcccttcagcaaatccgctagaggagggatttgaagaagccaagaacttcatt
atgtcctcggctgctgtgggcggaagcactgagctatggagacctctgcgcaccctgaat
cttctgcctccttcacgtggtgtgagaaacgtggtgctgatctccgatggacatgtgcag
aaccagcctgaaaccctgcagctggtgcgagacaacgtcagacacacacgcctcttcact
tgcggccttagcctgacagctaatcgttacatgctcagagccctggctcaggcaggtgga
ggaacttatgagttttttgacacaaagacaaagcacacgtgggctgagaaggtgaattct
caggtgaggtgcatggtatcaccaggctgcagttctgtggcagtgaagtggcagcagttc
aaccccacagcgccctctcctgttcaggctccctcacagctccacgctctctttagtgac
tcgcacactctggtctatggctttgtcccacactgcactcgggccacactttttggtgat
ctgagtgggcaggaaatcgagaccatggtttgtacgacagaattacagaagacgaaagga
acgttccttcacaagctaacagcaagagcgatcatcagagactatgaggatggcagcctt
ggctctagtgaggctgagcatgaggggaagaaagcagagctcaaatcctacatcatcgag
ctcagtaaagagttctccatcctgtcacagttcaccagcttcgttgctatcgaagagaga
gaccaggaacaacctgagtccggctttactgacgtccctaagataattgcagaggaagat
gtggatattctctcttacatgggctggaccgaacagaaacagtgggatcaggagtccgac
tcggaattttttctactggaagaatgttgtggattggaagtggattgtctactggaagag
gcttgtagaggatttttactagcgtccgagttttatgaaggatctgaatccagtggaagg
gaatcaccagaaccgtcttgcctccagtcattaatggtggaacatgtcttccccgctact
gggagcgtgctacggtctgaagcattttcccacacagcttccacagatacaaacgaaagg
acatgctcaactcctccacctctgcaggaacaaatggccaggaccacatcagaacacttt
aacagaaatacgacttcaacgaagtttgaagctcttctttctaaacgtgcacttgacctt
gtgagcctcaacttgcctgcaactaatttcgatcaaggtcttggttttggttctgttgtt
tatggatcagcttctcgtgatgtctttacttccccccagatatcttctcctccttctctt
cctcccagaaatggaattgaagcccatcttcctcgtcctagttttaacactcctcttagt
tcgtgttttcaagcttttcctggtgaagtttctgaacctcttaatcttgttttgatggag
tctccccttagtgatcgttccagagcaactacttctgatcttgatttaagagccgctgct
cctactcgacgtattattggagctcctcttcgtcgccaatctctttctcattgtggtaga
tctgaaaatcgcactttcgttgattcactaggtggagattgtcttacctctcatggcctt
tctccttcttttagtattgctcctcgtccttcacttcctagtgttgattcagtagaacac
gcttgtattgccgatcttgccccttctcctcattttagtattgctgctcctgctcctcct
cctagtgttgcttttggttttggtggctctgctcctgctcctgctcctcctcctcctagt
gttgcttttggttttggtggctctgctcctgctcctgctcctcctcctcctagtgttgct
tttcgttttggtcgctctgctcctgctcctcctgctcctagtgttgcttttggttttggt
ggctctgctcctgctcctgctcctcctgctcctagtgttgcttttggttttggtggctct
gctcctgctcctgctcctcctgctcctagtgttgcttttggttttggtggctctgctcct
gctcctgctcctcctgctcctagtgttgcttttggttttcttggctctgctcctgctcct
gctcctcctcctagttttgcttttggtcttggagcccctgctcatcttcctcctcctgga
gttgcttttggagcccctgctcatcctcctcctcctcctcctcctcctcctagtgttgat
tttggttttcaaacgtcatcttcttctcatcatctccaactccagaagccgccatcttat
cgtcctcttgcccaaaaaagccagtctcggtacactgagacagtagctgaagcggacatc
ggtccggcaaaattatacgtttccagagttatgaatcaactcataagatcgtgtgaaaaa
gaaaacagtgctataacccgaagcacagttccccttgtggaaacagacggcgactcggtg
cagacagacggcgtaagtaaacgactcagacgacctgacaggatcaactgggacgagctg
tttaaccttcaacaccgggatggctactgggagtgtactgggacactgagtagattcctg
ggcctggatgtagacttctttgctaatgtcttcctgagagagaaaggcatctgttctttg
ggtgcaaaggctcatgcggacatcctgaagctgatctccacgctgctggtgctacagttg
atgcgagtgatgagctccccgtctgccatcttcttccagtctctcttccgcctcactgac
cgccccgaacccaggccggcctgctgggaggcagtgaagagggcagtggagtgggtgtgc
tgggcagacagacagtacccgtgtgtgtgcagcaggctggagtttggccgggactgggag
tcctgcacacgccaacttctgggattggaatcgcttcctcccttctcacctctgatccct
gtgctccagagaagtacaggcctgccagtcagtcggcacgagacagtcattaaaacaagt
acagtagctcgttaa
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integrated database retrieval system
