KEGG   Ictalurus punctatus (channel catfish): 108266585
Entry
108266585         CDS       T04658                                 
Name
(RefSeq) lysine-specific demethylase 6A isoform X1
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ipu03036]
    108266585
Enzymes [BR:ipu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     108266585
Chromosome and associated proteins [BR:ipu03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     108266585
   Histone demethylases
    108266585
SSDB
Motif
Pfam: KDM6_C-hel TPR_1 JmjC KDM6_GATAL TPR_2 TPR_17 TPR_8 TPR_16 TPR_12 TPR_19 TPR_11 TPR_9 TPR_7 ANAPC8 PPTA
Other DBs
NCBI-GeneID: 108266585
NCBI-ProteinID: XP_017325596
Ensembl: ENSIPUG00000022913
UniProt: A0A2D0R6B5
LinkDB
Position
6:21089926..21137426
AA seq 1438 aa
MKSWGVSVASAACTAATAAAAAAAAAARSLGDDDEEKKMAARKPSESEEDFPKLTAEERE
CLAGVDSSLFGFQRLHEDGARTKALLLKAIRCYDAYILKSEGKVEPEVFCQLGHFNLLLD
NYPKALSAYQRYYSLQSDYWKNAAFLYGLGMVYFHYNAFQWAIKAFQEVLYIDPSFSRAK
EIHLRLGLMFKVNTDYDLSLKHFQLALIDSTPCTLSKAEIHFHIAHLYEIQKKYRAAKEA
YESLLLTENLPVQVKATTLQQLGWMHHTVEQLGDKANKDSYAIQCLQKSLETDPDSGQSW
YFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQL
DHSHAAAWMDLGTLYESCNQPQDAIKCYLNATCSKSCSNVTALTARIKCLQAQLCNLQQS
SLQSKSKMLPSIEEAWSLPIPAELTSRQGALNTAQQQAGKSHQRGEGQSQLPAQTLPPHM
LSKSVDQSSPSKRKRTTSPSKSSGDICTNNPVQQQVPNWYLTPQKIQLLEQLRANRANLK
PMQLQMLDHLEKQFILMQQHQQMRLNAAGEIRPTLSNGPCPKSDPSLPDSKSLPSPRHTP
VALSNVPNTTQPSFRTPCTLQPMANGPIPASPSPCSTAGALANTEKNSVGNNHLPGPGSN
GNVPYLQQNALPRNCATPTSSSSTMNDQLWKSQHVSSTQGLNKSPGSHLAGPNGERPLSS
TGTSPPSCTSVPNECGYSAQEALNPLPSPPVPHSSTSGGQQGPAPTKESMPSSNGHLAGM
PNSTATAGRPNHVHQGLAGAAVPELCSPAQLSPDNLPLSALLMGKANSNDVSKDSGVVAL
GTTVNSIHLQMSSKTQENSVASSPCSAMSTATPSPKSTEHNSAGSLNSPRLNGKGLEDSQ
SPMKVDSPLVCSKAPTPSLVPWASVSIYPSSREVLKACRHLGKNGVSTSSILLDRCPPPR
VPPSPFPPLPKDKLNPPTPSIYLESKRDAFFPPLHQFCTNASNPVTVIRGLAGALKLDLG
LFSTKTLVEANPDHLVEVRTQFSQPTDENWDVTGTRKTWRCESSRSHTTISKYAQYQASS
FQESLREENEKKGQKEHSDTESAPAENLVRRRRGPFKHIKFGTNIDLSDERKWKLQLAEL
SKLPAFARVVSAGNLLTHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGD
CEWFAVPESYWGVLNDFCEKNNINFLMGSWWPNLEDLYEANVPVYRFIQRPGDLVWLNTG
TVHWVQAIGWCNNVAWNVGPLTAHQYKLAVERYEWNKLQSVKSIVPMIHLSWNLARNIKV
SDHKLFEMIKYCLLKTLKQCQMLREAVIAAGRELMWHGRTKDEPAHYCSICEVEVFDLLF
VTSESNSRKTYVVHCQDCARRGSQNLDNFVVLEQYKMEDLMQVYDQFTLASPLPSSTS
NT seq 4317 nt   +upstreamnt  +downstreamnt
atgaaatcgtggggagtgtcagtggcctctgcagcctgcaccgccgcaacagccgctgct
gctgccgctgctgctgctgctcggagtctcggcgatgatgatgaggaaaagaaaatggcg
gcgcggaaaccgagtgaaagcgaagaggactttccaaagctcacagctgaagaaagagaa
tgcttggctggcgttgacagctcactgtttggatttcagaggcttcatgaagatggcgcc
agaacgaaggccttgctgttaaaggccattcgctgctatgacgcctacatcttgaaatcc
gaaggaaaagttgagcccgaggtgttttgccagttaggccacttcaacctcttgctagac
aattaccctaaagcattatctgcataccagaggtactacagtttacagtcagactactgg
aagaatgctgcctttttatatggccttggcatggtttacttccattacaatgcgtttcag
tgggcgataaaagcctttcaggaggtgctttacattgatcccagcttctctagagccaag
gagatccacctgcggttggggctgatgtttaaagtcaacacagactacgacttgagccta
aagcatttccagctggctttgattgactccacaccctgcactttgtctaaagctgaaatt
cacttccacattgctcatttatatgaaattcagaagaagtaccgtgcagcaaaagaagca
tatgaaagtctgttactgaccgagaatctcccagtacaggtgaaggcaaccactcttcaa
caactgggctggatgcatcacacagtagaacagctaggagataaagctaacaaagacagc
tatgctattcagtgtctgcagaagtctctggaaacagatcctgactctggacaatcttgg
tacttcctgggcaggtgctactccagtattggaaaggtccaggatgcatttatttcatac
aggcaatccattgataagtcagaggctagtgctgatacttggtgctcaataggtgtgttg
tatcagcagcagaaccagccgatggatgcacttcaggcctacatatgcgcagtacagctg
gatcacagccatgcagctgcctggatggacctgggaaccctctatgagtcttgcaaccag
cctcaagatgccatcaaatgctaccttaacgccacctgcagcaagtcctgctctaacgtt
actgccctcactgcccgtataaaatgcttacaggctcagttgtgtaatctacaacaaagt
agtctacagagtaaaagtaaaatgctccctagtattgaggaggcatggagcctaccaatt
ccagcagagcttacctccagacagggagccctgaacacagcacagcagcaagcaggaaaa
tctcatcagcgtggtgaaggtcagtcccagctcccagcacagacactgcctccacacatg
ctctctaagtcagttgaccagtcgagtcctagcaagcggaagaggactactagtccatcc
aagagttcaggtgacatctgcaccaacaatccagtccaacagcaagttccaaactggtac
ctaactccccagaagattcagctcctggaacagttgcgggctaacagggcaaacctgaag
ccaatgcagcttcaaatgttagaccatttggaaaaacaattcattcttatgcagcagcat
cagcagatgagattgaatgctgctggtgaaatacggcccaccttatccaatggcccttgt
ccaaaaagtgacccatcactgcctgattcaaaatcgctcccatcaccgcgccatacacca
gttgcgctctccaacgtcccaaacaccactcagccctcatttcggacaccctgcaccctt
cagccaatggccaatggacctattcctgcgagcccctccccctgcagtactgctggagcc
ctggctaacacggagaaaaactctgtgggcaataatcacttaccagggccagggagcaat
ggaaatgtgccttacctgcagcaaaacgcactacctcgtaactgtgcaacccctaccagc
agcagcagcacaatgaatgatcagttgtggaaaagccaacatgtcagttccactcagggg
cttaacaaaagtccgggttcgcatttagcaggtcccaatggtgagcggccactttcttcc
acagggacgtctccaccttcctgcactagcgttccaaatgagtgtggatattctgcacag
gaggctctcaatccccttccctctcccccggtccctcactcctctacctcaggtggacag
caaggccctgctccgaccaaagagagcatgccttcctcaaatgggcatttggcgggaatg
cccaacagcactgccactgcaggacggcctaatcacgtccatcagggcctggcaggtgct
gctgtgcccgaactctgctcaccagctcaactcagtccagacaatcttccgctctcagcc
ttgcttatgggaaaagccaatagtaatgatgttagtaaagacagtggggtagttgctctt
ggcacaacagttaacagcattcacctacaaatgagctctaagacgcaggagaattctgtg
gcttcatcaccctgctcggccatgtctacagccacaccttcgcccaaatccacggagcac
aacagtgctggcagccttaacagtcccaggctcaatgggaaaggcttggaggactcacaa
agcccaatgaaggttgattctcctttagtctgctctaaagctccaacaccttcgcttgtt
ccgtgggcatccgtctccatctacccaagctccagggaggtgcttaaagcctgcaggcac
cttgggaaaaatggtgtatccacgagtagcattttattggacagatgtccccctccaagg
gttcctccttcacccttccctccactaccaaaggacaaactcaacccccctacccctagt
atttatttggagagcaagagggatgcgttctttcccccacttcaccagttctgcactaat
gcgtccaaccctgttacagttatccgaggccttgctggagcacttaagctggaccttggt
ctattctccactaagaccttggtggaggccaacccagatcacctggtggaagtgagaact
cagttttctcagcccactgatgagaactgggatgtaactggcaccaggaagacatggcgc
tgcgagagtagccgatctcataccactatctccaagtatgcgcagtaccaggcctcctct
ttccaggagtctctgcgtgaggagaatgaaaagaaaggacaaaaggagcactcggacaca
gaatccgctcctgcagaaaatttggtacgacgacggagaggtccctttaagcatatcaag
tttgggacaaacattgacttgtcagacgagcgaaaatggaaactgcagctggctgagttg
agtaagctgcctgcatttgctcgagttgtttctgcagggaacctgctcactcacgtgggc
cataccatcctgggcatgaatactgtccagctctatatgaaggtcccaggcagcaggaca
ccaggtcatcaagaaaacaacaatttctgttcagtcaacattaacatcggcccaggagac
tgtgagtggtttgctgtacccgagtcttactggggtgttctgaatgacttttgtgagaag
aacaacataaatttcctgatgggctcatggtggcctaacctggaagacttgtatgaagct
aatgtgccagtgtatcgcttcatccagagaccaggagacctggtgtggctgaacacaggc
acagtacactgggtgcaggccattggctggtgcaataatgtagcctggaatgtaggccct
ctcaccgcacatcagtacaagttggcagtggagcgctatgagtggaacaaactccagagt
gtcaaatccatcgttcctatgattcacctctcttggaacctggccagaaacattaaagtg
tcggaccacaagctctttgagatgatcaagtactgtttgctgaagacactgaagcagtgt
cagatgctcagggaggctgtgatagcagcaggcagggagctgatgtggcatgggaggacc
aaggatgagccagcacactactgtagcatttgtgaggttgaggtctttgacctactgttt
gtcaccagtgagagcaactcacggaagacgtatgtggtgcattgtcaggactgtgctcga
cgaggcagtcagaaccttgacaactttgtagttttggagcagtacaagatggaggatctc
atgcaagtctacgaccagttcacattagcttcacctctgccttcctccacgtcttga

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