Ictalurus punctatus (channel catfish): 108266607
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Entry
108266607 CDS
T04658
Name
(RefSeq) target of Nesh-SH3 isoform X1
KO
K24477
target of Nesh-SH3
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108266607
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
108266607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TARSH_C
fn3
Motif
Other DBs
NCBI-GeneID:
108266607
NCBI-ProteinID:
XP_017325635
Ensembl:
ENSIPUG00000011289
UniProt:
A0A2D0R736
LinkDB
All DBs
Position
6:complement(3398137..3432652)
Genome browser
AA seq
1589 aa
AA seq
DB search
MSVFLLLLILGEVLLPNLTCASRVRRQTTKVRISAIGDTIMLKFLQPHMDTKLEGYILGY
GSNMFSKQFIQLPDDGEPYETEIDAEPKYLVAVQPVKEEEVKKQCAGKETLERPLHLVIG
SVTPTSVMLSWGTLLNTLSSETNLDDCIEDGHFTVRYREKEPKKKWNYQTCPTTETIIDR
LKPDTPYEFGVRAESGNINGAWSPPIIHNTADDIDIHEPVKPENFPRPTKPVTESPQTFS
PSMPLLSSVTQNRPASILRPPSPTQRVTQVKDISNHKTLKPENFLGSKKPITESPQAFSS
SVPLLPRVTQSRPASLLRPPAPSPIPTVTLDIHKPLKPEIFLKPEKPITESPSAFSASVP
FLSSETQSSLISDLRNPAPRPTQRVVQVTDIHKPLKPESVLRPKKPVTESPQTFSPSVPL
LPRVTQSRPASLLRPPAPSPIPRVTLGTASDGIRTPRPSEDSVSLPQTLNSTHTTKSNLK
TNNILQTHNSTISSLSSTSQQPLHATHSQLTTSKPLFNTPKTQTNTTTTVSSTVKAQLNL
TQKKRTQLHNAIHPQLESSTSTFQLRMTQFQQHTTKYPLKTPQLYTVHPQTSINQSQHST
AKGLYKTTQNMFTTLEPITTQSQPHATQPQSVTSQSQPHTVYPQSNKKQSHTHATQPKPS
ATQSSPHTTQPQSIATQSQPHTTQFQTSTVKYYPRTAQPQPSTTQSQPHTSQPITIQSQP
HTAQFQTSTVIHHPRTAQPQPSTTQSHPHTAQPQPMTIQSQPHTSQPQPITIQSQPHTTQ
LQTSTIKYHPRTAQPQPSTTQSQPHTSQPQHITIQSQPHTTQFQASTVKYHPRTAQPQPS
TTRSPPHTSQTITIQSQPHTSQPQPITIQSQPHTSQPQPITIQSQPHTTQFQSSTVKYHP
RTDQPQPSTTQSQPHTSQPITIESQPHRTQFQNSTVKHHPGTTKTQPTTTRSQPQPIKTQ
SNPNKHTEKSQPKTVQPKLTTTKSKPRKNKQKTRVPQSSTVQPQPTTNQSSTAKYHPTVR
SHKQPVTNQHHKNIIKPKFTHEPNTYYQFSTTFEGLSTTEFQQKPDHHPSRATIKHSNTN
TRQNGKTEHTVTSKPKQPVQTPLEQSNTQNSPWREKKLVNKTLPVSKMAPSQSLDGHLTK
PALVSGATNRNQGQDMPSPSASVARTSAPTVTKRVSPVTVLNPISLPPTYSNTSVRTAPA
SHNEKHKGKLWDKPIKRPRKEPDLNEIKKQKNKVPKNGGKGKTHDKVVDLKVVDALPFQK
PSDAPPTTELYQKPTPATTPFFAVNGSRYYMGDNSSVFSSVPVSEVDPMGKKRFVAPHVI
YQIDKPPEQPCSVTHSLSFFPDEENGVANISGPPKTPPTNVTVVTVEGCPSFVIVDWEKT
DNETTEYEVTSSVINPNGQVVSVVKTNQTHAAVENLKPESSYEFTVTPKNELGSGPSSEP
VSFSTESADPRVREVQTGKNAIWSSFSFDADSYSECTGTQYVKRTWYRKFVGIQLCNSLR
YKIYLSDSLKGKFYNIGDETGYGEDHCQFVDSFLDGRTGSLLPPHQLPLKQGYFRSIRQE
PVKFGKIGGRTQINYVSWYECGVPIPGSW
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcttcctgctcctcctcatcctcggtgaggtcctgctccctaacctcacctgc
gcatccagagtgcgcaggcagactacaaaggttcggatcagtgctataggagacaccatc
atgctgaagttccttcagccacacatggacactaagctggagggctacatcctgggctac
ggcagcaacatgttctccaagcagttcatccaactccctgatgatggggaaccttatgaa
actgaaattgacgctgagccaaaatatctagttgcagtacaaccagtcaaagaagaagag
gtgaaaaaacagtgcgcagggaaggagactctggagaggcctctgcatctggtgattggc
tctgtgaccccgacctcagttatgctgtcctggggcacactgctaaataccctttccagt
gaaaccaacctggacgactgcatcgaggacggtcacttcaccgtgcgctacagggagaag
gagcccaagaagaagtggaactatcagacatgccccaccacagaaacaatcattgaccga
ctcaaaccagacacgccatatgagtttggggtccgagcagagtctggaaatatcaatgga
gcctggagccctccaataatccacaacacagctgacgatatcgacattcatgaaccagtg
aagcctgagaactttcccagacctacgaaacccgtcaccgaaagccctcaaactttctcc
ccctcgatgcctcttctgtccagcgtgactcagaacagaccagcgtccatcctcagaccc
ccgtctcctacacagagggtaactcaagtaaaagatataagcaatcataaaacactaaag
cctgagaactttctgggttctaagaagcccatcaccgaaagccctcaagctttctcctcc
tcggtgcctcttctgcccagggtgactcagagcagaccagcttccctcctcagaccccca
gcaccctctcctataccgacggtaactctggacattcataaaccactgaagcctgagatc
tttctgaagcctgagaagcccatcaccgaaagcccatctgctttctccgcctcggtgcct
tttctgtccagtgagactcagagcagtctgatctctgacctcagaaacccagcaccccgt
cctacacagagggtagttcaagttacagacattcataaaccactgaagcctgagagcgtt
ttgagaccaaagaaacccgtcaccgaaagccctcaaactttctccccttcggtgcctctt
ctgcccagggtgactcagagcagaccagcttccctcctcagacccccagcaccctctcct
ataccaagggtaactctgggaacagcaagcgatggcataagaactccacgtccttctgaa
gattcagtgtccttgccccagaccctcaactcaactcacacaacaaagagcaatttaaaa
accaataatattcttcaaactcacaattctactatatcatctctttcgagtacctcccaa
caaccacttcacgcaacccattcccaactgaccacaagtaaacctctattcaacacaccc
aaaacacagaccaacacaaccacaacggtatctagcacagtcaaagctcaactcaattta
acccaaaagaaaaggacccaactccacaacgcaattcatccccaactcgaatccagcaca
tccacattccaacttagaatgacccagttccaacaacatacaaccaaataccctcttaaa
acaccccaactctatacagttcaccctcaaactagtataaaccagtcccaacacagcaca
gccaaaggcctatacaaaacaacccaaaacatgtttacaacacttgaacccatcacaact
caatcccaaccccacgcaactcaaccccagtctgttacaagccaatcccagccgcacaca
gtttatccccaatccaacaaaaaacagtctcatactcatgcaactcaacccaaacccagt
gcaacccaatcttcaccccacacaacccaaccccaatccattgcaacccaatctcaaccc
cacacaactcaattccaaactagcacagtaaaatactacccaagaacagcccaaccccaa
ccctccacaacccaatctcaaccccacacatcccaacccattacaatacaatctcaaccc
cacacagctcaattccaaactagcacagtaatacatcacccaagaacagcccaaccccaa
ccctccacaacccagtctcatccccacacagcccaaccccaacccatgacaatacaatct
caaccccacacatcccaaccccaacccattacaatacaatctcaaccccacacaactcaa
ttacaaactagcacaataaaataccacccaagaacagcccaaccccaaccctccacaacc
cagtctcaaccccacacatcccaaccccaacacattacaatacaatctcaaccccacaca
actcaattccaagctagcacagtaaaataccacccaagaacagcccaaccccaaccctcc
acaacaagatctcctccccacacatcccaaaccattacaatacaatctcaaccccacaca
tcccaaccccaacccattacaatacaatctcaaccccacacatcccaaccccaacccatt
acaatacaatctcaaccccacacaactcaattccaaagtagcacagtaaaataccaccca
agaacagaccaaccccaaccctccacaacccagtctcaaccccacacatcccaacccatt
acaatagaatctcaaccccacagaactcagttccaaaatagcacagtaaaacatcaccca
ggaacaaccaaaactcaacccaccacaacacgatctcaaccccaacccattaaaacccaa
tccaatccaaacaaacacacagaaaaatcccaaccaaaaacagtgcaacccaaattgacc
acaaccaaatccaaacccagaaaaaacaaacagaagaccagagtaccccaatccagcaca
gtacaaccccaaccaaccacaaaccaatccagtacagcaaaataccatcctaccgtcagg
tctcataaacagcctgtcacaaatcaacatcacaaaaatataatcaagccaaaatttaca
catgaacccaatacttactaccaattcagcacaacatttgaggggttaagcactactgaa
ttccaacaaaaacctgatcatcacccatcacgtgctacaataaaacattctaacaccaac
acacggcaaaatggtaaaactgaacataccgtcacgagtaagccaaagcaacctgtacaa
acacctttagaacaatcgaacacacaaaactcaccttggcgtgaaaagaagctggtcaac
aagacgctcccagtcagcaaaatggctccgagccaatcactggatggacatctaacaaag
cctgctcttgtcagtggggcaacgaataggaaccagggccaagacatgccttcaccttct
gcttctgtggcaagaacttcagcacctacagtaaccaagcgtgtctctccagtcacagtt
cttaatccaataagtttgcctcctacctactcaaacacctctgtcaggactgcaccggca
tcccataatgagaagcataaggggaagttatgggacaaacctatcaagagacctagaaaa
gagcctgatttaaatgaaatcaagaagcagaaaaacaaggtgcccaaaaatgggggtaaa
ggtaaaactcacgataaagtagttgatctgaaggtggtggatgcactaccgtttcagaaa
ccttcagatgctcctcctaccacagaactctatcaaaagccaacaccagcaaccacacca
ttttttgcggttaacggtagcaggtattacatgggggacaactcatctgtattcagttct
gttcctgtctcagaggtggacccgatgggaaagaaacgctttgtagcacctcatgtgatc
tatcagatagacaagcctccagagcagccatgttccgtcacgcactctctcagcttcttc
cctgatgaggagaatggtgtagcaaacatctcaggcccacccaagaccccgcccaccaac
gtcactgtcgttactgtggagggatgtccctcattcgtcatagtcgattgggagaaaaca
gacaacgagacgacagaatatgaagtcacttcctctgttataaatccaaatggacaagtc
gtatctgttgtaaaaaccaatcagacacacgcagctgtggagaacctgaaacccgagagc
agttacgagttcaccgtgacgcctaagaatgagctcggttcaggaccttccagtgagccg
gtatccttcagcaccgagtcggcggaccctcgggtgagagaagtccaaactggtaaaaat
gccatctggtcttcattctcattcgacgcagactcctattctgagtgcactggaacccaa
tatgtgaaacgtacatggtatcgcaagtttgtgggaattcagctgtgcaactcactcaga
tacaagatctacctaagtgattcactaaaagggaagttttataacattggggatgagact
ggatacggagaggatcattgtcagtttgttgattccttcctggatggacggacaggaagc
ctgctgccaccacaccaactaccactcaaacaaggttatttccggtccatacgccaggaa
cctgtgaagtttggaaagattggtggtagaacccagattaactatgtatcctggtacgag
tgtggagtccccattcccgggtcatggtag
DBGET
integrated database retrieval system