Ictalurus punctatus (channel catfish): 108267639
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Entry
108267639 CDS
T04658
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 4
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108267639
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
108267639
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
ig
fn3
LRR_5
Ig_2
LRR_9
LRRCT
Motif
Other DBs
NCBI-GeneID:
108267639
NCBI-ProteinID:
XP_017327406
Ensembl:
ENSIPUG00000001892
UniProt:
A0A2D0RA17
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All DBs
Position
7:complement(20674861..20717616)
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AA seq
965 aa
AA seq
DB search
MQASPPHQSKKSYPSLILHHHPGKTPSSSSLPFHRSTHSYSSILKPSHKLLPSDTPLCPK
YTCGFLAQSIPPPSPPLPSLHWLTLVTCACLLPALIGRIPGALAGETWGVVSSCPFHCVC
RNLSESLSTLCADKGLLFVPPNIDRRTVELRLADNFIREVGGTDFVNMTGLVDLTLSRNT
ISYIKPLAFADLESLRSLHLDGNRLTALGPRDLAGMLNLQHLILNNNQLINISYDAFDDF
LLTLEDLDLSYNNLHKAPWEAIQNMASLHTLNLDHNLIDQIEEGSFGELYKLARLDMTSN
RLQTLPPDPLFARSQTGVISPTPYNSVISLNFGGNPLHCNCELLWLRRLIRGDDMETCAT
PIHLAGRYFWSIPEEEFTCEPPLITRHTHKLWVLEGQKATLKCRAIGDPEPVVHWVSPDD
RIIANSSRTTSFRNGTLEFLVTVARDDGAYTCIAINAAGEATAIIDLKVIPLPHRGNGTV
SLARDPGSSDITRGKTSNGQTPSQDTNTDQQEGREEVEVEDGGSEGGEDQFVEVQGVTST
SAQVRWDIGRLSGAYLVWMYQIQYNCTADETLVYRILPSTSNSFLLKNLVSGADYNLCVL
AIFDDTVTSMAATKVLGCAQFSTKDNYPDCRSLQAHFLGGTLTILVGGVVVVTLLVFTVA
LMVRHRVCSNHNNHHGASGEVGCSGSDSSTRGKAANVFSQRNSSGEVMMVVLPNGLPQKQ
RGAVGGAESSSKSSSPTLKPQTLPKPKVNLEQLKAGVESQKALPPYTPETERMPMYYTLK
KPAPSTLPRQSYQPEAGLSKLHSTNRDIEKQASFSLVPPSHSDRRFSTGGSVIVGRGGRD
SGCNSETAYQSSGLSVARHRRSSSFDMGNMAATTCYGYAKRLSVIWSKRSQSLHGMLAQC
ASTNSISTTSSGSGDFHVRHTRGAIRTYKSNTMPSSRTHTEQSRDKGKEKVKAKDKGEEL
EESVV
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcctccccaccccatcaatctaaaaaatcatacccatccctcattttacatcat
catccaggtaaaacaccctcctcttcttctctcccctttcatcgatcaacccattcttac
tcatccatccttaagccatcacacaaactcttaccatcagatacacctctgtgtccaaaa
tacacctgtggttttctggcccaatccataccacccccaagcccacctctaccctcgctc
cattggctgacactggtcacatgtgcctgcttgctacctgctttgattggacggattcct
ggtgcactggcaggggaaacttggggcgtagtttcttcatgcccttttcactgcgtgtgc
cggaacctttcagagtcactgagcacactctgtgcggacaagggcctcctctttgttcca
ccaaacatcgaccgcaggaccgttgagcttcgtcttgctgacaacttcattagagaagtg
ggtggcacagattttgtcaacatgaccggattggtagatttaacactgtcacgaaacacc
atcagctacatcaaaccactggcatttgcagaccttgaaagtctccgctcattgcacttg
gatggaaatcgactgactgctctgggtccaagagacttggcgggtatgctgaacctgcag
cacctcattctaaacaacaaccagcttataaacatttcttatgatgcctttgatgatttt
ctcctcacattggaagacctggatctgtcttacaataatctgcacaaagcaccatgggaa
gcaatccagaacatggccagcttacatacgctcaatctcgatcacaacctcattgaccag
attgaagaaggttcctttggtgagctctacaaacttgctcggttagacatgacttccaat
cgccttcagactctaccacctgaccccctgtttgccaggtcccagacaggagtgatcagc
cctacaccctacaactcagtaatcagtttgaactttggaggaaacccattgcactgtaac
tgtgagctgctttggttacggagattgattcggggtgatgatatggagacttgcgctact
ccgattcacctggcaggacgctacttttggtcaatacctgaggaggaatttacctgtgag
cctccacttattactcgtcatacacacaaactctgggtcttagaggggcaaaaggcaaca
ctcaaatgccgagctattggagaccctgaaccagtggtgcactgggtctcacctgatgat
cggattattgctaactctagtcgtaccacctcattccgtaatgggacacttgaattccta
gtgactgtggcccgtgatgatggtgcttacacctgtattgcaatcaacgctgcaggtgaa
gccactgcgattatcgaccttaaggtcatccctcttcctcaccgagggaatgggacagtg
tctttagcccgtgacccaggctcatcagatattaccagaggaaaaacatccaatgggcag
acccccagccaggacactaacacagaccaacaggaaggtagagaagaagtagaggtagag
gatggagggagtgaaggaggagaggaccagtttgtggaggtacagggggtgacctccacc
tcagcacaggttcggtgggatataggacgactttcaggggcatacttggtttggatgtac
cagatacagtacaactgcaccgcagatgaaactctggtgtaccgaatcctgccctctacg
agtaacagcttcctcctgaagaatctggtctctggagcagattataacctgtgtgttttg
gccatttttgatgacacggtcacctccatggctgccacaaaggttcttggatgtgcacag
ttcagcaccaaggataattacccagactgccgttcactccaggcccactttctgggtgga
accttgaccatcctggtgggaggagtagtcgtggttacactactggtgtttacagtggcg
cttatggtgcgtcaccgggtctgcagtaaccacaacaatcatcatggcgctagtggagag
gttggatgctcaggatcagactcgtcaacccgagggaaagcagccaatgttttttcacag
agaaatagcagtggagaggtaatgatggtagtcttacctaatgggctgcctcaaaaacaa
agaggtgcagtaggaggggcggagtcatcatcaaagtcatcatctcccactctgaaaccc
caaacactgcctaagccgaaagtaaatctggagcagctaaaggcaggggtagaatcacag
aaggcacttccaccttataccccagaaactgaacgaatgccaatgtactacaccctcaag
aagccggccccatctacactgccacgccagtcatatcagccagaggcaggactttctaaa
ctccattccacaaacagggacatagagaaacaggctagctttagccttgtccccccatct
cacagtgatcggaggttcagcacaggtgggtctgttatagttggccgaggaggcagagac
agcggatgtaactcagagacagcctatcagagctcaggcctaagtgttgcacggcataga
cgtagctcctcatttgacatgggcaacatggcggccacaacctgctatggttacgccaag
cgtctgagtgtcatctggagcaaacggagccagtcactgcatggcatgctagcccagtgc
gcctccacgaacagcatctccaccaccagcagcggcagcggggatttccatgtgagacat
acacgtggcgccatccgcacctacaaatccaacactatgccttcaagcagaacacataca
gagcaaagtagagacaaaggtaaagagaaagtaaaggcaaaagataaaggagaagaactg
gaagaaagtgtggtgtag
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