Ictalurus punctatus (channel catfish): 108267667
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Entry
108267667 CDS
T04658
Name
(RefSeq) rho GTPase-activating protein 21 isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108267667
Membrane trafficking [BR:
ipu04131
]
Endosome - Golgi transport
Others
Others
108267667
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108267667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PH_9
PDZ_6
PDZ
PH_11
PDZ_2
Motif
Other DBs
NCBI-GeneID:
108267667
NCBI-ProteinID:
XP_053540363
Ensembl:
ENSIPUG00000003415
UniProt:
A0A9F7TM48
LinkDB
All DBs
Position
1:complement(36859845..36964673)
Genome browser
AA seq
1868 aa
AA seq
DB search
MMATRRGDDGVRAAASPASECKKDGHDPSELSPVSPMSPMSPAPMDQLFSWPGPKTLHLH
RTSQGFGFTLRHFIVYPPESAVHSTFKDEDNGSRGRPRCRLEPMDTIFVKQVKEGGSAHQ
AGLCTGDRIVKVNGESIIGKTYSQVIALIQDSDVSLELCVMPKDEDILQLFSRDITALAY
SKDAYLKGNEAYSGNAQNIPEPPSICYTRIEPKTSGMTHTDEPSAPSGAHGVLSPGAEPS
SDVGHCVEVHMTQLSPSPPGSQVSRLQNAACVYDESVRVAGVEVSNSLECSPRPYGSNTN
HRLQETKNTPLCTSSLENLSSVRPRSQTTPCSSFARGTKLHHTPQGPSESPGFSTHINIH
TPFHPDSTSTPSSRHAMSPFTPSPPAIASSPCSPMHQNIDWRNYTTYKEYIDNKRLYTYG
SRTIQERLDSLRAASQADKANASTEGMNLSQPRQRSTCHERGPANSGVQSLCSVSQERLE
VKERATSRDWHRSASQDALPSSTKSTYKPRARSCDYLGRQAESRVSLMDRRVYGRTETEE
KARICTEEETRGCRQSLSLGKVAQTQRTLVGGYGSFPGLNAKIKGTDPILSSRVQSLDNT
AASKAQLRFQTSVLDDSYVARALASLNMGLTTASVTTKNQRTGLVPNHMSPGWQTKSHQE
PVGSVPCPDYSKDSSRTQQDGSSVATNGLVAGGLEGAEATVVVVKREKTKKSGPLPLRHP
SYIQAVNDGAGRVEKLAKTQKCWRSNDAVQDGYRQRLGEEYKPFGSGRLHESLDSIPFID
EPSSPSADLDDTQFRVCTVVSAVPPSPASSSAILHRQFSHDQDSLRFTVLDSDSGTKTER
SKSYDEGLDNYREEGRGKLIKHIGLSGLRKAVDRSSEDSGSRRNSLSDVFVNATKEGVLH
FRQFSSDKGKRVGGGMRTWKQMYAVLRGHSLYLYKDKKEGQTPNSHTEEEPVSISIKSCL
IDISYSDTKRKNALRLTTSDCEYLFQAEDREDMLAWIRAIQENSNLDEENALITSTDLIN
RKIKEYNTLMSPPSNKTESSPRSSRQSLSIRHTLLGGNKTPSPHSPHKEQERRITHRDEA
SPPKDKGLRRKGIPGLMRKPFEKKVTPGVTFGARLDDCPPAHTNRFVPLIVEVCCKLVEE
RGLEYTGIYRVPGNNAAISSMQEELNRGVGEIDVQEDKWKDLNVISSLLKSFFRKLPDPL
FTNEKYGDFIDANRTEDPVERLKVLKRLLHELPDHHYETLKFLSAHLKTVAENSEKNKME
PRNLAIVFGPTLVRTSEDNMTHMVTHMPDQYKIVETLIQHYDWFFTDEGEEEPETVVQTE
CAVETQPIPNIDHLLTNIGRTGVSPGEVSDSPTSDSAKSKGSWGSGKDQYSRELVSSIFA
AANRKRKKPKEKLHASSSDDDLDAVFIESELQNPKQIEPDLSGDSHDGNEPEKTPKGRKE
HRNSFFLKKPSPSKISESQKYSTLPSLRLRNPAPSKSSTSEPPSQVEDLGATNPGTCRSR
NRLRIWDIVLPSATDLPPTGSVGGSATAEVSSITSDYSTTSSMTFLTGAESSVLSADLQS
RGGDEADDERSELISEGRHVETDSETEFPVFLRGTTTPVTPSEIVPRKSECTNVQKPLNR
YILASQKLTAFNTSKRRSLHQKTDSESSLEVGAGRESERMSRSEPSRLSRVLEAVKKGRS
VGSISSASSSSHSQAEPTKRLSITERLKSHFRSSADDMFGIGGQKNSRKKEKRVRRRHTL
GGQRDFAELAVINDWREQGGTEKGAELSDADRLKLQNSREISIRDWITRERWHPGSLRAG
SQGSKVVTGTDEGSSCPASTLSRQSSLDQLNGGEPKCKGKANLNSGADAHPHKLSGAQVV
RSQFYQCL
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgacgcgtcggggtgatgacggggtgcgcgcagccgcatcgccagcgtctgag
tgtaagaaggatggccatgatccgagtgagctgtcccccgtgtcccccatgtcccccatg
tcccccgcacccatggaccagctcttctcctggcctggacctaaaaccctgcacctgcac
cgaacctcacagggcttcggcttcacgctgcgccacttcatcgtctacccacccgagtcc
gccgtacactccacgtttaaggatgaagacaatggaagtcgagggagaccgcggtgtcgt
cttgagccaatggacactatctttgtgaagcaggtgaaggagggaggctccgcacaccaa
gctggactctgcacaggtgatcgtatagtgaaggtgaacggtgagagcatcatcggcaaa
acatattcacaagtcatcgctctcatacaggacagtgacgtgtctctggagctctgtgtg
atgcctaaagatgaagacattttgcagttgttctcccgggacatcaccgctctggcctat
tccaaagacgcatatctgaaagggaacgaagcgtatagtggaaatgcgcagaacatccca
gaacctccatctatctgctacacgcggatagagcctaaaacgtcagggatgacgcacacc
gatgagccttctgctccctcaggagctcatggagtgttatccccgggggcagagccaagc
tctgatgtgggccattgtgtggaagtccatatgacacaattgtctccatctcctcctggc
tcgcaggtctccagactccagaatgctgcttgtgtatatgatgaaagcgtgcgtgtggca
ggagtggaggtttccaattccctggaatgttctcctcgcccttacggctcaaacactaac
cacaggttgcaggagacaaaaaacacaccgctttgtacctcgtcccttgaaaacctttcc
tcggtccgtccgagatcccagaccacaccttgttcttctttcgctagagggacaaagttg
caccacacaccgcaaggaccgtcagaatcaccgggattctccacacacattaatatacac
actccttttcaccctgactccacatctactccatccagtcgacatgccatgagcccattc
acgccctctcctccagctattgcgtcatctccctgctccccaatgcatcagaacatcgac
tggaggaattacaccacctacaaggagtacattgacaacaagcgcctctatacctatggc
agcaggaccatccaagaaagactagacagcctgcgggcagcaagccaagctgataaagca
aacgcaagtacagagggcatgaatttatcccagccaaggcagaggagcacctgtcacgag
agaggtcctgcaaattctggggtccagtctctttgcagtgtgtctcaggaaagactggaa
gtaaaggaacgagcaacgtcaagggattggcatcgaagcgcttcacaagatgcgcttcct
tcatccacaaagagcacatacaaaccacgggcgagatcttgcgactacctgggcagacag
gctgagagcagggtctcgctgatggacaggagggtttatggaaggacagagacggaggag
aaggcacgtatttgcactgaagaggagaccagaggctgcaggcagtcactctccttaggc
aaagtggcacagactcaaaggaccttggtgggtgggtatggcagtttcccaggactaaat
gctaaaattaaaggtacagatccaattctgagctccagagtgcagagtctggataatact
gctgcttcgaaggcacagctccgctttcagacatctgttttggatgactcctacgtagcc
agggctctcgcttccttaaacatgggtctcaccacagcctcagtgaccacgaaaaaccaa
agaactggccttgtgcccaatcacatgtctcccggatggcaaaccaagagccatcaggag
cccgttggttccgttccttgccctgactactccaaagatagtagcaggacacagcaggat
gggtcttcagtagccactaatggcttagttgcgggaggtctcgaaggcgcagaggccaca
gtcgtggtggtgaagagggagaaaacaaaaaagtcaggtcctttacctctcagacacccg
tcctatatccaggctgtgaacgatggagcaggtagagtggagaaactcgcgaaaacgcaa
aagtgctggaggtccaatgatgctgttcaagacgggtacagacagcggcttggagaggaa
tacaaaccctttggatctggccgactgcacgagtctctcgactccatccccttcattgac
gagccgtccagccccagtgctgaccttgatgacacacagttccgcgtttgcaccgtcgtc
tccgctgttccgccaagccccgcctcctcttccgccatccttcaccgccagttctctcac
gatcaagactcgttgcggttcacagttctggattcagattccggcactaaaaccgagcgc
tccaagtcctacgacgagggactggacaactacagggaagaaggacgagggaaactgata
aagcacatcggtctgagtggacttaggaaggctgtggatcggtcctcagaagattctggc
tccaggagaaactctttgtcggatgtctttgttaacgctactaaggagggagtcctgcac
ttccgccagttcagctcggacaagggcaagcgtgtaggcggcggcatgcggacgtggaag
cagatgtacgccgtgctccgtggccactccctctatctgtacaaggacaagaaggagggg
cagacaccaaactcgcacacggaggaggagcctgtgtccatcagcattaagtcctgtctg
atcgacatctcctacagcgacacgaagaggaagaacgccctgagactgaccacgtcggac
tgtgagtacctgttccaggccgaggacagagaggacatgctggcctggatacgagcgatt
caggagaacagcaacctggacgaggagaacgcactgattacaagcacagacctcatcaat
cgcaaaatcaaggagtacaacactctgatgagtccacccagcaataagaccgagtcgtcc
ccaaggtcctctcgtcagtctctgagtatcagacacactctgctgggggggaataaaacc
ccgagccctcactcaccccacaaggagcaggagaggagaatcacacacagagatgaagcg
agcccaccgaaggataagggactgcggaggaaagggatcccgggactgatgaggaagccg
tttgagaagaaggtcactcctggagtgacgttcggcgcgagactggacgactgtcctcct
gctcataccaacagatttgtacccctgatcgtagaggtgtgctgtaagctcgtagaggag
aggggtctggagtacacggggatttaccgagtgccggggaacaatgctgccatctccagc
atgcaggaggaactgaacagaggcgtgggagagatcgacgttcaggaggacaaatggaag
gacctcaatgtgatcagcagtttattaaaatcgttcttccggaagcttcctgatcctctc
ttcaccaacgagaaatatggagacttcattgatgcgaacagaacagaggatccagtggag
aggctaaaagtactgaagaggctgcttcacgagttgccggatcatcactacgagacgctg
aagttcctctcagctcacctgaaaactgtggctgaaaactctgagaagaacaagatggag
ccacggaacctggccatcgtgttcggtcccacgctggtgcggacgtctgaagacaacatg
acacacatggtcacacacatgcctgatcagtacaagattgtggagacactcattcaacat
tacgactggttcttcactgatgagggagaagaggaaccggagacggtggtccagacagag
tgtgcagtggagacgcagcccattcccaacattgaccacttgctcaccaacatcggccgc
accggcgtctctccgggagaagtgtcagattcacccactagtgattcggccaaatcgaag
ggttcatgggggtcggggaaagaccagtacagccgcgaactggtctcctccatctttgct
gcagctaaccgcaaacgcaagaagcccaaagagaagctgcatgctagcagctccgatgat
gacctggatgctgtttttatcgagagtgagctgcagaacccgaaacagatagagccggat
ttatcaggagactcacatgatgggaatgaacctgaaaaaacacccaaggggcgcaaagag
cacaggaactccttcttcttgaagaaaccgtctccctctaagatctctgaatcccaaaaa
tactctacactgcccagtctccgcctccgaaatccagccccttccaaaagctccacatcc
gaaccaccttctcaggtggaagaccttggcgccacgaacccaggaacatgcagatccagg
aatcggttgagaatttgggacatagtattgccatctgccacagatctacctccaaccggg
tctgtcggaggatcagccacggcagaagtgagctctatcacttcggattactcgaccacc
tcctccatgactttcctgacgggggcggaatcgagcgtgctcagtgcggatttgcagagc
cggggcggagacgaggccgacgacgagcgcagcgagctgatcagcgagggacgacacgtg
gagacggacagtgagacggagtttcctgtttttctcagaggcacgacgactcctgttacc
ccatccgagatcgtccctagaaagtcagagtgtactaacgttcaaaaacctttaaaccgc
tacatcctggcttcgcaaaagctgacggcgttcaacacgtccaagaggcggtccttgcac
cagaagacggacagcgaatcgtcgttagaagtcggagccgggcgagagagcgagaggatg
agccggagcgaaccgagccgtctgtctcgcgttctggaagcggtgaaaaaaggccgttcg
gtgggaagcatcagctccgcctcttcctcctcccacagccaggcagagccaacaaagcgc
ctgagtatcaccgagaggttgaagtcccacttccgctcatccgcagacgatatgtttggt
atcggagggcagaaaaacagcagaaagaaagagaaaagagtccgtcggagacacactctg
ggtgggcagcgggactttgccgaactcgcggtcattaacgactggcgtgaacagggtggt
accgagaagggggcggagctttcagacgcggaccggctcaaacttcaaaactcgagagag
atttccattcgggactggatcacccgcgagcgttggcatcctgggtctttgcgggctggt
tcacaggggtcaaaggtcgtgacggggaccgatgaaggttcgagttgtcctgcttctacg
ctaagtcgccaatccagtctggatcagttgaacgggggggaaccaaagtgcaaaggcaaa
gccaacttgaactcgggcgccgatgctcacccacataaactttccggggctcaagttgtg
cgctcgcagttctaccaatgtctgtaa
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integrated database retrieval system
