Ictalurus punctatus (channel catfish): 108267672
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Entry
108267672 CDS
T04658
Name
(RefSeq) thyroid receptor-interacting protein 6
KO
K12792
thyroid receptor-interacting protein 6
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
108267672
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Gene cluster
GFIT
Motif
Pfam:
LIM
zf-dskA_traR
Motif
Other DBs
NCBI-GeneID:
108267672
NCBI-ProteinID:
XP_017327468
Ensembl:
ENSIPUG00000000532
UniProt:
W5U7B5
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Position
7:21956339..21967040
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AA seq
573 aa
AA seq
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MSGPTWLPLRTLSSPERPAAQMSHSGPAFYRPPKKGPPDQRAKYGVYDQNGAAGGNGVPS
RYIATGPSGGSMHHQHQDGYSGSSSYHPLSPQGEHYYLPGHGPKDDHLFWNTHMTSYDHH
TRGSDKHLSSIDAEIDSLTCMLADMDSHHQNTSTQSTQLYDNVPYNKHLHSERYKPSNQT
GAPSQTRPTMGYPPHPQSQYHPSPPYQSTPKPEYAYPSQSSSTHKPYPQPVPASYTTAST
PSGPRFTVQVKTAQPVTYSQSGRQAEQAYTPPPPRQHATCPPPHYSEVPGQGQGWYPPPP
PPAQQAHGDPAAYKAGSGGIQVPSRVQGQPGKKGQEQSYQTSKGPVPRPEEELDRLTKKL
VYDMNHPPTEEYFGRCARCGDNVLGDGSGCIAMEQVFHVECFTCITCHAQLRGKPFYALD
KKSYCESCYISTLERCSKCSKPILDRILRAMGKAYHPRCFTCVVCGCCLDGVPFTVDATS
QIHCIEDFHRKFAPRCSVCGEPIMPEPGQEETVRIVALDRSFHVNCYICEECGLLLSSEG
EGRGCYPLDGHILCKSCSARRIQDLSAKISTDC
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtcctacctggctgcctctgagaactctgagtagccctgagagacccgcagca
cagatgtcacactctggacctgctttctacagaccacccaaaaaaggtccacctgaccag
agagccaaatatggtgtgtatgaccaaaatggagcagcaggtggaaatggtgtaccctca
aggtacatagccactggaccctcaggtggaagcatgcatcaccagcaccaagatggttat
tcagggtcttcatcctatcaccccctttctccacaaggagaacactattatctcccagga
cacggacccaaagacgatcatctcttctggaacacacacatgactagctatgatcaccat
acacgagggtctgataaacacctctctagtattgatgccgagatagattctctcacatgc
atgctggctgacatggacagccatcatcaaaacacaagcacacagtccacacagctgtac
gacaacgtgccttacaacaagcatcttcacagtgagcgctacaaaccgtccaaccagaca
ggtgctccgtcccagaccagacccaccatgggttaccctcctcatcctcaaagccagtat
catccttctccaccttatcagtccaccccaaagcctgaatatgcctatccgtcccaatcg
tcctccacacacaaaccttacccccaaccagtgccagcctcctacaccactgcctccacc
ccgagtgggccacgcttcaccgtgcaggtcaaaaccgctcagcctgtcacttattctcag
agtgggagacaagcagagcaggcctacaccccgccccctcctcgccagcatgctacttgc
cctcccccacattactcagaagtcccagggcagggacaaggctggtacccaccaccacca
cctccagcccagcaggcccatggtgatccagcagcatataaggcaggctctggtggtatt
caggtgccaagtagggtacagggtcaaccaggaaagaaaggacaagagcagagctaccag
actagtaaggggccagtgccaagaccagaggaggagttggatcgcctcactaagaagctg
gtgtatgacatgaatcatcctcccacagaggaatacttcggccggtgtgccaggtgtggc
gacaacgtgctcggtgatgggagcggctgtatcgctatggagcaggtgttccatgtggag
tgtttcacgtgtatcacctgccatgcccaactcagaggcaagcctttctatgcactggac
aaaaagagctactgtgagagctgttacattagtacattggagcgctgctcaaagtgttcg
aaaccaatcctggaccggatcctgcgggcaatggggaaggcatatcacccacgctgcttc
acctgtgtagtgtgtggctgctgtcttgatggtgttcccttcaccgtggatgccacttca
cagattcactgcattgaggatttccacaggaagtttgccccaagatgctctgtgtgtggg
gagcccataatgcctgagcctggtcaggaggagacagtgagaattgtggctctggatcgc
agtttccatgtcaactgctacatttgtgaggagtgtggtttgctcctctcgtctgaagga
gagggccgaggctgctaccctctggatggtcacattttgtgcaagagctgcagtgcccga
cgaatccaggatctctctgccaaaatctccactgactgctaa
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