KEGG   Ictalurus punctatus (channel catfish): 108267876
Entry
108267876         CDS       T04658                                 
Symbol
per1b
Name
(RefSeq) period circadian protein homolog 1b
  KO
K21944  period circadian protein 1
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ipu03400]
    108267876 (per1b)
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    108267876 (per1b)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 108267876
NCBI-ProteinID: XP_053537371
UniProt: A0A9F7RII8
LinkDB
Position
7:20127587..20156167
AA seq 1436 aa
MSDDNSDSAPSNDSRVRAGRAEEEEEVLPQTSSPGMSGSSPSSNPANGRTGSSLGGESGP
AGLSSDNRGQNSDDMDALSSGNDSGERESEGGLERENGSRGRQSMRSYQSSSSHNGKDSG
MMLETTESNKSTNSQSLSPPSSSLAYSLLSAGSEQDPSSTSGCSSEQSARVQTQKELMRA
VKELKIRLPAEKKTKGRSSTINALKYALSCVKQVQANQEYYHQWKVEECHGCSLDLSTFT
IEELDNITSEYTLKNTDTFSMAVSFLSGKVVYISPQGSSLLRRKPEKLQGALFSELLAPQ
DVSTFYSSTAPCRLPTWASCIGSVSPPVECTQEKSMFCRISADGSSSGDMRYYPFRLTPY
LLTLRDSDIADPQPCCLLIAERVHSGYEAPRIPPDKRIFTTSHTPSCLFQEVDERAVPLL
GYLPQDLVGTPVLLCLHPEDRPMMVAIHKKILQFAGQPFEHSPLRMCARNGEYLTIDTSW
SSFVNPWSRKVAFIVGRHKVRTSPLNEDVFTLPRALEESALTPDIAQLSEQIHRLLVQPV
HSSSSQGYGSLASNGSHELQPSAASSSESNGTTLEDPAQLHKPMTFQQICKDVHMVKTSG
QQVFIDSRNRPPPRKHTATGSLRAIVDTVTDVAPPSKDPVLSQLVRKDPPSAYSYQQINC
LDSIIRYLESCNVPNTVKRKCGSSSCTASSTSDDDKQQVTPSNPKGPSVALVSESTSLPA
LTLHSKAESVASVTSQCSFSSTIVHVGDKKPPESDIVMEEAPTTPIPAPPVLHTLPPPPP
PPPPAIAAAPSLPPPPTPPSPAVTTERDGVRRGGAAAAAGGGRLGLTKEVLSAHTQQEEQ
NFLCRFRDLSQLRVFDPASVLRRHTTTPITRGARCSRDYPTMSNSGRRRGRGGKRLKHQE
TSEQGTSLGQSGPTGTLSTGALAQDGVPNASFPLAPPTTSSSWPPSVGSQNSLPSVPYPP
GMLPFYPLYPPLTHPITDPSIHTGLRFPIQNPQVAPPMVPPMMALVLPNYMFPQIGTTMA
QPVAATMSQPFYNPTVSFQYPTASTAPAAPTQTITPAPRIPSRCSTPQSYSQREGGVERE
GTESPLFQSRCSSPLNLLQLEESPTSRLEAVTALASGQQATPPAGGQAGGVGGPAAANQR
GAADSKENENGEANESNQDAMSSSSDLLDLLLQEDSRSGTGSAASGSGSSGTGSSGSGLG
SSGSGSNGCSSSGSGTRSSQSSHTSKYFGSIDSSENDHSRKQTAGGNGEAQFIKCVLQDP
IWLLMADTDEKIMMTYQLPIRDRQTVLSEDSVALRAMQKHQPRFTEEQKRELSRVHPWIR
TGRLPRAINISGCVGCKSPPSVPPAAPFDVEIHEMELCSVLDVTEDGTSGEKHMQPETAM
DVREAQHRIDADEEEKGQARMTTLVSDQEMAAEEQEVTSQMEDEEEKGGHATDMRH
NT seq 4311 nt   +upstreamnt  +downstreamnt
atgagtgatgacaactcagactccgcccccagcaatgattctagggtgcgagccggaaga
gctgaggaggaagaagaggtgctgcctcagaccagctcaccgggcatgagtggcagctca
ccgtcatcaaatccagccaatggcaggacagggtcatctctgggaggcgagtcaggaccc
gcaggtttatccagtgataaccgggggcagaattcggatgatatggacgcgctatcgagc
ggcaacgactctggagagagggagagcgaaggagggctggagagagaaaatggctccagg
ggccgacagtccatgcgaagttaccagagctcttcaagtcataatggcaaagattctggc
atgatgttggagaccactgagagtaacaagagtacaaattcccagagtctgtctcctccc
agcagctcactggcgtacagtttgttgagtgcaggctcagagcaggacccttcatccacc
agtggctgcagcagtgagcagtcagctcgcgtgcagacccagaaggagctgatgagggca
gtgaaggagctcaagattcgcctacctgctgagaagaagaccaaaggacgctccagcacc
atcaacgccctcaaatacgcccttagctgcgtcaaacaagtccaagctaatcaggagtat
tatcaccagtggaaagttgaagagtgtcatggctgcagtctggatctttccacatttacc
atagaagagcttgataacattacctcagaatatacgctgaaaaacacagacacattctcc
atggctgtgtcattcctgtcggggaaggtggtgtatatctcgccgcagggttcatctttg
ttgcgacggaaaccagagaagctgcaaggggcactgttttcagagctcctcgcccctcag
gacgtcagcactttctacagcagcactgctccctgcagactaccgacatgggcctcctgc
atcggatctgtgtctcctccagtggagtgtacccaggagaagtccatgttctgcaggatc
agcgcagatggctcttccagtggagacatgcgctattacccgttcaggctgaccccgtac
ctgctcacactgcgagactctgacatcgcagacccccagccctgctgcctgctcatcgct
gagagagtacactctggatacgaggctcctcgtatacctccagataagcggatctttacc
accagtcacacacccagctgtctcttccaggaggttgacgagagagctgtgccactgctg
ggttatctgcctcaggacttggtgggaaccccagtgctgctctgtctccacccagaggac
agaccaatgatggtggccatccataagaagattctgcagtttgcagggcagccgtttgaa
cactctccgttgcgaatgtgtgcccggaatggagagtatctgactatcgacacctcctgg
tcctcctttgttaacccttggagcaggaaggtggcattcatcgtgggtcgccacaaagtc
cggacttctccactgaatgaggatgtgttcaccttgccgcgggctctggaggaaagcgcc
ttgactccggatatcgcacagctcagcgagcagatccaccggcttctggttcagcccgta
cacagcagcagctcacagggctatggcagtctggcaagtaatggctcccatgagctgcaa
cccagtgccgcttcatcatcagagagcaacggcaccactctggaggacccagctcagctt
cacaaaccaatgaccttccagcagatctgtaaggatgttcacatggtaaagacgagtggc
caacaagtgttcatcgattcccgtaaccgcccccctcctaggaaacacactgccacaggt
tctttgcgagctatagtagacactgttacagatgtggccccaccctcaaaggatccagtc
ctctctcagctggtgaggaaggacccgcccagtgcatactcttaccagcaaatcaactgc
ctagatagcattatacggtatctggagagctgtaatgtcccaaacacagtaaagaggaag
tgtggctcctcctcctgtaccgcgtcctccacttctgatgatgataagcagcaagtcacc
cccagcaaccctaaaggtccgtcagtagctctggttagtgagagtacatcgctgccagcc
ctgactttacacagtaaggcagagagtgtagcatcagtaacgtcgcagtgtagtttcagc
agtaccattgtccatgtgggagacaagaaacccccagagtcagacattgtaatggaggaa
gcccctacaactcctatacctgctcctcctgtccttcatactcttcctcctcctccgcct
cctcctcctccagccattgcagctgctccttctcttccccctccaccaactccaccaagc
ccagcagttacaactgagagagatggagtcaggagaggaggagcagcagcagcagcagga
ggaggaaggctgggactgaccaaagaggtgctttctgcacatactcagcaagaggagcag
aacttcttgtgtcggtttagggatctgagtcagctgagagtgttcgacccagcttcagta
cttcgccggcataccaccacaccaatcactagaggtgcgcgctgttcacgtgattacccc
acaatgagcaacagtggtcgtcggcgtggtagaggtggtaagaggttgaaacatcaggag
acctcggagcaggggacctctttaggccagtcaggcccaacaggaaccctctccacaggt
gcacttgcacaagacggagtgcctaacgcttccttccctctggctcctccaacaacctca
tcttcttggcctccttcagtgggctcccagaatagcctgccctctgtgccctatccacca
ggcatgttgcccttttatcccctctacccacccctcactcaccccatcactgacccctcc
atccatactggccttcgctttcccattcagaatcctcaagtggcacctcccatggtgccc
cccatgatggcgttggtacttcccaactacatgtttccacaaattggcacaaccatggcc
cagcctgttgctgcaactatgtctcagcccttctacaaccccacggtgtcttttcaatac
cccacagcgagcactgcccctgcagcacccactcagacaataacaccagccccaagaatc
ccatcccgctgtagcacacctcagtcctacagccagagggaaggaggggtggaaagagaa
gggacagagtcacccctttttcaatcccgatgctcctcccctctgaatttgcttcagctg
gaggagtcgccaaccagtcgcctcgaggcagtgacagcactggcctctgggcaacaggcc
acacctcctgccggtggacaagcaggcggggttggaggaccggcagcagccaatcagaga
ggtgcagcagactccaaagagaatgaaaatggagaagccaatgaatcaaatcaggatgcc
atgtcctcctccagtgatctgcttgacctgctgctgcaggaggactcacgatcgggcaca
ggctcagctgcctcaggctctgggtcctcaggcacagggtcctcaggatctggtttaggt
tcctcagggtctggctccaacggatgcagcagctctgggagtggaacgagaagcagccag
agcagccacacgagcaagtactttggcagtatagactcttctgagaatgaccactcgcgt
aagcagacagcagggggcaacggagaagcccagttcattaagtgcgtactgcaggatccc
atctggctgcttatggccgacacagatgagaagatcatgatgacctatcaactgcccatc
agagacagacagactgtactgagtgaggacagcgttgcattgagagccatgcagaagcat
cagcctcgttttactgaggaacagaagcgggagctgagtcgggttcacccctggatccgc
acaggacgcctgccacgtgccatcaatatatccggatgtgtgggctgcaaatctcctcct
tcagtgcctcctgctgccccctttgatgtcgagatccatgagatggagctgtgcagcgtg
ctcgacgtgacagaagatggcaccagcggcgagaaacacatgcagccagaaacggctatg
gatgtccgagaggcacagcatcggatagatgcagatgaggaagagaaaggacaggccaga
atgaccacactggtcagcgatcaggaaatggcagctgaggaacaagaagttacctcacaa
atggaggatgaagaggagaaaggaggccatgcaactgatatgagacactga

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