Ictalurus punctatus (channel catfish): 108268297
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Entry
108268297 CDS
T04658
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1A
KO
K03158
tumor necrosis factor receptor superfamily member 1A
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04060
Cytokine-cytokine receptor interaction
ipu04150
mTOR signaling pathway
ipu04210
Apoptosis
ipu04217
Necroptosis
ipu04920
Adipocytokine signaling pathway
ipu05132
Salmonella infection
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108268297
04150 mTOR signaling pathway
108268297
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108268297
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108268297
04217 Necroptosis
108268297
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
108268297
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108268297
09171 Infectious disease: bacterial
05132 Salmonella infection
108268297
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ipu04050
]
108268297
04090 CD molecules [BR:
ipu04090
]
108268297
Cytokine receptors [BR:
ipu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
108268297
CD molecules [BR:
ipu04090
]
Proteins
108268297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
Motif
Other DBs
NCBI-GeneID:
108268297
NCBI-ProteinID:
XP_017328669
Ensembl:
ENSIPUG00000007897
UniProt:
A0A2D0RDR5
LinkDB
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Position
1:complement(16996414..17003410)
Genome browser
AA seq
387 aa
AA seq
DB search
MESRHHTGKWKKICAPCILFLLTVLRQCDATEGHKNFNNTGSCLENEYLHGEFCCDKCPP
GFKLTRKCKGSGLRSECVKCSPGSYQDNMNHFQNCFSCRTCNPASNEIELAECTHMQDRK
CGCKQGFYQEVLDDITMSCVPCRKCGVGEMETRSCNGQMNTECECKYNHYRVAKRICAQC
TNCSSKCSDLCTHGVKTTPPSHPKSGYPLQTIVVLVWVCLCLVIGLPCIVSLYKGIKHWK
KRKQNQYSQSSESHDPEKQGKETHKCVQSKDDVSRLLPVQPDPVLPDCIPREIKTHEFVY
LVLEIVPVSRFKELVRRLNVSEQDIGRAERDNRAFADAQYQMLMVWVDSGTRGGKSILPH
SLFQECVDRLKDMNLTACAESIEDKYA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcaggcaccacacggggaaatggaaaaagatatgtgcgccatgcattttgttt
ctgctgactgttttaaggcagtgtgatgctacagaagggcacaagaactttaacaacaca
gggtcatgtttagagaacgagtacctgcatggtgaattctgctgtgataaatgtccacca
ggatttaaactaacacggaagtgcaaaggatcgggcctaaggtcagagtgtgtgaaatgc
agccccggatcatatcaagacaacatgaaccatttccaaaactgcttctcatgccgtaca
tgcaacccagcgtctaatgaaattgagctagcagaatgcacacatatgcaagatagaaaa
tgtggctgtaagcaaggattctaccaagaagtattagatgatattacaatgtcatgtgta
ccctgtcgaaagtgtggagttggtgaaatggagaccagatcatgtaatgggcagatgaac
accgagtgtgaatgcaaatataaccattatcgtgtggctaaaagaatctgtgcacaatgc
acaaactgcagttctaagtgtagtgacctgtgcacacatggtgtcaagactacgcctcct
agccatcctaaatcaggttatcctttacagacaatcgtcgtgcttgtgtgggtttgtctg
tgtttggtaattggtttgccttgcatagttagcttgtataaaggaattaaacactggaag
aagcggaagcaaaatcagtacagtcagtcatccgagtcacatgacccagagaagcaaggg
aaagaaacacataaatgcgtacaaagcaaagatgatgtaagcaggctgttaccagttcag
ccagaccctgtgcttcctgattgcattcccagagagatcaaaactcatgagtttgtttac
cttgtgctggaaattgtcccggtcagtcgctttaaggagctggtgcgtcgtctgaacgtc
tctgagcaggacattggcagggcagagagagataaccgagcgtttgctgatgcccagtac
cagatgctgatggtttgggttgacagtggcactagaggagggaaaagcatcctgccacac
tcactatttcaggaatgtgtggacagactgaaggatatgaatttgactgcttgtgcagaa
agcatagaggacaagtatgcctga
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