Ictalurus punctatus (channel catfish): 108269012
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Entry
108269012 CDS
T04658
Name
(RefSeq) lysosome-associated membrane glycoprotein 2 isoform X1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04140
Autophagy - animal
ipu04142
Lysosome
ipu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108269012
04142 Lysosome
108269012
04140 Autophagy - animal
108269012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108269012
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108269012
04090 CD molecules [BR:
ipu04090
]
108269012
Membrane trafficking [BR:
ipu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
108269012
Other autophagy associated proteins
RNautophagy/DNautophagy
108269012
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
108269012
CD molecules [BR:
ipu04090
]
Proteins
108269012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp
Lamp2_2nd
VAS1_LD
DUF6366
Drf_FH1
Motif
Other DBs
NCBI-GeneID:
108269012
NCBI-ProteinID:
XP_053538205
Ensembl:
ENSIPUG00000019154
UniProt:
A0A9F7R3K5
LinkDB
All DBs
Position
8:7705719..7712094
Genome browser
AA seq
427 aa
AA seq
DB search
MSRWVCLFILLPLYVLGQADVEDVDRSTSLFPTDQPIWEDTPATTILPTTKGSDNAVAVI
TTTTTPEPDVPITTTFQPTPDSDAEGTTQQSNVTTVAPTTPLQLINSTTALPTPLPTNST
TALPTPLPTNSTTALPTPLPTNSTTALPTPLPTNSTTALPTPLPTNSTTALPTPLPTNST
TALPTPLPTNSTTALPTPLPTNSTTTPLPTNSTTASAPTTIPLPKVGDYVVRAEWNSSAC
LMARMGLQFSFRMGDSFQTINLDPNVTTTNGTCGNNDSTLMLRADTTIVQFIFTNQTSKF
FLSALTLTVLAGSGVSFKDGSSNLSLWEASLGSSYMCKKEQSFNITENLILNTFELQVQP
FGVMNDQFNTAHECSVDDTSLLIPIIVGAALAVLILIVVIAYVIGRRKTYVGYQTLLDVA
ENHSPHL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgctgggtttgcctgttcattttgctccctttgtatgttcttgggcaggctgat
gtggaagatgtcgacagaagcacaagcttatttcccactgatcagccaatttgggaggat
acccctgcaactacaatcctacctaccacaaaaggctctgacaatgctgtagcagtgatt
accaccaccaccacccctgagcctgatgtgcccatcactacaactttccagcccactcca
gacagtgatgcagaaggaacaactcagcagtctaatgttacaactgttgcaccaactact
ccacttcagctcatcaactccacaacagctcttccgaccccgctgcccaccaactccaca
acagctcttccgaccccgctgcccaccaactccacaacagctcttccgaccccgctgccc
accaactccacaacagctcttccgaccccgctgcccaccaactccacaacagctcttccg
accccgctgcccaccaactccacaacagctcttccgaccccgctgcccaccaactccaca
acagctcttccgaccccgctgcccaccaactccacaacagctcttccgaccccgctgccc
accaactccacaacgaccccgctgcccaccaactctacgacggcctccgctcctacgact
atcccactgccgaaggttggagattatgtcgtccgggctgagtggaactcctctgcgtgt
ctgatggcaaggatgggtttgcagtttagcttcagaatgggagacagttttcagacaata
aatctcgacccaaatgtgactacaaccaatggaacttgtggaaacaatgactctacactt
atgctgagagcagacacaactattgtccagttcatcttcaccaatcaaacaagcaaattc
ttcttgagtgctttgaccttgactgtgttggctggaagtggtgtgtccttcaaggatggc
agttctaacttatctctatgggaggcatcactggggagctcatacatgtgcaaaaaggag
cagagcttcaacatcacagagaaccttattttgaatacgtttgagctccaagttcagcca
tttggagtcatgaatgaccaattcaacacagcccatgaatgctcagtggatgacaccagc
ctcttaatcccaatcattgttggcgcagctctggctgtcttgattctcattgtagtgatt
gcatatgtgattggtcgacgaaagacatatgttggatatcagaccctgttggatgttgct
gagaatcattccccccacctgtaa
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